Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 2.1e-146 522.3 255 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 9.6e-35 151.4 238 38.2
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.6e-34 150.6 238 37.0
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 2.1e-34 150.2 235 39.1
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 2.8e-34 149.8 239 37.7
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 2.8e-34 149.8 240 37.1
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 4.8e-34 149.1 239 37.2
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 4.8e-34 149.1 238 38.2
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 6.2e-34 148.7 238 37.0
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 8.1e-34 148.3 236 37.7
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 8.1e-34 148.3 250 36.4
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 8.1e-34 148.3 238 35.7
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.4e-33 147.5 241 36.9
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.4e-33 147.5 240 37.1
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 1.8e-33 147.1 245 38.0
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.4e-33 146.7 238 36.1
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 3.1e-33 146.4 238 37.0
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 3.1e-33 146.4 238 37.4
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 5.3e-33 145.6 238 36.6
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 5.3e-33 145.6 235 36.6
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 6.9e-33 145.2 235 36.2
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 6.9e-33 145.2 239 36.8
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.9e-33 145.2 250 36.0
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 6.9e-33 145.2 253 35.6
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 6.9e-33 145.2 236 37.3
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 6.9e-33 145.2 238 35.7
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 9.0e-33 144.8 238 36.1
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 9.0e-33 144.8 235 37.0
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 9.0e-33 144.8 238 35.7
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 9.0e-33 144.8 238 37.0
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.2e-32 144.4 238 35.7
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.2e-32 144.4 238 36.1
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.2e-32 144.4 238 36.1
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.2e-32 144.4 235 37.0
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 1.5e-32 144.1 238 36.1
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 1.5e-32 144.1 238 35.7
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 1.5e-32 144.1 238 34.9
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 2.0e-32 143.7 247 34.8
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 2.0e-32 143.7 238 35.7
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 2.6e-32 143.3 238 35.7
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 2.6e-32 143.3 235 36.6
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 3.4e-32 142.9 238 35.7
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 3.4e-32 142.9 235 35.3
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 3.4e-32 142.9 235 38.7
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 3.4e-32 142.9 238 36.1
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 4.4e-32 142.5 235 36.2
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 4.4e-32 142.5 238 35.7
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 4.4e-32 142.5 235 36.6
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 4.4e-32 142.5 238 35.3
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 4.4e-32 142.5 236 36.9
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 5.8e-32 142.1 235 35.7
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 5.8e-32 142.1 235 37.0
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.8e-32 142.1 243 37.9
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 7.6e-32 141.7 238 35.3
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 7.6e-32 141.7 238 35.7
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 7.6e-32 141.7 235 36.6
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 9.9e-32 141.4 238 35.3
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 9.9e-32 141.4 236 36.0
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 9.9e-32 141.4 236 36.9
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.3e-31 141.0 235 35.7
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 1.3e-31 141.0 238 35.3
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 1.7e-31 140.6 235 36.6
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.7e-31 140.6 235 36.2
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 2.9e-31 139.8 240 35.8
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 3.8e-31 139.4 238 36.1
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 4.9e-31 139.0 238 35.3
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 6.4e-31 138.7 238 36.1
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 1.4e-30 137.5 238 34.9
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 2.4e-30 136.7 238 35.7
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 3.2e-30 136.3 238 34.9
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 4.2e-30 136.0 238 36.1
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 4.2e-30 136.0 238 34.9
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 5.4e-30 135.6 261 34.9
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 5.4e-30 135.6 251 35.9
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 7.1e-30 135.2 235 35.3
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 9.3e-30 134.8 258 35.3
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 1.6e-29 134.0 235 34.5
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 2.7e-29 133.3 238 34.9
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 2.7e-29 133.3 236 35.6
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 7.9e-29 131.7 238 34.0
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 1.7e-28 130.6 253 34.8
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 3.0e-28 129.8 238 34.0
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 1.5e-27 127.5 238 34.0
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.5e-27 127.5 238 34.0
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 4.3e-27 125.9 235 35.7
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 1.3e-26 124.4 240 33.8
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 1.3e-26 124.4 180 40.6
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 1.6e-26 124.0 236 32.2
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 8.1e-26 121.7 191 36.1
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 1.1e-25 121.3 238 33.2
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 6.9e-25 118.6 292 28.8
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.5e-24 115.9 240 32.5
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.8e-24 115.5 240 32.9
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.5e-21 106.3 189 35.4
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.3e-20 104.4 328 26.2
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 1.8e-20 104.0 165 38.2
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 2.3e-20 103.6 166 34.9
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 7.4e-19 98.6 115 41.7
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 2.1e-18 97.1 131 35.9
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.6e-16 90.1 168 33.9
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.6e-16 90.1 168 33.9
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.6e-16 90.1 168 33.9
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.4e-16 89.7 131 38.9
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 6.5e-15 85.5 135 34.8
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 2.3e-12 77.0 108 36.1
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 2.5e-11 73.6 92 38.0
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 3.1e-09 66.6 234 24.8
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.4e-08 63.2 113 34.5


User provided reference genes

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