Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G213 Micromonas commoda HOM05D003215 ORTHO05D003735 1.8e-229 798.9 393 100.0
Cre14.g632176 Chlamydomonas reinhardtii HOM05D003215 ORTHO05D003735 2.3e-35 154.1 364 29.1
QL05p019413 Quercus lobata HOM05D003215 ORTHO05D003735 6.9e-24 115.9 235 30.6
Mapoly0158s0003 Marchantia polymorpha HOM05D003215 ORTHO05D003735 9.0e-24 115.5 339 26.8
QL09p047318 Quercus lobata HOM05D003215 ORTHO05D003735 1.2e-23 115.2 235 30.6
Pp3c4_2120 Physcomitrium patens HOM05D003215 ORTHO05D003735 2.0e-23 114.4 265 27.9
Gorai.013G268300 Gossypium raimondii HOM05D003215 ORTHO05D003735 2.6e-23 114.0 234 29.5
Gohir.A13G231900 Gossypium hirsutum HOM05D003215 ORTHO05D003735 3.4e-23 113.6 234 29.5
Nitab4.5_0000185g0040 Nicotiana tabacum HOM05D003215 ORTHO05D003735 4.5e-23 113.2 331 28.4
Gohir.D13G237500 Gossypium hirsutum HOM05D003215 ORTHO05D003735 1.3e-22 111.7 234 29.5
Solyc08g007300.3 Solanum lycopersicum HOM05D003215 ORTHO05D003735 2.9e-22 110.5 235 29.8
Cc11_g08560 Coffea canephora HOM05D003215 ORTHO05D003735 3.8e-22 110.2 235 30.6
PRCOL_00005270 Prasinoderma coloniale HOM05D003215 ORTHO05D003735 3.8e-22 110.2 300 29.0
Sopen08g003240 Solanum pennellii HOM05D003215 ORTHO05D003735 3.8e-22 110.2 235 29.8
AagrBONN_evm.TU.Sc2ySwM_344.2899 Anthoceros agrestis HOM05D003215 ORTHO05D003735 4.9e-22 109.8 334 25.7
Manes.04G016500 Manihot esculenta HOM05D003215 ORTHO05D003735 4.9e-22 109.8 235 29.4
ECA233G3624 Erigeron canadensis HOM05D003215 ORTHO05D003735 8.4e-22 109.0 234 29.9
Nitab4.5_0004170g0030 Nicotiana tabacum HOM05D003215 ORTHO05D003735 8.4e-22 109.0 230 30.4
Nitab4.5_0000712g0040 Nicotiana tabacum HOM05D003215 ORTHO05D003735 1.1e-21 108.6 293 27.6
Peaxi162Scf00102g00926 Petunia axillaris HOM05D003215 ORTHO05D003735 1.4e-21 108.2 200 31.5
Hund25131 Selenicereus undatus HOM05D003215 ORTHO05D003735 1.9e-21 107.8 235 28.1
AUR62027593 Chenopodium quinoa HOM05D003215 ORTHO05D003735 2.4e-21 107.5 379 26.1
ECA236G3716 Erigeron canadensis HOM05D003215 ORTHO05D003735 2.4e-21 107.5 234 30.3
Nitab4.5_0000185g0060 Nicotiana tabacum HOM05D003215 ORTHO05D003735 5.4e-21 106.3 290 25.2
Sabra03G0123800 Salix brachista HOM05D003215 ORTHO05D003735 7.1e-21 105.9 230 29.6
PSO210G0114 Papaver somniferum HOM05D003215 ORTHO05D003735 9.3e-21 105.5 232 28.4
EL10As2g23156 Beta vulgaris HOM05D003215 ORTHO05D003735 1.6e-20 104.8 301 26.6
Peaxi162Scf01390g00030 Petunia axillaris HOM05D003215 ORTHO05D003735 1.6e-20 104.8 227 29.5
SGA_v2.0_scaffold114G31828 Striga asiatica HOM05D003215 ORTHO05D003735 1.6e-20 104.8 295 25.1
Aa31LG9G1040 Aethionema arabicum HOM05D003215 ORTHO05D003735 2.1e-20 104.4 300 27.3
HanXRQChr11g0328481 Helianthus annuus HOM05D003215 ORTHO05D003735 2.1e-20 104.4 198 29.8
MD04G1037700 Malus domestica HOM05D003215 ORTHO05D003735 2.1e-20 104.4 241 30.3
