Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G336 Micromonas commoda HOM05D005230 ORTHO05D006506 4.1e-238 827.8 456 100.0
Mapoly0070s0045 Marchantia polymorpha HOM05D005230 ORTHO05D006506 3.9e-55 219.9 421 35.2
Dinv29329 Davidia involucrata HOM05D005230 ORTHO05D006506 2.6e-51 207.2 399 32.8
Pp3c16_600 Physcomitrium patens HOM05D005230 ORTHO05D006506 2.6e-51 207.2 394 34.5
CSS0035138 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 7.2e-49 199.1 399 32.6
CSS0009799 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 9.4e-49 198.7 399 32.3
Haze_23300 Corylus avellana HOM05D005230 ORTHO05D006506 9.4e-49 198.7 444 30.4
Aqoxy1G00076 Aquilegia oxysepala HOM05D005230 ORTHO05D006506 2.1e-48 197.6 403 32.0
arahy.Tifrunner.gnm1.ann1.554KFZ Arachis hypogaea HOM05D005230 ORTHO05D006506 4.6e-48 196.4 408 31.9
arahy.Tifrunner.gnm1.ann1.YWPQ0A Arachis hypogaea HOM05D005230 ORTHO05D006506 4.6e-48 196.4 408 31.9
Glyma.08G113500 Glycine max HOM05D005230 ORTHO05D006506 6.1e-48 196.1 401 33.2
Prupe.4G269500 Prunus persica HOM05D005230 ORTHO05D006506 6.1e-48 196.1 400 32.2
ECA238G4724 Erigeron canadensis HOM05D005230 ORTHO05D006506 7.9e-48 195.7 405 32.1
Hund07409 Selenicereus undatus HOM05D005230 ORTHO05D006506 7.9e-48 195.7 401 32.7
Os06g0338900 Oryza sativa ssp. japonica HOM05D005230 ORTHO05D006506 1.4e-47 194.9 404 33.2
Potri.009G066400 Populus trichocarpa HOM05D005230 ORTHO05D006506 1.4e-47 194.9 405 30.4
VMungo0251G0349 Vigna mungo HOM05D005230 ORTHO05D006506 1.8e-47 194.5 398 32.9
ATR0307G025 Amborella trichopoda HOM05D005230 ORTHO05D006506 2.3e-47 194.1 398 31.7
CANSAT54G1170 Cannabis sativa HOM05D005230 ORTHO05D006506 2.3e-47 194.1 399 31.8
Atru.chr3.2845 Acer truncatum HOM05D005230 ORTHO05D006506 3.0e-47 193.7 409 31.5
CDE08G0498 Ceratophyllum demersum HOM05D005230 ORTHO05D006506 3.0e-47 193.7 423 32.2
MD03G1163000 Malus domestica HOM05D005230 ORTHO05D006506 3.9e-47 193.4 399 31.8
Potri.001G271800 Populus trichocarpa HOM05D005230 ORTHO05D006506 5.1e-47 193.0 406 31.0
HanXRQChr13g0402151 Helianthus annuus HOM05D005230 ORTHO05D006506 6.7e-47 192.6 401 32.2
PSO339G0973 Papaver somniferum HOM05D005230 ORTHO05D006506 6.7e-47 192.6 392 32.7
GSVIVG01020254001 Vitis vinifera HOM05D005230 ORTHO05D006506 1.1e-46 191.8 398 31.7
Nn7g36961 Nelumbo nucifera HOM05D005230 ORTHO05D006506 2.0e-46 191.0 407 32.4
Glyma.05G155700 Glycine max HOM05D005230 ORTHO05D006506 2.5e-46 190.7 397 32.5
Lj4g0004497 Lotus japonicus HOM05D005230 ORTHO05D006506 2.5e-46 190.7 403 32.5
PSO384G0943 Papaver somniferum HOM05D005230 ORTHO05D006506 2.5e-46 190.7 391 31.7
Phvul.002G235800 Phaseolus vulgaris HOM05D005230 ORTHO05D006506 2.5e-46 190.7 398 32.7
