Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 7.9e-216 753.4 365 100.0
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 1.8e-63 247.3 332 43.7
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.6e-38 164.5 316 36.4
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 5.6e-36 156.0 295 36.3
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 1.2e-35 154.8 336 34.2
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 1.8e-34 151.0 339 31.6
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 2.3e-34 150.6 328 33.2
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 3.4e-33 146.7 310 33.5
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.7e-32 144.4 308 32.1
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.4e-31 141.4 321 32.7
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 2.4e-31 140.6 319 33.9
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 3.2e-31 140.2 321 32.4
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 4.1e-31 139.8 313 33.5
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 4.1e-31 139.8 293 33.1
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 7.0e-31 139.0 318 33.3
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 1.2e-30 138.3 321 31.2
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 2.0e-30 137.5 321 32.1
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 2.7e-30 137.1 323 31.9
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 4.6e-30 136.3 321 32.7
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 7.8e-30 135.6 316 33.9
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 7.8e-30 135.6 335 31.3
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 7.8e-30 135.6 323 31.3
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 7.8e-30 135.6 315 33.7
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 1.0e-29 135.2 316 33.9
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 1.0e-29 135.2 336 31.0
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 1.3e-29 134.8 333 31.2
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 1.3e-29 134.8 323 31.3
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 2.3e-29 134.0 318 31.8
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 3.0e-29 133.7 327 32.1
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 3.9e-29 133.3 323 30.7
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 3.9e-29 133.3 325 31.1
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 5.0e-29 132.9 325 31.4
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 5.0e-29 132.9 319 32.0
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 6.6e-29 132.5 320 32.5
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 6.6e-29 132.5 322 32.9
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 6.6e-29 132.5 343 30.9
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 6.6e-29 132.5 323 31.0
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 8.6e-29 132.1 323 30.7
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 8.6e-29 132.1 331 31.1
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 1.1e-28 131.7 325 31.7
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 1.1e-28 131.7 322 32.9
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 1.1e-28 131.7 341 30.2
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 1.5e-28 131.3 330 30.9
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 1.9e-28 131.0 330 31.8
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 1.9e-28 131.0 323 31.0
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 2.5e-28 130.6 324 31.8
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 2.5e-28 130.6 369 31.2
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 4.3e-28 129.8 324 32.7
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 5.6e-28 129.4 323 31.3
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 5.6e-28 129.4 325 32.0
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 5.6e-28 129.4 383 31.3
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 5.6e-28 129.4 324 31.5
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 7.3e-28 129.0 327 31.5
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 9.5e-28 128.6 341 30.5
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 9.5e-28 128.6 323 31.0
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.2e-27 128.3 341 31.1
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 2.8e-27 127.1 326 31.3
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 2.8e-27 127.1 324 30.6
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 3.6e-27 126.7 326 31.9
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 4.7e-27 126.3 326 31.3
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 6.2e-27 125.9 328 31.1
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 1.4e-26 124.8 289 32.9
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 1.8e-26 124.4 323 29.7
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 1.8e-26 124.4 323 30.3
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 1.8e-26 124.4 341 29.6
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 2.3e-26 124.0 338 30.2
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 4.0e-26 123.2 329 31.6
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 1.2e-25 121.7 350 30.0
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 2.6e-25 120.6 318 31.8
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 3.4e-25 120.2 348 29.3
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 4.4e-25 119.8 360 29.7
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.3e-24 118.2 341 28.7
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 1.7e-24 117.9 339 30.1
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 2.2e-24 117.5 319 31.0
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 8.3e-24 115.5 326 29.1
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 1.4e-23 114.8 320 28.8
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 2.4e-23 114.0 309 32.7
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 5.4e-23 112.8 352 29.5
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 3.9e-21 106.7 359 27.3
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 1.1e-20 105.1 210 32.4
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 1.9e-20 104.4 203 32.5
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 7.3e-20 102.4 200 33.0
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 1.2e-19 101.7 200 33.5
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 1.6e-19 101.3 200 33.5
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 1.1e-18 98.6 205 31.2
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.0e-17 94.4 329 28.6
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 5.8e-17 92.8 188 31.9
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 7.1e-15 85.9 284 27.5
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 2.1e-14 84.3 426 23.7
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 1.0e-13 82.0 227 29.1
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 1.1e-12 78.6 110 37.3
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 7.3e-12 75.9 110 35.5
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 8.9e-10 68.9 105 37.1
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 4.4e-09 66.6 129 38.0


User provided reference genes

Program Settings