Peaxi162Scf01390g00031 Petunia axillaris HOM05D001168 ORTHO05D003735 2.1e-20 104.4 227 29.5
Psat1g024480 Pisum sativum HOM05D003215 ORTHO05D003735 2.1e-20 104.4 372 23.7
HPP92_007494 Vanilla planifolia HOM05D003215 ORTHO05D003735 2.1e-20 104.4 227 32.6
CiPaw.11G100100 Carya illinoinensis HOM05D003215 ORTHO05D003735 2.7e-20 104.0 295 26.4
HanXRQChr10g0309901 Helianthus annuus HOM05D003215 ORTHO05D003735 2.7e-20 104.0 233 28.3
Thecc.09G346500 Theobroma cacao HOM05D003215 ORTHO05D003735 2.7e-20 104.0 389 26.2
Aa31LG9G750 Aethionema arabicum HOM05D003215 ORTHO05D003735 4.6e-20 103.2 227 28.2
THA.LOC104816721 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 6.0e-20 102.8 333 25.5
TWI31G0413 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 6.0e-20 102.8 232 27.6
arahy.Tifrunner.gnm1.ann1.7W7N8S Arachis hypogaea HOM05D003215 ORTHO05D003735 7.9e-20 102.4 234 27.4
MELO3C006154.2 Cucumis melo HOM05D003215 ORTHO05D003735 7.9e-20 102.4 235 28.9
DCAR_004337 Daucus carota HOM05D003215 ORTHO05D003735 1.0e-19 102.1 297 26.3
DCAR_024215 Daucus carota HOM05D003215 ORTHO05D003735 1.0e-19 102.1 297 26.3
DCAR_024216 Daucus carota HOM05D003215 ORTHO05D003735 1.3e-19 101.7 297 26.3
Oeu050248.1 Olea europaea HOM05D003215 ORTHO05D003735 1.3e-19 101.7 373 24.7
Sc24g0002070 Simmondsia chinensis HOM05D003215 ORTHO05D003735 1.3e-19 101.7 360 25.8
TWI18G1003 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 1.3e-19 101.7 322 26.4
Atru.chr3.3572 Acer truncatum HOM05D003215 ORTHO05D003735 1.8e-19 101.3 235 27.7
MSTRG.4371 Avicennia marina HOM05D003215 ORTHO05D003735 1.8e-19 101.3 295 25.4
Lj4C665T1 Lonicera japonica HOM05D003215 ORTHO05D003735 1.8e-19 101.3 366 25.7
PSO675G7906 Papaver somniferum HOM05D003215 ORTHO05D003735 1.8e-19 101.3 200 29.5
THA.LOC104815051 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 1.8e-19 101.3 312 25.3
Aqoxy4G00232 Aquilegia oxysepala HOM05D003215 ORTHO05D003735 2.3e-19 100.9 235 28.5
Glyma.13G128500 Glycine max HOM05D003215 ORTHO05D003735 2.3e-19 100.9 292 25.3
Psat4g091440 Pisum sativum HOM05D003215 ORTHO05D003735 2.3e-19 100.9 206 28.2
Aqoxy6G03074 Aquilegia oxysepala HOM05D003215 ORTHO05D003735 3.0e-19 100.5 235 28.5
CsaV3_3G009340 Cucumis sativus L. HOM05D003215 ORTHO05D003735 3.0e-19 100.5 303 27.1
PSO210G2437 Papaver somniferum HOM05D003215 ORTHO05D003735 3.0e-19 100.5 295 25.4
CiPaw.15G124500 Carya illinoinensis HOM05D003215 ORTHO05D003735 3.9e-19 100.1 230 28.7
Lsat_1_v5_gn_7_104201 Lactuca sativa HOM05D003215 ORTHO05D003735 3.9e-19 100.1 234 27.4
Cpa.g.sc65.22 Carica papaya HOM05D003215 ORTHO05D003735 5.1e-19 99.8 380 25.5
CDE11G0705 Ceratophyllum demersum HOM05D003215 ORTHO05D003735 5.1e-19 99.8 200 30.5
Duzib168G1098 Durio zibethinus HOM05D003215 ORTHO05D003735 5.1e-19 99.8 390 26.4
