Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 0.0e+00 1264.6 653 100.0
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 5.7e-31 140.2 180 42.8
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 1.8e-29 135.2 185 40.5
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 1.8e-29 135.2 190 40.0
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 3.1e-29 134.4 181 40.3
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 4.1e-29 134.0 182 42.3
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 2.0e-28 131.7 192 37.0
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 4.5e-28 130.6 194 39.2
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 4.5e-28 130.6 197 37.6
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 5.8e-28 130.2 190 37.9
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 7.6e-28 129.8 195 39.0
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 7.6e-28 129.8 188 37.2
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 1.3e-27 129.0 195 39.5
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 1.3e-27 129.0 181 40.9
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 1.7e-27 128.6 181 38.1
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 1.7e-27 128.6 190 39.5
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 2.2e-27 128.3 195 39.0
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 2.2e-27 128.3 195 39.5
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 2.2e-27 128.3 181 39.8
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 2.9e-27 127.9 198 35.4
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 3.8e-27 127.5 198 35.9
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 3.8e-27 127.5 181 38.1
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 3.8e-27 127.5 174 41.4
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 3.8e-27 127.5 198 35.9
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 5.0e-27 127.1 205 38.5
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 5.0e-27 127.1 207 37.7
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 6.5e-27 126.7 194 39.7
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 6.5e-27 126.7 198 34.3
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 6.5e-27 126.7 198 34.3
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 8.4e-27 126.3 197 37.6
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.1e-26 125.9 226 35.0
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 1.1e-26 125.9 181 37.6
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 4.2e-26 124.0 181 39.2
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 4.2e-26 124.0 172 40.1
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.2e-26 124.0 197 37.1
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 4.2e-26 124.0 183 38.3
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 4.2e-26 124.0 181 35.4
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 5.5e-26 123.6 197 37.1
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 5.5e-26 123.6 197 37.6
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 7.2e-26 123.2 188 35.6
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 9.3e-26 122.9 177 39.0
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 9.3e-26 122.9 182 38.5
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 1.6e-25 122.1 192 35.9
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 2.1e-25 121.7 207 36.2
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 2.7e-25 121.3 183 36.6
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 3.5e-25 120.9 201 34.8
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 3.5e-25 120.9 197 36.5
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 4.6e-25 120.6 191 35.6
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 4.6e-25 120.6 210 36.7
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 6.1e-25 120.2 172 38.4
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 6.1e-25 120.2 199 35.7
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 1.3e-24 119.0 165 38.8
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.8e-24 118.6 174 39.7
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 1.8e-24 118.6 193 36.8
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 3.9e-24 117.5 221 31.7
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 5.1e-24 117.1 201 32.8
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 5.1e-24 117.1 176 37.5
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 6.7e-24 116.7 193 34.7
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 8.7e-24 116.3 181 39.8
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 1.1e-23 115.9 188 33.5
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 1.5e-23 115.5 188 33.5
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 1.5e-23 115.5 172 34.9
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 1.5e-23 115.5 187 36.9
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 1.9e-23 115.2 165 38.2
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 2.5e-23 114.8 176 36.4
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 2.5e-23 114.8 180 36.1
Cre07.g351400 Chlamydomonas reinhardtii HOM05D006199 ORTHO05D006558 4.3e-23 114.0 183 35.5
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 5.7e-23 113.6 197 34.0
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 7.4e-23 113.2 180 36.1
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 7.4e-23 113.2 202 33.7
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 7.4e-23 113.2 162 37.7
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 7.4e-23 113.2 202 36.1
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 7.4e-23 113.2 176 38.6
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 9.7e-23 112.8 176 33.5
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 2.8e-22 111.3 180 35.6
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 2.8e-22 111.3 180 35.6
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 2.8e-22 111.3 178 37.1
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 3.7e-22 110.9 180 35.6
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 4.8e-22 110.5 181 36.5
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 6.3e-22 110.2 189 34.9
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 8.2e-22 109.8 200 35.0
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 8.2e-22 109.8 181 34.8
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 1.1e-21 109.4 176 34.7
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 1.1e-21 109.4 180 35.0
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 1.8e-21 108.6 188 33.5
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 3.1e-21 107.8 199 32.2
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 6.9e-21 106.7 243 31.3
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 9.0e-21 106.3 184 35.3
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 9.0e-21 106.3 181 36.5
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 7.7e-20 103.2 219 34.7
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.3e-19 102.4 162 37.0
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 1.3e-19 102.4 215 30.2
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 1.7e-19 102.1 185 34.1
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.7e-19 102.1 153 39.2
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 2.9e-19 101.3 169 38.5
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 3.8e-19 100.9 200 29.5
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 6.5e-19 100.1 172 36.0
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 1.1e-18 99.4 197 31.0
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 1.4e-18 99.0 214 31.8
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 4.2e-18 97.4 181 33.1
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.0e-16 91.3 151 36.4
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 5.1e-16 90.5 156 35.3
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 1.3e-11 75.9 121 39.7
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 3.8e-11 74.3 133 33.1
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 7.2e-10 70.1 89 44.9
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.2e-09 69.3 145 35.2
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.7e-09 68.2 89 43.8
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 2.7e-09 68.2 164 32.3
CBR_g870 Chara braunii HOM05D006199 ORTHO05D006558 4.4e-07 60.8 195 28.7
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 8.2e-06 56.6 82 39.0


User provided reference genes

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