Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G416 Micromonas commoda HOM05D000001 ORTHO05D002182 4.1e-84 314.7 159 100.0
Cre07.g334650 Chlamydomonas reinhardtii HOM05D000001 ORTHO05D002182 2.1e-08 63.2 77 33.8
Medtr7g098170 Medicago truncatula HOM05D000001 ORTHO05D002182 3.1e-07 59.3 69 34.8
Actinidia30138 Actinidia chinensis HOM05D000001 ORTHO05D002182 6.9e-07 58.2 69 34.8
SEGI_28504 Sequoiadendron giganteum HOM05D000001 ORTHO05D002182 6.9e-07 58.2 111 27.9
Duzib138G0763 Durio zibethinus HOM05D000001 ORTHO05D002182 9.0e-07 57.8 72 36.1
Lj1g0010012 Lotus japonicus HOM05D000001 ORTHO05D002182 9.0e-07 57.8 69 39.1
SMO143G0028 Selaginella moellendorffii HOM05D000001 ORTHO05D002182 1.2e-06 57.4 71 39.4
CARHR003370 Cardamine hirsuta HOM05D000001 ORTHO05D002182 1.5e-06 57.0 71 33.8
ECA238G2247 Erigeron canadensis HOM05D000001 ORTHO05D002182 1.5e-06 57.0 75 34.7
AagrBONN_evm.TU.Sc2ySwM_368.556 Anthoceros agrestis HOM05D000001 ORTHO05D002182 2.0e-06 56.6 71 38.0
Carub.0007s2036 Capsella rubella HOM05D000001 ORTHO05D002182 2.0e-06 56.6 73 32.9
Glyma.03G165600 Glycine max HOM05D000001 ORTHO05D002182 2.0e-06 56.6 69 39.1
Mapoly0103s0079 Marchantia polymorpha HOM05D000001 ORTHO05D002182 2.0e-06 56.6 73 34.2
DCAR_027877 Daucus carota HOM05D000001 ORTHO05D002182 2.6e-06 56.2 75 32.0
MCO11G082 Micromonas commoda HOM05D000515 ORTHO05D005511 2.6e-06 56.2 89 36.0
Os05g0512000 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D002182 2.6e-06 56.2 73 32.9
arahy.Tifrunner.gnm1.ann1.0MSU5M Arachis hypogaea HOM05D000001 ORTHO05D002182 3.4e-06 55.8 115 30.4
arahy.Tifrunner.gnm1.ann1.GZCK2M Arachis hypogaea HOM05D000001 ORTHO05D002182 3.4e-06 55.8 75 36.0
Carub.0001s0318 Capsella rubella HOM05D000001 ORTHO05D002182 3.4e-06 55.8 71 33.8
Oeu041164.2 Olea europaea HOM05D000001 ORTHO05D002182 3.4e-06 55.8 73 32.9
Oeu058467.1 Olea europaea HOM05D000001 ORTHO05D002182 3.4e-06 55.8 73 31.5
CARHR227660 Cardamine hirsuta HOM05D000001 ORTHO05D002182 4.5e-06 55.5 73 31.5
Thhalv10024364m.g Eutrema salsugineum HOM05D000001 ORTHO05D002182 5.8e-06 55.1 73 31.5
Lj6g0021423 Lotus japonicus HOM05D000001 ORTHO05D002182 5.8e-06 55.1 73 30.1
Phvul.006G167200 Phaseolus vulgaris HOM05D000001 ORTHO05D002182 5.8e-06 55.1 73 32.9
Ah.14g086270 Amaranthus hybridus HOM05D000001 ORTHO05D002182 7.6e-06 54.7 73 30.1
AL7G33060 Arabidopsis lyrata HOM05D000001 ORTHO05D002182 7.6e-06 54.7 73 31.5
BcaNung05489 Brassica carinata HOM05D000001 ORTHO05D002182 7.6e-06 54.7 74 32.4
Ciclev10019112m.g Citrus clementina HOM05D000001 ORTHO05D002182 7.6e-06 54.7 67 34.3
Dinv16381 Davidia involucrata HOM05D000001 ORTHO05D002182 7.6e-06 54.7 69 34.8
Glyma.19G166900 Glycine max HOM05D000001 ORTHO05D002182 7.6e-06 54.7 69 39.1
Sp7g19160 Schrenkiella parvula HOM05D000001 ORTHO05D002182 7.6e-06 54.7 73 31.5
THA.LOC104801137 Tarenaya hassleriana HOM05D000001 ORTHO05D002182 7.6e-06 54.7 75 33.3
vmacro03421 Vaccinium macrocarpon HOM05D000001 ORTHO05D002182 7.6e-06 54.7 73 30.1
BcaNung03846 Brassica carinata HOM05D000001 ORTHO05D002182 9.9e-06 54.3 73 31.5
AUR62002658 Chenopodium quinoa HOM05D000001 ORTHO05D002182 9.9e-06 54.3 73 30.1
FvH4_3g09510 Fragaria vesca HOM05D000001 ORTHO05D002182 9.9e-06 54.3 79 30.4
FAN11G1988 Fragaria x ananassa HOM05D000001 ORTHO05D002182 9.9e-06 54.3 79 30.4
Gohir.A07G205000 Gossypium hirsutum HOM05D000001 ORTHO05D002182 9.9e-06 54.3 75 34.7
Gohir.D07G211100 Gossypium hirsutum HOM05D000001 ORTHO05D002182 9.9e-06 54.3 75 34.7
Gorai.001G238400 Gossypium raimondii HOM05D000001 ORTHO05D002182 9.9e-06 54.3 75 34.7
Gorai.001G238500 Gossypium raimondii HOM05D000001 ORTHO05D002182 9.9e-06 54.3 75 34.7
Medtr2g018880 Medicago truncatula HOM05D000001 ORTHO05D002182 9.9e-06 54.3 73 30.1
Oeu064635.2 Olea europaea HOM05D000001 ORTHO05D002182 9.9e-06 54.3 75 32.0


User provided reference genes

Program Settings