Nitab4.5_0000712g0020 Nicotiana tabacum HOM05D003215 ORTHO05D003735 5.1e-19 99.8 235 27.7
Peaxi162Scf00029g00131 Petunia axillaris HOM05D003215 ORTHO05D003735 5.1e-19 99.8 199 29.6
PGSC0003DMG400011852 Solanum tuberosum HOM05D003215 ORTHO05D003735 5.1e-19 99.8 197 29.4
Aqoxy2G04188 Aquilegia oxysepala HOM05D003215 ORTHO05D003735 6.7e-19 99.4 235 28.5
DCAR_008318 Daucus carota HOM05D003215 ORTHO05D003735 6.7e-19 99.4 294 25.5
LjContig00081g0004985 Lotus japonicus HOM05D003215 ORTHO05D003735 6.7e-19 99.4 406 23.6
COL.COLO4_18286 Corchorus olitorius HOM05D003215 ORTHO05D003735 8.7e-19 99.0 382 26.4
Lalb_Chr01g0022221 Lupinus albus HOM05D003215 ORTHO05D003735 8.7e-19 99.0 337 23.7
PSO210G4537 Papaver somniferum HOM05D003215 ORTHO05D003735 8.7e-19 99.0 232 27.2
A04p14060 Brassica napus HOM05D003215 ORTHO05D003735 1.1e-18 98.6 238 28.6
BraA04t17067Z Brassica rapa HOM05D003215 ORTHO05D003735 1.1e-18 98.6 238 28.6
CAN.G3121.3 Capsicum annuum HOM05D003215 ORTHO05D003735 1.1e-18 98.6 228 28.9
MBI05_g27786_MAGBIO Magnolia biondii HOM05D003215 ORTHO05D003735 1.1e-18 98.6 316 25.0
AL7G48530 Arabidopsis lyrata HOM05D003215 ORTHO05D003735 1.5e-18 98.2 228 28.5
CARHR213350 Cardamine hirsuta HOM05D003215 ORTHO05D003735 1.5e-18 98.2 228 28.1
BolC5t32818H Brassica oleracea HOM05D003215 ORTHO05D003735 1.9e-18 97.8 219 29.2
Carub.0007s3447 Capsella rubella HOM05D003215 ORTHO05D003735 1.9e-18 97.8 324 25.6
AUR62030249 Chenopodium quinoa HOM05D003215 ORTHO05D003735 1.9e-18 97.8 387 26.9
Haze_21721 Corylus avellana HOM05D003215 ORTHO05D003735 1.9e-18 97.8 412 24.8
Oeu046322.1 Olea europaea HOM05D003215 ORTHO05D003735 1.9e-18 97.8 399 26.8
Atru.chr3.3575 Acer truncatum HOM05D003215 ORTHO05D003735 2.5e-18 97.4 253 28.5
EL10Ac1g02277 Beta vulgaris HOM05D003215 ORTHO05D003735 2.5e-18 97.4 404 25.5
C05p40730 Brassica napus HOM05D003215 ORTHO05D003735 2.5e-18 97.4 219 29.2
Ca_14134_v3 Cicer arietinum L. HOM05D003215 ORTHO05D003735 5.6e-18 96.3 356 22.8
PSO210G4587 Papaver somniferum HOM05D003215 ORTHO05D003735 5.6e-18 96.3 390 25.6
vmacro10400 Vaccinium macrocarpon HOM05D003215 ORTHO05D003735 5.6e-18 96.3 392 26.5
BcaB06g27584 Brassica carinata HOM05D003215 ORTHO05D003735 7.4e-18 95.9 293 25.9
BcaC02g08984 Brassica carinata HOM05D003215 ORTHO05D003735 7.4e-18 95.9 238 27.7
BolC4t26400H Brassica oleracea HOM05D003215 ORTHO05D003735 7.4e-18 95.9 238 27.7
CAN.G861.12 Capsicum annuum HOM05D003215 ORTHO05D003735 9.6e-18 95.5 311 25.7
Phvul.007G154900 Phaseolus vulgaris HOM05D003215 ORTHO05D003735 9.6e-18 95.5 232 26.7
Ciclev10014556m.g Citrus clementina HOM05D003215 ORTHO05D003735 1.3e-17 95.1 386 25.9
Ciclev10030284m.g Citrus clementina HOM05D003215 ORTHO05D003735 1.3e-17 95.1 397 25.7
ClCG05G001940 Citrullus lanatus HOM05D003215 ORTHO05D003735 1.6e-17 94.7 372 25.0
