Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 8.0e-233 810.1 410 100.0
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 1.5e-26 124.8 287 29.6
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 3.4e-26 123.6 285 29.5
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 2.2e-25 120.9 285 30.9
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 8.5e-25 119.0 284 29.6
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 8.5e-25 119.0 352 28.1
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 1.1e-24 118.6 280 29.6
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 1.4e-24 118.2 285 29.1
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 7.2e-24 115.9 279 29.0
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 9.4e-24 115.5 284 28.2
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 9.4e-24 115.5 280 29.6
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 3.6e-23 113.6 287 30.3
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 1.4e-22 111.7 284 28.5
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 1.4e-22 111.7 287 30.3
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 1.8e-22 111.3 288 28.1
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 1.8e-22 111.3 281 27.4
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 2.3e-22 110.9 283 28.3
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 3.0e-22 110.5 287 30.7
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 3.0e-22 110.5 278 27.0
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 3.0e-22 110.5 280 30.4
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 3.9e-22 110.2 287 29.6
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 5.1e-22 109.8 285 29.1
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 5.1e-22 109.8 286 27.3
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 6.7e-22 109.4 286 27.6
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 6.7e-22 109.4 270 28.9
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 1.1e-21 108.6 295 27.8
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.1e-21 108.6 283 28.6
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 2.0e-21 107.8 268 29.5
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 2.0e-21 107.8 285 28.4
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 3.3e-21 107.1 264 27.7
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 3.3e-21 107.1 293 28.3
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 3.3e-21 107.1 284 28.2
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 4.3e-21 106.7 284 27.5
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 5.7e-21 106.3 283 27.9
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 5.7e-21 106.3 286 26.6
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 7.4e-21 105.9 293 28.3
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 7.4e-21 105.9 284 28.5
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 9.7e-21 105.5 285 27.7
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 1.7e-20 104.8 269 26.4
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 1.7e-20 104.8 270 27.8
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 2.2e-20 104.4 282 28.4
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 2.2e-20 104.4 287 27.5
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 2.8e-20 104.0 284 25.4
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 3.7e-20 103.6 269 26.4
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 6.3e-20 102.8 289 28.4
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 8.2e-20 102.4 279 26.5
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 8.2e-20 102.4 271 28.8
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 1.4e-19 101.7 284 29.2
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 1.4e-19 101.7 283 27.2
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 1.4e-19 101.7 289 28.7
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 1.8e-19 101.3 284 25.7
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 1.8e-19 101.3 284 29.2
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 2.4e-19 100.9 285 27.7
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 3.1e-19 100.5 250 27.6
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 3.1e-19 100.5 255 26.3
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 3.1e-19 100.5 286 28.7
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 4.1e-19 100.1 250 27.6
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 4.1e-19 100.1 285 27.4
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 5.3e-19 99.8 283 29.0
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 6.9e-19 99.4 272 28.3
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 6.9e-19 99.4 284 28.5
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 1.2e-18 98.6 284 26.1
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 2.0e-18 97.8 289 27.7
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 2.0e-18 97.8 285 29.1
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 5.9e-18 96.3 285 25.6
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 7.7e-18 95.9 286 27.3
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 7.7e-18 95.9 284 28.2
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 3.8e-17 93.6 285 26.3
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.4e-16 91.7 302 26.5
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 3.2e-16 90.5 309 25.2
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 1.2e-15 88.6 295 27.8
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 3.9e-14 83.6 192 29.7
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 8.8e-14 82.4 239 28.0
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.1e-13 82.0 228 25.9
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 1.1e-13 82.0 290 25.5
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 1.4e-11 75.1 279 23.3
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.4e-11 75.1 323 23.8
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.8e-11 74.7 221 25.8
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 9.1e-11 72.4 221 27.6
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 3.5e-10 70.5 285 24.6
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 7.7e-10 69.3 216 25.9
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 1.7e-09 68.2 228 27.2
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 2.2e-09 67.8 221 25.3
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.9e-09 67.4 162 28.4
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.7e-07 60.8 129 28.7
MCO15G573 Micromonas commoda HOM05D006784 ORTHO05D008508 3.6e-07 60.5 342 25.4
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 4.7e-07 60.1 233 25.3
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 6.1e-07 59.7 163 29.4
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 2.3e-06 57.8 163 25.8
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 6.7e-06 56.2 125 29.6


User provided reference genes

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