Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 1.0e-163 580.1 306 100.0
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 2.0e-15 87.4 135 38.5
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 2.9e-14 83.6 132 37.1
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 6.6e-14 82.4 132 37.1
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 1.5e-13 81.3 132 34.8
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 4.2e-13 79.7 132 35.6
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 5.5e-13 79.3 130 35.4
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 5.5e-13 79.3 132 36.4
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 7.2e-13 79.0 132 33.3
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 7.2e-13 79.0 132 35.6
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 1.2e-12 78.2 131 35.9
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 1.6e-12 77.8 132 34.8
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 1.6e-12 77.8 132 35.6
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 2.1e-12 77.4 137 34.3
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 3.6e-12 76.6 132 34.8
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 3.6e-12 76.6 150 35.3
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 4.7e-12 76.3 165 32.1
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 4.7e-12 76.3 133 34.6
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 4.7e-12 76.3 132 33.3
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 6.1e-12 75.9 190 33.2
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 8.0e-12 75.5 154 34.4
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 8.0e-12 75.5 192 31.8
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 8.0e-12 75.5 132 34.1
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 8.0e-12 75.5 132 34.1
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 8.0e-12 75.5 132 34.1
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 8.0e-12 75.5 132 34.1
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 8.0e-12 75.5 132 34.1
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 8.0e-12 75.5 137 33.6
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 1.0e-11 75.1 154 34.4
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 1.0e-11 75.1 126 36.5
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 1.0e-11 75.1 126 36.5
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 1.0e-11 75.1 132 33.3
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 1.0e-11 75.1 183 32.2
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 1.0e-11 75.1 171 32.2
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 1.4e-11 74.7 130 35.4
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 1.4e-11 74.7 130 35.4
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 1.8e-11 74.3 181 31.5
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 1.8e-11 74.3 132 34.1
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 1.8e-11 74.3 137 33.6
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 1.8e-11 74.3 193 30.6
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 1.8e-11 74.3 207 30.4
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 2.3e-11 73.9 138 34.1
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 2.3e-11 73.9 132 33.3
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 2.3e-11 73.9 199 32.2
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 3.0e-11 73.6 126 36.5
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 3.0e-11 73.6 155 34.8
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 3.0e-11 73.6 127 35.4
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 4.0e-11 73.2 181 32.6
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 4.0e-11 73.2 157 34.4
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 4.0e-11 73.2 136 35.3
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 4.0e-11 73.2 171 32.2
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 4.0e-11 73.2 132 34.1
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 4.0e-11 73.2 135 34.8
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 5.2e-11 72.8 190 30.0
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 5.2e-11 72.8 169 32.0
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 5.2e-11 72.8 132 34.8
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 8.9e-11 72.0 133 33.8
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 8.9e-11 72.0 186 32.8
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 8.9e-11 72.0 132 34.8
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 8.9e-11 72.0 159 31.4
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 8.9e-11 72.0 159 31.4
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 8.9e-11 72.0 132 35.6
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 1.2e-10 71.6 190 33.7
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 1.2e-10 71.6 217 31.8
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 1.2e-10 71.6 132 31.8
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 1.5e-10 71.2 215 30.2
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 1.5e-10 71.2 190 29.5
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.5e-10 71.2 171 30.4
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 1.5e-10 71.2 191 31.4
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 1.5e-10 71.2 168 33.9
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 1.5e-10 71.2 179 31.3
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 2.0e-10 70.9 138 32.6
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 2.0e-10 70.9 159 31.4
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 2.0e-10 70.9 157 33.1
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 2.6e-10 70.5 176 32.4
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 2.6e-10 70.5 155 33.5
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.6e-10 70.5 168 31.5
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 2.6e-10 70.5 158 32.3
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 3.4e-10 70.1 197 31.0
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 4.4e-10 69.7 129 34.1
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 4.4e-10 69.7 129 34.1
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 4.4e-10 69.7 129 34.1
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 4.4e-10 69.7 129 34.1
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 4.4e-10 69.7 169 33.1
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 5.7e-10 69.3 185 32.4
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 5.7e-10 69.3 190 28.9
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 5.7e-10 69.3 157 33.1
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 5.7e-10 69.3 157 33.1
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 7.5e-10 68.9 126 34.9
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 7.5e-10 68.9 189 28.0
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 9.8e-10 68.6 192 30.7
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 9.8e-10 68.6 184 31.0
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 1.3e-09 68.2 181 30.4
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 1.3e-09 68.2 181 30.4
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 1.3e-09 68.2 216 30.1
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 1.3e-09 68.2 163 30.7
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 1.3e-09 68.2 213 29.6
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 2.2e-09 67.4 205 30.2
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.2e-09 67.4 168 31.5
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 2.2e-09 67.4 188 29.8
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 2.9e-09 67.0 210 29.5
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 2.9e-09 67.0 170 31.2
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 3.7e-09 66.6 174 29.9
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 3.7e-09 66.6 171 31.0
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 3.7e-09 66.6 192 31.2
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 3.7e-09 66.6 192 30.2
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 3.7e-09 66.6 127 32.3
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 3.7e-09 66.6 213 29.1
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 4.9e-09 66.2 168 31.0
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 8.3e-09 65.5 152 30.9
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 8.3e-09 65.5 213 29.1
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 1.4e-08 64.7 148 29.1
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 1.4e-08 64.7 185 30.3
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 1.8e-08 64.3 193 31.1
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 3.2e-08 63.5 209 30.1
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 3.2e-08 63.5 127 29.9
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 2.0e-07 60.8 184 29.9
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 7.8e-07 58.9 123 34.1
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 2.3e-06 57.4 92 37.0
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 2.3e-06 57.4 71 40.8
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 2.9e-06 57.0 97 34.0


User provided reference genes

Program Settings