Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G393 Micromonas commoda HOM05D005557 ORTHO05D006748 3.9e-111 404.8 206 100.0
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 1.0e-26 124.4 199 34.2
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 2.3e-26 123.2 199 33.7
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 2.3e-26 123.2 200 35.5
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 6.6e-26 121.7 199 35.7
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 1.5e-25 120.6 199 36.7
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 1.5e-25 120.6 200 35.0
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 1.9e-25 120.2 203 35.5
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 4.3e-25 119.0 199 33.2
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 7.3e-25 118.2 201 32.8
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 7.3e-25 118.2 199 33.7
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 9.5e-25 117.9 193 35.8
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 9.5e-25 117.9 202 33.2
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 1.2e-24 117.5 193 35.2
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 1.2e-24 117.5 199 33.7
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 2.8e-24 116.3 201 32.3
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 2.8e-24 116.3 199 33.2
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 3.6e-24 115.9 199 32.2
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 3.6e-24 115.9 199 33.7
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 6.1e-24 115.2 193 36.3
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 6.1e-24 115.2 199 33.2
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 6.1e-24 115.2 199 32.2
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 6.1e-24 115.2 200 33.0
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 1.0e-23 114.4 198 33.8
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 1.0e-23 114.4 203 32.0
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 1.0e-23 114.4 202 30.2
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 1.0e-23 114.4 198 33.3
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 1.4e-23 114.0 205 31.2
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 1.4e-23 114.0 199 31.2
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 1.4e-23 114.0 199 32.7
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 1.8e-23 113.6 199 33.2
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 1.8e-23 113.6 199 33.2
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 2.3e-23 113.2 199 32.7
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 2.3e-23 113.2 199 32.7
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 2.3e-23 113.2 200 33.0
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 2.3e-23 113.2 199 31.2
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 2.3e-23 113.2 199 30.7
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 2.3e-23 113.2 199 32.7
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 3.0e-23 112.8 199 32.2
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 3.0e-23 112.8 199 32.2
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 4.0e-23 112.5 199 33.2
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 4.0e-23 112.5 198 33.3
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 6.8e-23 111.7 200 32.0
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 6.8e-23 111.7 199 32.2
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 8.9e-23 111.3 199 32.2
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 8.9e-23 111.3 199 33.2
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 1.2e-22 110.9 199 33.2
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 1.2e-22 110.9 199 31.7
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 1.2e-22 110.9 198 30.8
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.2e-22 110.9 198 30.8
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.2e-22 110.9 198 30.8
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.2e-22 110.9 198 30.8
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 1.2e-22 110.9 201 30.3
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 1.5e-22 110.5 199 32.2
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 1.5e-22 110.5 199 31.7
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 1.5e-22 110.5 199 30.7
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 2.0e-22 110.2 192 32.3
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 2.6e-22 109.8 199 31.7
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 2.6e-22 109.8 195 31.8
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 3.4e-22 109.4 201 30.8
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 3.4e-22 109.4 203 31.5
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 4.4e-22 109.0 199 31.2
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 7.5e-22 108.2 199 29.6
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 9.8e-22 107.8 204 30.9
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 9.8e-22 107.8 203 31.5
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 9.8e-22 107.8 199 32.2
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 9.8e-22 107.8 199 31.2
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 9.8e-22 107.8 199 30.2
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 1.3e-21 107.5 195 31.8
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 1.3e-21 107.5 200 32.0
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 1.7e-21 107.1 204 31.4
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 1.7e-21 107.1 201 31.3
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 2.2e-21 106.7 203 31.0
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 2.9e-21 106.3 198 33.3
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 3.7e-21 105.9 203 30.5
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 4.9e-21 105.5 203 31.0
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 4.9e-21 105.5 200 30.5
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 6.4e-21 105.1 194 32.5
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 6.4e-21 105.1 203 30.5
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 8.3e-21 104.8 203 31.5
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 8.3e-21 104.8 199 30.7
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 1.4e-20 104.0 204 30.9
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 1.4e-20 104.0 204 30.9
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 1.4e-20 104.0 206 31.6
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 1.4e-20 104.0 203 30.5
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 1.8e-20 103.6 198 32.8
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 1.8e-20 103.6 199 30.7
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 1.8e-20 103.6 202 30.7
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 1.8e-20 103.6 199 30.7
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 1.8e-20 103.6 223 29.6
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 2.4e-20 103.2 203 30.5
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 2.4e-20 103.2 205 30.2
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 2.4e-20 103.2 203 30.0
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 2.4e-20 103.2 204 31.4
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 2.4e-20 103.2 204 31.4
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 3.2e-20 102.8 186 32.3
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 4.1e-20 102.4 203 31.5
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 5.4e-20 102.1 199 31.2
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 7.0e-20 101.7 203 30.5
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 7.0e-20 101.7 192 30.7
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 1.2e-19 100.9 199 31.7
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 1.2e-19 100.9 201 28.4
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 2.0e-19 100.1 204 29.9
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 2.0e-19 100.1 199 30.2
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 2.7e-19 99.8 204 29.9
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 2.7e-19 99.8 194 30.9
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 3.5e-19 99.4 186 32.3
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 7.8e-19 98.2 207 31.9
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 1.0e-18 97.8 175 32.6
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 1.7e-18 97.1 212 28.8
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 6.6e-18 95.1 186 29.6
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 1.9e-17 93.6 203 30.0
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 2.5e-17 93.2 198 28.8
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 7.3e-17 91.7 168 32.7
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 1.2e-16 90.9 220 27.3
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 8.0e-16 88.2 226 27.4
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 1.4e-15 87.4 189 31.7
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 2.3e-15 86.7 176 31.2
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 1.3e-13 80.9 174 30.5
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 2.9e-13 79.7 154 30.5
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 3.5e-11 72.8 174 27.0
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 2.3e-10 70.1 187 27.8
Cre06.g269550 Chlamydomonas reinhardtii HOM05D005557 ORTHO05D006748 1.5e-09 67.4 152 29.6
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 3.3e-09 66.2 126 30.2
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 4.3e-09 65.9 152 31.6
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea HOM05D005557 ORTHO05D006748 1.8e-07 60.5 96 31.2
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea HOM05D005557 ORTHO05D006748 8.9e-07 58.2 96 31.2


User provided reference genes

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