Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 0.0e+00 1124.4 553 100.0
Cre07.g323950 Chlamydomonas reinhardtii HOM05D037152 ORTHO05D034124 2.5e-27 127.9 239 36.0
Cfa022648 Carpinus fangiana HOM05D037152 ORTHO05D034124 2.1e-18 98.2 201 31.8
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.0e-13 81.6 265 28.7
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 7.2e-11 73.2 251 29.9
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 7.9e-10 69.7 251 27.9
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 2.6e-08 64.7 211 28.9
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 3.3e-08 64.3 265 25.3
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 5.7e-08 63.5 222 30.6
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 9.7e-08 62.8 252 28.6
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.3e-07 62.4 156 34.0
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.3e-07 62.4 177 32.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.7e-07 62.0 251 26.3
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.7e-07 62.0 222 30.6
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.7e-07 62.0 219 29.2
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 2.2e-07 61.6 222 27.5
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.2e-07 61.6 251 26.3
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.2e-07 61.6 222 30.2
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 2.2e-07 61.6 222 27.9
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 2.8e-07 61.2 207 28.0
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.7e-07 60.8 252 27.4
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 4.8e-07 60.5 171 31.6
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 4.8e-07 60.5 157 31.2
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 6.3e-07 60.1 251 27.9
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 6.3e-07 60.1 265 24.9
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.3e-07 60.1 252 27.4
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 8.2e-07 59.7 154 32.5
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 8.2e-07 59.7 157 30.6
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.1e-06 59.3 168 29.8
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.1e-06 59.3 163 31.3
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 1.8e-06 58.5 156 31.4
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.8e-06 58.5 156 32.1
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 1.8e-06 58.5 216 27.3
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 1.8e-06 58.5 168 31.5
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.8e-06 58.5 222 27.5
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 1.8e-06 58.5 157 31.8
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 2.4e-06 58.2 170 31.8
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 2.4e-06 58.2 168 31.0
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 3.1e-06 57.8 137 35.8
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 3.1e-06 57.8 167 31.1
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 4.1e-06 57.4 172 31.4
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 4.1e-06 57.4 172 31.4
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 4.1e-06 57.4 172 31.4
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 4.1e-06 57.4 157 31.2
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 4.1e-06 57.4 153 31.4
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 5.3e-06 57.0 174 31.0
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 5.3e-06 57.0 174 31.0
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 5.3e-06 57.0 171 31.6
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 7.0e-06 56.6 167 30.5
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.0e-06 56.6 159 32.7
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 7.0e-06 56.6 171 30.4
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 7.0e-06 56.6 171 30.4
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 7.0e-06 56.6 167 31.1
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 7.0e-06 56.6 170 31.8


User provided reference genes

Program Settings