Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G468 Micromonas commoda HOM05D006956 ORTHO05D008824 9.7e-153 543.5 285 100.0
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 3.0e-13 80.1 184 33.2
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 3.0e-13 80.1 177 31.6
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 5.0e-08 62.8 85 41.2
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 5.0e-08 62.8 89 40.4
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 6.5e-08 62.4 85 41.2
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 6.5e-08 62.4 85 42.4
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 1.1e-07 61.6 85 42.4
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.5e-07 61.2 85 42.4
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.5e-07 61.2 85 44.7
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 2.5e-07 60.5 85 42.4
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 2.5e-07 60.5 85 42.4
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 4.2e-07 59.7 85 42.4
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 4.2e-07 59.7 85 40.0
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 4.2e-07 59.7 85 40.0
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 5.5e-07 59.3 167 31.1
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 5.5e-07 59.3 85 44.7
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 7.2e-07 58.9 85 41.2
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 7.2e-07 58.9 84 41.7
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 7.2e-07 58.9 85 43.5
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 9.4e-07 58.5 90 43.3
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 9.4e-07 58.5 85 41.2
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.2e-06 58.2 85 42.4
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 1.6e-06 57.8 85 41.2
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 2.1e-06 57.4 167 30.5
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 2.1e-06 57.4 89 39.3
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 2.7e-06 57.0 85 41.2
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.7e-06 57.0 85 40.0
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 2.7e-06 57.0 100 37.0
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 3.6e-06 56.6 85 42.4
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 3.6e-06 56.6 85 40.0
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 4.7e-06 56.2 85 41.2
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 4.7e-06 56.2 85 41.2
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 4.7e-06 56.2 85 41.2
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 6.1e-06 55.8 85 40.0
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 6.1e-06 55.8 85 40.0
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 6.1e-06 55.8 90 40.0
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 6.1e-06 55.8 85 41.2
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 6.1e-06 55.8 85 41.2
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 6.1e-06 55.8 85 40.0
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 8.0e-06 55.5 85 41.2
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 8.0e-06 55.5 85 37.6
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 8.0e-06 55.5 89 37.1


User provided reference genes

Program Settings