PSO210G2801 Papaver somniferum HOM05D003215 ORTHO05D003735 1.6e-17 94.7 295 24.7
PGR083G2356 Punica granatum HOM05D003215 ORTHO05D003735 2.1e-17 94.4 235 26.8
Zm00001eb172100 Zea mays HOM05D003215 ORTHO05D003735 2.1e-17 94.4 397 25.9
BcaNung03841 Brassica carinata HOM05D003215 ORTHO05D003735 2.8e-17 94.0 325 24.3
FAN21G3495 Fragaria x ananassa HOM05D003215 ORTHO05D003735 2.8e-17 94.0 386 25.6
Actinidia34779 Actinidia chinensis HOM05D003215 ORTHO05D003735 3.7e-17 93.6 389 25.7
FAN11G0613 Fragaria x ananassa HOM05D003215 ORTHO05D003735 3.7e-17 93.6 386 25.4
unitig_52.g17692 Utricularia gibba HOM05D003215 ORTHO05D003735 4.8e-17 93.2 375 25.1
AT5G41020 Arabidopsis thaliana HOM05D003215 ORTHO05D003735 8.1e-17 92.4 228 27.6
BcaC05g28060 Brassica carinata HOM05D003215 ORTHO05D003735 8.1e-17 92.4 200 29.0
FvH4_3g31460 Fragaria vesca HOM05D003215 ORTHO05D003735 8.1e-17 92.4 386 25.4
CANSAT54G0322 Cannabis sativa HOM05D003215 ORTHO05D003735 1.4e-16 91.7 229 27.9
Manes.11G149200 Manihot esculenta HOM05D003215 ORTHO05D003735 1.4e-16 91.7 394 24.1
BcaB06g26361 Brassica carinata HOM05D003215 ORTHO05D003735 2.4e-16 90.9 201 28.4
CAN.G861.14 Capsicum annuum HOM05D003215 ORTHO05D003735 2.4e-16 90.9 188 31.4
Potri.003G168900 Populus trichocarpa HOM05D003215 ORTHO05D003735 2.4e-16 90.9 397 25.7
RcHm_v2.0_Chr5g0058161 Rosa chinensis HOM05D003215 ORTHO05D003735 3.1e-16 90.5 230 28.3
Potri.015G095000 Populus trichocarpa HOM05D003215 ORTHO05D003735 4.0e-16 90.1 394 24.9
Cfa013261 Carpinus fangiana HOM05D003215 ORTHO05D003735 5.3e-16 89.7 387 23.3
Prupe.6G106700 Prunus persica HOM05D003215 ORTHO05D003735 5.3e-16 89.7 392 25.0
Lj4C675G2 Lonicera japonica HOM05D003215 ORTHO05D003735 6.9e-16 89.4 383 24.3
TPR.G16275 Trifolium pratense HOM05D003215 ORTHO05D003735 6.9e-16 89.4 295 23.7
Aa31LG9G1030 Aethionema arabicum HOM05D003215 ORTHO05D003735 9.0e-16 89.0 186 32.8
Dinv29349 Davidia involucrata HOM05D003215 ORTHO05D003735 9.0e-16 89.0 395 25.1
FAN16G3289 Fragaria x ananassa HOM05D003215 ORTHO05D003735 9.0e-16 89.0 386 25.1
PSO170G2126 Papaver somniferum HOM05D003215 ORTHO05D003735 9.0e-16 89.0 361 23.8
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 9.0e-16 89.0 410 25.9
THA.LOC104815151 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 9.0e-16 89.0 273 26.0
Medtr8g077990 Medicago truncatula HOM05D003215 ORTHO05D003735 1.2e-15 88.6 198 27.3
Nn7g37196 Nelumbo nucifera HOM05D003215 ORTHO05D003735 1.2e-15 88.6 415 26.5
CSS0012061 Camellia sinensis var. sinensis HOM05D003215 ORTHO05D003735 2.0e-15 87.8 397 24.9
PGSC0003DMG400015274 Solanum tuberosum HOM05D003215 ORTHO05D003735 2.0e-15 87.8 389 24.2
Hma1.2p1_0892F.1_g233410 Hydrangea macrophylla HOM05D003215 ORTHO05D003735 3.4e-15 87.0 386 24.6
Sed0005911 Sechium edule HOM05D003215 ORTHO05D003735 5.8e-15 86.3 414 24.6
