Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 1.0e-114 416.8 214 100.0
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 4.6e-30 135.6 224 39.3
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 6.0e-30 135.2 224 38.8
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 1.0e-29 134.4 224 38.4
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 3.0e-29 132.9 224 38.8
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 1.1e-28 131.0 224 34.8
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 4.3e-28 129.0 219 38.8
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 5.6e-28 128.6 224 37.5
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 9.5e-28 127.9 219 38.4
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 1.2e-27 127.5 224 37.1
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 1.6e-27 127.1 224 37.1
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 2.1e-27 126.7 221 37.1
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 2.8e-27 126.3 225 37.3
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 2.8e-27 126.3 224 37.5
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 3.6e-27 125.9 224 37.1
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 3.6e-27 125.9 224 36.6
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 8.1e-27 124.8 218 38.1
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.1e-26 124.4 221 37.1
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.1e-26 124.4 224 37.1
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 1.4e-26 124.0 221 38.0
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.4e-26 124.0 232 37.1
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 1.8e-26 123.6 224 36.6
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 1.8e-26 123.6 221 36.7
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.8e-26 123.6 222 36.0
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 2.3e-26 123.2 224 35.3
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 4.0e-26 122.5 218 37.6
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 6.8e-26 121.7 223 36.3
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 6.8e-26 121.7 221 38.0
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 6.8e-26 121.7 222 36.9
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 6.8e-26 121.7 221 37.1
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 8.9e-26 121.3 221 37.1
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 8.9e-26 121.3 221 36.7
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.2e-25 120.9 224 37.1
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 1.2e-25 120.9 218 36.7
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.5e-25 120.6 221 35.3
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 2.0e-25 120.2 223 35.0
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 2.6e-25 119.8 224 36.2
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 3.4e-25 119.4 223 35.0
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 3.4e-25 119.4 225 35.6
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 4.4e-25 119.0 223 34.5
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 5.8e-25 118.6 223 34.5
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 5.8e-25 118.6 223 34.5
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 5.8e-25 118.6 224 37.1
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 7.5e-25 118.2 223 34.5
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 7.5e-25 118.2 223 35.4
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 9.8e-25 117.9 224 37.1
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 9.8e-25 117.9 221 36.2
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 1.3e-24 117.5 223 34.5
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.3e-24 117.5 226 36.3
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.7e-24 117.1 222 37.4
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 2.2e-24 116.7 222 36.5
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 2.2e-24 116.7 222 36.9
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 2.2e-24 116.7 221 33.9
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 2.2e-24 116.7 223 35.9
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 2.9e-24 116.3 220 34.1
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 2.9e-24 116.3 221 37.1
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 3.7e-24 115.9 224 35.3
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 3.7e-24 115.9 224 37.1
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 4.9e-24 115.5 221 36.7
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 6.4e-24 115.2 221 34.4
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 6.4e-24 115.2 224 35.3
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 8.3e-24 114.8 221 33.9
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 8.3e-24 114.8 221 33.9
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 8.3e-24 114.8 221 35.3
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 1.1e-23 114.4 223 33.2
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 1.4e-23 114.0 223 34.5
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.4e-23 114.0 239 34.7
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 1.4e-23 114.0 221 34.8
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 1.4e-23 114.0 221 36.2
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.9e-23 113.6 220 34.1
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 2.4e-23 113.2 223 33.6
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 2.4e-23 113.2 223 35.9
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 3.2e-23 112.8 217 35.5
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 9.2e-23 111.3 221 36.7
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.2e-22 110.9 221 33.9
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 1.6e-22 110.5 221 33.9
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 1.6e-22 110.5 220 34.5
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 1.6e-22 110.5 222 34.7
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 2.1e-22 110.2 221 33.9
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 2.1e-22 110.2 256 33.2
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 2.1e-22 110.2 233 34.8
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.7e-22 109.8 224 35.7
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 3.5e-22 109.4 214 32.7
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.6e-22 109.0 221 33.5
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 6.0e-22 108.6 213 33.3
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 6.0e-22 108.6 224 36.2
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.3e-21 107.5 249 34.1
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 3.0e-21 106.3 221 33.9
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 3.9e-21 105.9 221 33.5
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 8.6e-21 104.8 217 34.6
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 1.5e-20 104.0 221 33.5
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 5.6e-20 102.1 199 35.7
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 9.5e-20 101.3 245 32.7
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.8e-19 99.8 196 33.2
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 3.6e-19 99.4 221 35.3
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 8.1e-19 98.2 197 34.5
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.4e-18 97.4 195 35.4
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 1.8e-18 97.1 192 34.4
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 3.1e-18 96.3 191 34.6
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 5.2e-18 95.5 146 38.4
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 6.8e-18 95.1 196 34.7
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 2.0e-17 93.6 192 32.8
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 4.4e-17 92.4 221 33.5
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.3e-16 90.9 190 33.7
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 2.2e-16 90.1 220 31.4
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.2e-16 90.1 192 32.3
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.8e-16 89.4 192 31.8
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 6.4e-16 88.6 192 31.2
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 7.3e-12 75.1 175 31.4
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 8.9e-10 68.2 198 31.3
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 6.4e-08 62.0 223 27.8
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 7.1e-07 58.5 149 34.9


User provided reference genes

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