Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.6e-291 1005.4 502 100.0
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 4.2e-42 176.8 428 29.7
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 4.2e-42 176.8 427 30.2
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 5.5e-42 176.4 432 29.4
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 7.1e-42 176.0 422 29.1
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 7.1e-42 176.0 422 28.9
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.2e-41 175.3 425 31.1
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 2.7e-41 174.1 427 30.0
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 3.5e-41 173.7 422 29.4
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.6e-41 173.3 422 29.9
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 6.1e-41 172.9 422 30.1
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 7.9e-41 172.6 422 29.1
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.3e-40 171.8 424 30.9
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 1.8e-40 171.4 424 30.7
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.8e-40 171.4 422 29.4
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 2.3e-40 171.0 437 28.8
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 3.0e-40 170.6 381 31.0
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 3.0e-40 170.6 422 29.1
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 3.9e-40 170.2 422 29.9
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 5.1e-40 169.9 432 28.7
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 6.7e-40 169.5 419 29.4
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.5e-39 168.3 422 28.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.5e-39 167.5 422 28.7
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.3e-39 167.2 435 28.5
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 4.3e-39 166.8 424 30.0
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 4.3e-39 166.8 422 28.9
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 4.3e-39 166.8 426 27.9
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 5.7e-39 166.4 424 29.5
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 9.7e-39 165.6 424 28.5
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.6e-38 164.9 424 27.8
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.6e-38 164.9 475 28.4
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 2.2e-38 164.5 422 28.9
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 2.2e-38 164.5 423 28.8
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 2.8e-38 164.1 424 28.5
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 3.7e-38 163.7 424 29.7
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 6.3e-38 162.9 422 28.7
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 8.2e-38 162.5 442 28.3
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 5.3e-37 159.8 427 29.5
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 6.9e-37 159.5 424 27.6
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 1.2e-36 158.7 431 27.6
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 3.4e-36 157.1 405 28.6
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 4.5e-36 156.8 424 29.5
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 4.5e-36 156.8 422 28.0
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 5.9e-36 156.4 499 26.3
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 2.2e-35 154.5 422 28.0
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 5.0e-35 153.3 430 28.6
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 8.5e-35 152.5 422 27.5
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.2e-34 150.6 432 26.6
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 3.2e-34 150.6 422 26.8
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 4.2e-34 150.2 459 26.8
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 4.2e-34 150.2 422 26.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 9.4e-34 149.1 422 26.5
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.2e-33 148.7 423 27.9
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.2e-33 148.7 422 26.5
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.6e-33 148.3 423 27.9
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.6e-33 147.1 426 28.2
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 6.1e-33 146.4 459 26.6
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 6.1e-33 146.4 423 28.1
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 8.2e-30 136.0 422 28.0
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 8.2e-30 136.0 426 27.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 8.2e-30 136.0 424 26.9
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 8.2e-30 136.0 426 27.2
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 5.9e-28 129.8 424 27.6
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.8e-27 127.1 437 28.8
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 5.0e-27 126.7 256 34.4
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 4.2e-26 123.6 368 27.7
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 2.7e-25 120.9 244 32.4
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.0e-24 119.0 403 26.8
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 3.9e-24 117.1 335 29.9
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.0e-23 114.8 265 32.1
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.3e-22 112.1 343 27.7
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 2.2e-22 111.3 432 28.7
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 1.1e-21 109.0 257 30.7
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 7.7e-20 102.8 186 33.3
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.3e-19 102.1 368 25.8
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.9e-18 98.2 347 25.9
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.7e-17 93.6 422 23.2
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.8e-16 91.7 184 31.0
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 3.3e-15 87.4 248 27.4
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 6.8e-08 63.2 116 29.3
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-07 62.4 92 37.0
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 1.5e-07 62.0 92 37.0
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 1.5e-07 62.0 92 37.0
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.0e-07 61.6 101 35.6
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.3e-06 58.9 143 32.9
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.3e-06 58.9 110 34.5
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 6.3e-06 56.6 93 32.3


User provided reference genes

Program Settings