Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 2.7e-65 251.9 131 100.0
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 6.6e-40 167.5 117 70.1
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 1.9e-39 166.0 116 69.8
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 5.6e-39 164.5 115 68.7
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 5.6e-39 164.5 115 68.7
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 9.6e-39 163.7 115 68.7
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 1.3e-38 163.3 115 68.7
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 1.3e-38 163.3 120 65.8
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-38 162.9 115 67.8
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-38 162.9 115 68.7
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 2.1e-38 162.5 115 68.7
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 2.1e-38 162.5 115 68.7
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 2.1e-38 162.5 114 68.4
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 2.1e-38 162.5 115 67.0
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 2.1e-38 162.5 115 68.7
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 2.8e-38 162.2 116 65.5
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 2.8e-38 162.2 115 67.8
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 2.8e-38 162.2 115 67.0
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 2.8e-38 162.2 114 68.4
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 3.6e-38 161.8 115 67.8
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 3.6e-38 161.8 114 67.5
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 3.6e-38 161.8 115 66.1
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 4.8e-38 161.4 115 67.0
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 6.2e-38 161.0 111 70.3
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 6.2e-38 161.0 115 67.0
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 6.2e-38 161.0 115 67.0
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 6.2e-38 161.0 115 66.1
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 6.2e-38 161.0 115 66.1
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 6.2e-38 161.0 115 67.8
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 8.1e-38 160.6 115 66.1
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 8.1e-38 160.6 115 66.1
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 8.1e-38 160.6 115 68.7
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 8.1e-38 160.6 115 67.0
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 8.1e-38 160.6 115 67.8
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 8.1e-38 160.6 115 67.0
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 8.1e-38 160.6 115 66.1
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 8.1e-38 160.6 114 67.5
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 8.1e-38 160.6 114 67.5
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 8.1e-38 160.6 115 67.8
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 1.1e-37 160.2 115 65.2
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 1.1e-37 160.2 115 67.0
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 1.1e-37 160.2 115 67.8
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 1.1e-37 160.2 121 62.8
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 1.1e-37 160.2 115 66.1
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 1.1e-37 160.2 115 67.0
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 1.1e-37 160.2 114 67.5
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 1.1e-37 160.2 117 65.0
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 1.1e-37 160.2 115 65.2
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 1.1e-37 160.2 115 66.1
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 1.1e-37 160.2 115 66.1
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 1.4e-37 159.8 115 67.0
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 1.4e-37 159.8 115 67.0
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.4e-37 159.8 114 66.7
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.4e-37 159.8 114 66.7
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.4e-37 159.8 114 66.7
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 1.4e-37 159.8 115 67.0
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 1.4e-37 159.8 115 67.0
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 1.4e-37 159.8 116 66.4
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 1.4e-37 159.8 117 63.2
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 1.4e-37 159.8 119 62.2
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 1.4e-37 159.8 114 66.7
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 1.4e-37 159.8 115 67.0
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 1.4e-37 159.8 115 67.0
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 1.8e-37 159.5 115 66.1
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 1.8e-37 159.5 115 67.0
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.8e-37 159.5 116 66.4
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 1.8e-37 159.5 115 64.3
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 1.8e-37 159.5 115 66.1
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 1.8e-37 159.5 115 65.2
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 1.8e-37 159.5 115 66.1
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 2.4e-37 159.1 115 66.1
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 2.4e-37 159.1 115 65.2
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 2.4e-37 159.1 115 67.0
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 2.4e-37 159.1 115 67.0
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 2.4e-37 159.1 115 67.0
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 2.4e-37 159.1 115 67.0
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 2.4e-37 159.1 114 66.7
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 2.4e-37 159.1 115 66.1
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 2.4e-37 159.1 114 65.8
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 3.1e-37 158.7 115 64.3
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 3.1e-37 158.7 115 66.1
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 3.1e-37 158.7 115 67.0
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 3.1e-37 158.7 114 66.7
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 3.1e-37 158.7 115 65.2
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 3.1e-37 158.7 115 66.1
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 3.1e-37 158.7 115 66.1
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 4.0e-37 158.3 115 66.1
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 4.0e-37 158.3 115 66.1
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 4.0e-37 158.3 115 66.1
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 4.0e-37 158.3 117 61.5
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 4.0e-37 158.3 115 65.2
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 4.0e-37 158.3 115 65.2
