Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G437 Micromonas commoda HOM05D005102 ORTHO05D006090 2.8e-168 595.5 369 100.0
CBR_g37523 Chara braunii HOM05D005102 ORTHO05D006090 3.4e-09 67.0 190 31.6
PRCOL_00001816 Prasinoderma coloniale HOM05D005102 ORTHO05D006090 7.7e-09 65.9 196 35.7
EL10Ac3g06678 Beta vulgaris HOM05D005102 ORTHO05D006090 5.0e-08 63.2 196 33.7
Sp3g22120 Schrenkiella parvula HOM05D005102 ORTHO05D006090 1.1e-07 62.0 163 35.0
AL3G39760 Arabidopsis lyrata HOM05D005102 ORTHO05D006090 1.4e-07 61.6 163 33.7
AT3G24315 Arabidopsis thaliana HOM05D005102 ORTHO05D006090 1.4e-07 61.6 163 33.7
Atru.chr12.1207 Acer truncatum HOM05D005102 ORTHO05D006090 2.5e-07 60.8 152 34.9
VMungo0540G0767 Vigna mungo HOM05D005102 ORTHO05D006090 2.5e-07 60.8 195 30.8
Carub.0003s2465 Capsella rubella HOM05D005102 ORTHO05D006090 4.2e-07 60.1 201 30.3
Os02g0658900 Oryza sativa ssp. japonica HOM05D005102 ORTHO05D006090 4.2e-07 60.1 157 33.1
SEGI_01035 Sequoiadendron giganteum HOM05D005102 ORTHO05D006090 4.2e-07 60.1 195 29.7
CARHR100410 Cardamine hirsuta HOM05D005102 ORTHO05D006090 5.5e-07 59.7 179 31.8
AUR62018036 Chenopodium quinoa HOM05D005102 ORTHO05D006090 5.5e-07 59.7 195 29.7
Zm00001eb238020 Zea mays HOM05D005102 ORTHO05D006090 5.5e-07 59.7 156 32.7
BcaC06g35682 Brassica carinata HOM05D005102 ORTHO05D006090 7.2e-07 59.3 220 29.5
C07p12060 Brassica napus HOM05D005102 ORTHO05D006090 7.2e-07 59.3 220 29.5
BolC7t41674H Brassica oleracea HOM05D005102 ORTHO05D006090 7.2e-07 59.3 220 29.5
TPR.G17506 Trifolium pratense HOM05D005102 ORTHO05D006090 1.2e-06 58.5 152 33.6
A07p08000 Brassica napus HOM05D005102 ORTHO05D006090 2.1e-06 57.8 220 29.5
BraA07t28587Z Brassica rapa HOM05D005102 ORTHO05D006090 2.1e-06 57.8 220 29.5
ECA247G3419 Erigeron canadensis HOM05D005102 ORTHO05D006090 2.1e-06 57.8 101 36.6
QL06p021548 Quercus lobata HOM05D005102 ORTHO05D006090 2.7e-06 57.4 163 35.0
QL08p018871 Quercus lobata HOM05D005102 ORTHO05D006090 2.7e-06 57.4 163 33.7
THA.LOC104810405 Tarenaya hassleriana HOM05D005102 ORTHO05D006090 2.7e-06 57.4 157 32.5
Ah.10g026170 Amaranthus hybridus HOM05D005102 ORTHO05D006090 3.6e-06 57.0 170 32.4
BraA03t13497Z Brassica rapa HOM05D005102 ORTHO05D006090 4.6e-06 56.6 128 34.4
Sc13g0003090 Simmondsia chinensis HOM05D005102 ORTHO05D006090 4.6e-06 56.6 179 29.6
BcaB06g26613 Brassica carinata HOM05D005102 ORTHO05D006090 6.1e-06 56.2 220 29.1
A03p43600 Brassica napus HOM05D005102 ORTHO05D006090 6.1e-06 56.2 163 31.9
CDE09G0962 Ceratophyllum demersum HOM05D005102 ORTHO05D006090 7.9e-06 55.8 195 28.7
Thhalv10002630m.g Eutrema salsugineum HOM05D005102 ORTHO05D006090 7.9e-06 55.8 179 30.7


User provided reference genes

Program Settings