FvH4_1g25390 Fragaria vesca HOM05D005230 ORTHO05D006506 3.3e-46 190.3 406 30.8
FAN23G0348 Fragaria x ananassa HOM05D005230 ORTHO05D006506 3.3e-46 190.3 406 30.3
Lalb_Chr07g0186541 Lupinus albus HOM05D005230 ORTHO05D006506 3.3e-46 190.3 400 33.0
RcHm_v2.0_Chr2g0123421 Rosa chinensis HOM05D005230 ORTHO05D006506 3.3e-46 190.3 405 31.1
DCAR_031608 Daucus carota HOM05D005230 ORTHO05D006506 4.3e-46 189.9 407 31.7
Lsat_1_v5_gn_2_32160 Lactuca sativa HOM05D005230 ORTHO05D006506 4.3e-46 189.9 399 30.6
Rhsim13G0231000 Rhododendron simsii HOM05D005230 ORTHO05D006506 7.4e-46 189.1 397 31.5
Cpa.g.sc34.203 Carica papaya HOM05D005230 ORTHO05D006506 9.7e-46 188.7 395 31.6
Eucgr.B03758 Eucalyptus grandis HOM05D005230 ORTHO05D006506 9.7e-46 188.7 397 31.7
Sabra16G0167000 Salix brachista HOM05D005230 ORTHO05D006506 1.3e-45 188.3 415 30.8
CiPaw.13G147000 Carya illinoinensis HOM05D005230 ORTHO05D006506 1.7e-45 188.0 396 31.1
CsaV3_1G041930 Cucumis sativus L. HOM05D005230 ORTHO05D006506 1.7e-45 188.0 397 32.5
Manes.01G177100 Manihot esculenta HOM05D005230 ORTHO05D006506 1.7e-45 188.0 400 30.5
Haze_23295 Corylus avellana HOM05D005230 ORTHO05D006506 2.8e-45 187.2 395 31.1
FAN28G1729 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.8e-45 187.2 405 30.6
TWI31G0483 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 3.7e-45 186.8 398 32.2
Manes.05G199900 Manihot esculenta HOM05D005230 ORTHO05D006506 6.3e-45 186.0 402 30.8
SGA_v2.0_scaffold29G12151 Striga asiatica HOM05D005230 ORTHO05D006506 6.3e-45 186.0 406 31.0
Cc01_g07300 Coffea canephora HOM05D005230 ORTHO05D006506 1.1e-44 185.3 397 31.2
Actinidia06848 Actinidia chinensis HOM05D005230 ORTHO05D006506 1.4e-44 184.9 396 32.3
Actinidia16258 Actinidia chinensis HOM05D005230 ORTHO05D006506 1.4e-44 184.9 404 31.9
MELO3C015608.2 Cucumis melo HOM05D005230 ORTHO05D006506 1.4e-44 184.9 400 31.5
Medtr8g085640 Medicago truncatula HOM05D005230 ORTHO05D006506 1.4e-44 184.9 400 31.2
Aa31LG1G8850 Aethionema arabicum HOM05D005230 ORTHO05D006506 2.4e-44 184.1 395 29.9
AUR62006575 Chenopodium quinoa HOM05D005230 ORTHO05D006506 3.1e-44 183.7 410 31.5
Ciclev10015197m.g Citrus clementina HOM05D005230 ORTHO05D006506 3.1e-44 183.7 395 30.4
Sed0024170 Sechium edule HOM05D005230 ORTHO05D006506 3.1e-44 183.7 396 32.3
AUR62000229 Chenopodium quinoa HOM05D005230 ORTHO05D006506 4.1e-44 183.3 410 31.5
Ca_17953_v3 Cicer arietinum L. HOM05D005230 ORTHO05D006506 5.3e-44 183.0 395 31.6
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 6.9e-44 182.6 398 30.2
QL01p016185 Quercus lobata HOM05D005230 ORTHO05D006506 6.9e-44 182.6 397 31.5
Sabra09G0049500 Salix brachista HOM05D005230 ORTHO05D006506 6.9e-44 182.6 401 29.4
SEGI_36393 Sequoiadendron giganteum HOM05D005230 ORTHO05D006506 9.1e-44 182.2 395 32.7