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 4.0e-37 158.3 115 65.2
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 5.3e-37 157.9 115 65.2
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 5.3e-37 157.9 115 64.3
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 5.3e-37 157.9 115 65.2
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 5.3e-37 157.9 115 65.2
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 6.9e-37 157.5 115 65.2
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 6.9e-37 157.5 115 64.3
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 9.0e-37 157.1 116 64.7
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 1.2e-36 156.8 115 66.1
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 1.2e-36 156.8 111 67.6
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 1.5e-36 156.4 114 64.0
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 1.5e-36 156.4 115 63.5
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 1.5e-36 156.4 114 64.0
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 2.0e-36 156.0 114 63.2
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 2.0e-36 156.0 114 63.2
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 2.0e-36 156.0 114 63.2
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 2.0e-36 156.0 114 63.2
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 2.0e-36 156.0 114 63.2
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 2.0e-36 156.0 114 63.2
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 2.0e-36 156.0 114 63.2
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 2.0e-36 156.0 114 64.0
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 2.0e-36 156.0 115 65.2
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 2.0e-36 156.0 115 62.6
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 2.6e-36 155.6 115 64.3
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.6e-36 155.6 115 63.5
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 2.6e-36 155.6 115 63.5
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 2.6e-36 155.6 114 64.9
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 2.6e-36 155.6 114 64.9
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 2.6e-36 155.6 115 64.3
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 3.4e-36 155.2 114 63.2
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 4.4e-36 154.8 114 62.3
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 4.4e-36 154.8 114 62.3
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 4.4e-36 154.8 114 62.3
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 4.4e-36 154.8 114 62.3
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 4.4e-36 154.8 110 67.3
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 5.8e-36 154.5 115 65.2
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 5.8e-36 154.5 115 61.7
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 9.9e-36 153.7 114 61.4
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 9.9e-36 153.7 114 61.4
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 9.9e-36 153.7 114 61.4
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 9.9e-36 153.7 117 61.5
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 1.3e-35 153.3 111 64.9
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 1.3e-35 153.3 111 65.8
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 2.9e-35 152.1 116 62.1
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 4.9e-35 151.4 100 71.0
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 6.4e-35 151.0 115 62.6
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 8.4e-35 150.6 117 61.5
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.1e-34 150.2 115 65.2
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 1.9e-34 149.4 106 67.0
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 2.4e-34 149.1 121 59.5
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 2.4e-34 149.1 112 64.3
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 3.2e-34 148.7 107 65.4
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 5.4e-34 147.9 106 67.0
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 5.4e-34 147.9 106 67.0
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 7.1e-34 147.5 111 64.9
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 6.0e-33 144.4 127 55.9
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 6.0e-33 144.4 105 67.6
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 6.0e-33 144.4 99 68.7
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 1.7e-32 142.9 127 55.1
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-32 142.9 105 64.8
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-32 142.9 105 64.8
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 5.1e-32 141.4 100 67.0
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 6.6e-32 141.0 111 59.5
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 8.7e-32 140.6 118 59.3
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.3e-30 136.7 99 64.6
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 1.8e-29 132.9 115 59.1
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 1.7e-27 126.3 98 57.1
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.9e-27 125.6 99 61.6
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.2e-25 120.2 111 55.0
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.2e-25 120.2 111 55.0
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 3.5e-25 118.6 116 46.6
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 7.4e-23 110.9 85 61.2
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 3.7e-22 108.6 80 65.0
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.4e-21 106.7 116 50.0
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 2.4e-21 105.9 99 53.5
AagrBONN_evm.TU.Sc2ySwM_368.148 Anthoceros agrestis HOM05D003908 ORTHO05D004488 3.4e-20 102.1 84 63.1
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 3.4e-20 102.1 79 60.8
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 1.7e-19 99.8 73 64.4
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 2.2e-19 99.4 115 47.0
Lalb_Chr20g0122801 Lupinus albus HOM05D003908 ORTHO05D004488 3.8e-19 98.6 66 72.7
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 6.5e-19 97.8 78 60.3
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.3e-16 89.4 61 68.9
SHI24544 Sapria himalayana HOM05D003908 ORTHO05D000023 1.6e-14 83.2 60 66.7
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 1.1e-13 80.5 113 39.8
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 1.8e-13 79.7 57 68.4
Sopen12g012850 Solanum pennellii HOM05D003908 ORTHO05D004488 6.5e-11 71.2 58 60.3
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 4.2e-10 68.6 75 45.3
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 7.2e-10 67.8 50 62.0
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 7.9e-09 64.3 47 61.7
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 7.9e-09 64.3 47 61.7
AUR62011951 Chenopodium quinoa HOM05D003908 ORTHO05D004488 1.5e-07 60.1 34 79.4


User provided reference genes

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