Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 5.7e-229 797.3 401 100.0
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 7.2e-30 136.0 368 28.3
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 6.1e-29 132.9 368 28.0
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 3.0e-28 130.6 393 27.5
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 8.8e-28 129.0 373 29.2
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 8.8e-28 129.0 374 29.7
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 2.0e-27 127.9 407 27.3
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 2.5e-27 127.5 372 28.5
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 3.3e-27 127.1 393 28.0
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 3.3e-27 127.1 390 26.9
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 4.3e-27 126.7 371 27.0
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 5.7e-27 126.3 368 26.9
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 1.3e-26 125.2 387 27.1
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 1.3e-26 125.2 389 27.0
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 2.8e-26 124.0 381 27.3
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 2.8e-26 124.0 364 27.5
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 3.7e-26 123.6 381 27.3
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 6.3e-26 122.9 386 26.9
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 6.3e-26 122.9 393 28.0
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 1.1e-25 122.1 371 25.6
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 1.1e-25 122.1 394 27.4
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 1.4e-25 121.7 363 28.1
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 1.8e-25 121.3 372 27.2
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 1.8e-25 121.3 393 27.7
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 3.1e-25 120.6 371 26.7
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 5.3e-25 119.8 205 34.6
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 9.1e-25 119.0 383 27.9
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 9.1e-25 119.0 377 29.4
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 1.5e-24 118.2 368 26.4
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 1.5e-24 118.2 391 26.3
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 2.0e-24 117.9 368 26.4
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 2.0e-24 117.9 191 34.6
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 2.0e-24 117.9 263 30.0
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 2.6e-24 117.5 369 25.2
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 2.6e-24 117.5 420 26.2
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 2.6e-24 117.5 371 27.0
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 2.6e-24 117.5 380 27.4
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 5.9e-24 116.3 245 30.2
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 5.9e-24 116.3 388 24.7
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 5.9e-24 116.3 371 27.0
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 5.9e-24 116.3 366 27.3
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 5.9e-24 116.3 191 34.6
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 5.9e-24 116.3 207 33.8
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 5.9e-24 116.3 207 33.8
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 7.7e-24 115.9 191 34.6
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 7.7e-24 115.9 191 34.0
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 7.7e-24 115.9 377 26.5
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 7.7e-24 115.9 372 27.7
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 7.7e-24 115.9 375 26.9
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 1.0e-23 115.5 394 28.4
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.0e-23 115.5 371 26.1
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 1.0e-23 115.5 386 28.5
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 1.0e-23 115.5 386 28.8
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.3e-23 115.2 245 31.0
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 1.3e-23 115.2 372 28.0
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 1.3e-23 115.2 192 34.4
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 1.3e-23 115.2 371 28.0
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 1.3e-23 115.2 388 27.3
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.7e-23 114.8 386 28.5
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.7e-23 114.8 192 32.8
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.7e-23 114.8 192 32.8
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.7e-23 114.8 379 28.0
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 2.2e-23 114.4 372 26.6
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 2.9e-23 114.0 245 30.6
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 2.9e-23 114.0 372 26.1
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 2.9e-23 114.0 372 26.6
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 3.8e-23 113.6 370 25.9
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 3.8e-23 113.6 372 26.6
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 5.0e-23 113.2 373 27.6
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 6.5e-23 112.8 369 26.3
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 6.5e-23 112.8 386 28.0
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 6.5e-23 112.8 381 26.0
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 8.5e-23 112.5 372 26.6
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 8.5e-23 112.5 192 32.3
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 1.4e-22 111.7 387 27.1
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 1.4e-22 111.7 387 25.3
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 1.4e-22 111.7 371 26.7
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 1.9e-22 111.3 371 27.5
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 1.9e-22 111.3 192 33.9
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 2.5e-22 110.9 191 35.1
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 2.5e-22 110.9 384 30.2
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 3.2e-22 110.5 369 27.1
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 3.2e-22 110.5 307 28.3
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 3.2e-22 110.5 390 27.4
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 5.5e-22 109.8 369 26.3
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 5.5e-22 109.8 371 25.9
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 5.5e-22 109.8 375 26.9
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 5.5e-22 109.8 371 26.4
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 7.2e-22 109.4 371 27.8
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 7.2e-22 109.4 371 27.8
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 9.4e-22 109.0 192 30.7
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 9.4e-22 109.0 390 26.9
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 9.4e-22 109.0 371 27.8
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 9.4e-22 109.0 371 24.8
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 1.2e-21 108.6 371 27.2
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 1.2e-21 108.6 371 25.6
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 1.6e-21 108.2 250 28.4
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 1.6e-21 108.2 185 33.5
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 1.6e-21 108.2 400 28.0
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 3.6e-21 107.1 192 32.8
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 3.6e-21 107.1 307 28.0
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 6.1e-21 106.3 385 26.8
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 6.1e-21 106.3 179 34.1
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 7.9e-21 105.9 193 31.6
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 7.9e-21 105.9 397 27.2
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 1.4e-20 105.1 373 24.9
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 1.8e-20 104.8 371 26.4
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 1.8e-20 104.8 371 27.0
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 3.0e-20 104.0 179 34.1
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 3.0e-20 104.0 223 30.5
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 5.1e-20 103.2 192 31.2
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 5.1e-20 103.2 223 30.9
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 1.5e-19 101.7 259 30.9
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 1.5e-19 101.7 192 29.7
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 2.6e-19 100.9 193 29.0
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 5.7e-19 99.8 375 24.8
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 5.7e-19 99.8 355 26.5
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 2.8e-18 97.4 192 29.2
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.8e-18 97.4 184 30.4
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.0e-16 91.3 378 26.2
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 2.6e-16 90.9 172 30.2
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 3.2e-14 84.0 129 33.3
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.2e-13 82.0 360 24.2
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.2e-13 82.0 369 23.0
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 1.2e-13 82.0 373 26.8
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 1.5e-11 75.1 318 26.1
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 9.7e-11 72.4 114 32.5
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.1e-09 68.9 229 26.6
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.1e-09 68.9 195 26.7
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 1.8e-09 68.2 151 28.5
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 4.1e-09 67.0 114 31.6
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 2.2e-07 61.2 161 25.5
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 3.2e-06 57.4 325 24.0
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 3.2e-06 57.4 325 24.0


User provided reference genes

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