Oeu025950.1 Olea europaea HOM05D005230 ORTHO05D006506 1.2e-43 181.8 406 32.0
Psat7g073480 Pisum sativum HOM05D005230 ORTHO05D006506 1.5e-43 181.4 399 30.8
ClCG03G014290 Citrullus lanatus HOM05D005230 ORTHO05D006506 2.0e-43 181.0 401 31.2
MSTRG.21320 Avicennia marina HOM05D005230 ORTHO05D006506 3.4e-43 180.3 400 30.5
BraA02t05508Z Brassica rapa HOM05D005230 ORTHO05D006506 5.9e-43 179.5 386 30.6
Sopen11g029740 Solanum pennellii HOM05D005230 ORTHO05D006506 5.9e-43 179.5 397 30.5
BolC2t06957H Brassica oleracea HOM05D005230 ORTHO05D006506 7.7e-43 179.1 386 31.1
Solyc11g072090.2 Solanum lycopersicum HOM05D005230 ORTHO05D006506 7.7e-43 179.1 399 30.8
PGSC0003DMG400027416 Solanum tuberosum HOM05D005230 ORTHO05D006506 7.7e-43 179.1 397 30.5
THA.LOC104811208 Tarenaya hassleriana HOM05D005230 ORTHO05D006506 7.7e-43 179.1 395 30.1
TPR.G24369 Trifolium pratense HOM05D005230 ORTHO05D006506 7.7e-43 179.1 397 31.0
A02p05570 Brassica napus HOM05D005230 ORTHO05D006506 1.0e-42 178.7 386 30.8
BNapus_Darmor_BZH_scaffold_38p02380 Brassica napus HOM05D005230 ORTHO05D006506 1.0e-42 178.7 386 30.8
CAN.G280.6 Capsicum annuum HOM05D005230 ORTHO05D006506 1.0e-42 178.7 397 30.7
Thhalv10013503m.g Eutrema salsugineum HOM05D005230 ORTHO05D006506 1.0e-42 178.7 394 29.9
TWI75G0256 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 1.0e-42 178.7 404 30.4
Peaxi162Scf00978g00317 Petunia axillaris HOM05D005230 ORTHO05D006506 3.8e-42 176.8 396 30.8
Cfa009930 Carpinus fangiana HOM05D005230 ORTHO05D006506 6.5e-42 176.0 374 31.6
A10p20220 Brassica napus HOM05D005230 ORTHO05D006506 1.1e-41 175.3 398 29.9
SalBow6G0054 Salvia bowleyana HOM05D005230 ORTHO05D006506 1.1e-41 175.3 429 29.8
Sp6g24920 Schrenkiella parvula HOM05D005230 ORTHO05D006506 1.4e-41 174.9 393 30.3
BraA10t44093Z Brassica rapa HOM05D005230 ORTHO05D006506 2.5e-41 174.1 399 29.8
Ah.06g194900 Amaranthus hybridus HOM05D005230 ORTHO05D006506 3.2e-41 173.7 405 31.1
COL.COLO4_33253 Corchorus olitorius HOM05D005230 ORTHO05D006506 3.2e-41 173.7 400 29.2
Thecc.09G252100 Theobroma cacao HOM05D005230 ORTHO05D006506 3.2e-41 173.7 401 30.4
HPP92_016891 Vanilla planifolia HOM05D005230 ORTHO05D006506 3.2e-41 173.7 397 30.2
Duzib150G1312 Durio zibethinus HOM05D005230 ORTHO05D006506 9.4e-41 172.2 400 29.2
CARHR193430 Cardamine hirsuta HOM05D005230 ORTHO05D006506 1.2e-40 171.8 390 29.0
Duzib168G0825 Durio zibethinus HOM05D005230 ORTHO05D006506 4.7e-40 169.9 398 28.6
EL10Ac4g10073 Beta vulgaris HOM05D005230 ORTHO05D006506 7.9e-40 169.1 416 31.2
AL6G30990 Arabidopsis lyrata HOM05D005230 ORTHO05D006506 2.3e-39 167.5 392 29.3
Migut.D00707 Erythranthe guttata HOM05D005230 ORTHO05D006506 3.0e-39 167.2 413 29.5