Solyc03g019800.4 Solanum lycopersicum HOM05D003215 ORTHO05D003735 5.8e-15 86.3 395 24.1
SHI08388 Sapria himalayana HOM05D003215 ORTHO05D003735 9.9e-15 85.5 298 24.8
Eucgr.H02514 Eucalyptus grandis HOM05D003215 ORTHO05D003735 2.2e-14 84.3 366 25.4
TAR626G0419 Trochodendron aralioides HOM05D003215 ORTHO05D003735 2.2e-14 84.3 392 24.2
Lj3g0014709 Lotus japonicus HOM05D003215 ORTHO05D003735 2.9e-14 84.0 391 23.0
TWI31G0331 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 2.9e-14 84.0 378 24.1
Sopen03g029820 Solanum pennellii HOM05D003215 ORTHO05D003735 3.8e-14 83.6 389 24.2
Prupe.6G210800 Prunus persica HOM05D003215 ORTHO05D003735 6.4e-14 82.8 386 26.2
Oeu020912.1 Olea europaea HOM05D003215 ORTHO05D003735 8.4e-14 82.4 160 32.5
Haze_25499 Corylus avellana HOM05D003215 ORTHO05D003735 9.3e-13 79.0 304 23.4
RcHm_v2.0_Chr7g0227601 Rosa chinensis HOM05D003215 ORTHO05D003735 3.5e-12 77.0 147 34.0
Peaxi162Scf25743g00024 Petunia axillaris HOM05D003215 ORTHO05D003735 3.0e-11 73.9 160 30.0
Sed0019703 Sechium edule HOM05D003215 ORTHO05D003735 1.5e-10 71.6 119 32.8
Peaxi162Scf00102g01055 Petunia axillaris HOM05D003215 ORTHO05D003735 5.6e-10 69.7 140 32.1
C01p15060 Brassica napus HOM05D003215 ORTHO05D003735 9.6e-10 68.9 117 30.8
C04p48090 Brassica napus HOM05D003215 ORTHO05D003735 8.2e-09 65.9 151 29.8
RcHm_v2.0_Chr7g0222761 Rosa chinensis HOM05D003215 ORTHO05D003735 1.8e-08 64.7 114 32.5
PGSC0003DMG400015272 Solanum tuberosum HOM05D003215 ORTHO05D003735 3.1e-08 63.9 115 29.6
Dinv24641 Davidia involucrata HOM05D005181 ORTHO05D006086 1.5e-07 61.6 206 23.8
AL3G31260 Arabidopsis lyrata HOM05D005181 ORTHO05D006086 2.6e-07 60.8 184 23.9
DCAR_005622 Daucus carota HOM05D005181 ORTHO05D006086 2.2e-06 57.8 172 27.3
Sc12g0000930 Simmondsia chinensis HOM05D000119 ORTHO05D000054 2.2e-06 57.8 117 33.3
PSO339G6026 Papaver somniferum HOM05D000119 ORTHO05D000054 2.9e-06 57.4 115 33.0
Aqoxy2G02129 Aquilegia oxysepala HOM05D000119 ORTHO05D000054 3.8e-06 57.0 209 27.3
BcaC05g29518 Brassica carinata HOM05D000119 ORTHO05D000054 3.8e-06 57.0 91 37.4
DCAR_028712 Daucus carota HOM05D005181 ORTHO05D006086 3.8e-06 57.0 167 26.3
EL10Ac6g13885 Beta vulgaris HOM05D003215 ORTHO05D003735 4.9e-06 56.6 133 27.8
EL10As1g23101 Beta vulgaris HOM05D000119 ORTHO05D000054 4.9e-06 56.6 173 27.7
CiPaw.13G080000 Carya illinoinensis HOM05D000119 ORTHO05D000054 4.9e-06 56.6 149 29.5
Actinidia23894 Actinidia chinensis HOM05D000119 ORTHO05D000054 6.5e-06 56.2 160 28.8
Lj4g0013497 Lotus japonicus HOM05D000119 ORTHO05D000054 6.5e-06 56.2 115 33.9
Psat5g160760 Pisum sativum HOM05D000119 ORTHO05D000054 6.5e-06 56.2 117 32.5
PGR042G3627 Punica granatum HOM05D000119 ORTHO05D000054 6.5e-06 56.2 115 33.0


User provided reference genes

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