MBI13_g00890_MAGBIO Magnolia biondii HOM05D005230 ORTHO05D006506 3.9e-39 166.8 414 31.4
Carub.0006s1783 Capsella rubella HOM05D005230 ORTHO05D006506 5.1e-39 166.4 392 29.6
SMO117G0151 Selaginella moellendorffii HOM05D005230 ORTHO05D006506 1.1e-38 165.2 389 29.8
Lj2C810G6 Lonicera japonica HOM05D005230 ORTHO05D006506 1.5e-38 164.9 375 31.2
AT5G19485 Arabidopsis thaliana HOM05D005230 ORTHO05D006506 2.0e-38 164.5 392 29.3
Nitab4.5_0002161g0080 Nicotiana tabacum HOM05D005230 ORTHO05D006506 4.8e-37 159.8 399 28.8
Oeu032061.2 Olea europaea HOM05D005230 ORTHO05D006506 8.2e-37 159.1 432 29.4
unitig_0.g309 Utricularia gibba HOM05D005230 ORTHO05D006506 2.0e-35 154.5 399 28.1
Zm00001eb051600 Zea mays HOM05D005230 ORTHO05D006506 5.9e-35 152.9 368 31.2
Cre03.g207825 Chlamydomonas reinhardtii HOM05D005230 ORTHO05D006506 1.3e-34 151.8 434 29.5
Gorai.004G013700 Gossypium raimondii HOM05D005230 ORTHO05D006506 2.2e-34 151.0 405 28.4
Gorai.006G123300 Gossypium raimondii HOM05D005230 ORTHO05D006506 2.9e-34 150.6 401 29.2
Gohir.D09G105900 Gossypium hirsutum HOM05D005230 ORTHO05D006506 5.0e-34 149.8 401 28.9
Gohir.D08G019200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 6.5e-34 149.4 405 28.6
FAN26G2809 Fragaria x ananassa HOM05D005230 ORTHO05D006506 9.4e-33 145.6 491 25.3
CBR_g54067 Chara braunii HOM05D005230 ORTHO05D006506 1.2e-32 145.2 389 30.3
Gohir.A08G009200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 2.1e-32 144.4 405 28.9
Gohir.A09G109300 Gossypium hirsutum HOM05D005230 ORTHO05D006506 2.7e-32 144.1 400 28.0
Nitab4.5_0002567g0160 Nicotiana tabacum HOM05D005230 ORTHO05D006506 4.7e-32 143.3 264 32.6
GSVIVG01002283001 Vitis vinifera HOM05D005230 ORTHO05D006506 8.0e-32 142.5 318 31.4
Mapoly0050s0011 Marchantia polymorpha HOM05D005230 ORTHO05D006506 2.3e-31 141.0 353 31.7
PGR102G1412 Punica granatum HOM05D005230 ORTHO05D006506 5.7e-30 136.3 391 27.9
Sc16g0010870 Simmondsia chinensis HOM05D005230 ORTHO05D006506 9.7e-30 135.6 329 33.7
vmacro04223 Vaccinium macrocarpon HOM05D005230 ORTHO05D006506 4.8e-29 133.3 353 30.0
Mapoly0050s0012 Marchantia polymorpha HOM05D005230 ORTHO05D006506 4.2e-25 120.2 242 33.5
TAR628G1140 Trochodendron aralioides HOM05D005230 ORTHO05D006506 8.3e-21 105.9 299 28.4
C09p56810 Brassica napus HOM05D005230 ORTHO05D006506 3.1e-20 104.0 232 28.9
Mapoly0070s0046 Marchantia polymorpha HOM05D005230 ORTHO05D006506 7.2e-17 92.8 111 41.4
Dinv24610 Davidia involucrata HOM05D005230 ORTHO05D006506 7.5e-14 82.8 335 27.5
PRCOL_00006600 Prasinoderma coloniale HOM05D005230 ORTHO05D006506 7.5e-14 82.8 429 25.9
Duzib150G0729 Durio zibethinus HOM05D005230 ORTHO05D006506 6.8e-07 59.7 119 30.3


User provided reference genes

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