Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 9.7e-124 446.8 225 100.0
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 9.4e-10 68.2 125 34.4
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.6e-09 67.4 141 28.4
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 2.1e-09 67.0 124 27.4
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 2.1e-09 67.0 221 26.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 2.7e-09 66.6 215 27.4
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 4.7e-09 65.9 216 27.3
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 8.0e-09 65.1 124 25.8
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.0e-08 64.7 126 30.2
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 1.4e-08 64.3 124 25.0
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.8e-08 63.9 125 28.8
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 1.8e-08 63.9 229 26.6
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 4.0e-08 62.8 216 29.2
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 5.2e-08 62.4 124 29.0
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 5.2e-08 62.4 132 27.3
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 6.7e-08 62.0 229 25.8
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 8.8e-08 61.6 124 25.0
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.1e-07 61.2 125 28.0
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.5e-07 60.8 124 28.2
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 1.5e-07 60.8 125 27.2
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 2.0e-07 60.5 126 28.6
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 2.6e-07 60.1 223 24.7
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.6e-07 60.1 133 26.3
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 2.6e-07 60.1 125 27.2
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 5.7e-07 58.9 123 27.6
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 7.5e-07 58.5 126 27.8
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 7.5e-07 58.5 125 27.2
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 7.5e-07 58.5 124 28.2
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 7.5e-07 58.5 133 26.3
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 7.5e-07 58.5 114 27.2
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 9.7e-07 58.2 125 24.8
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 9.7e-07 58.2 223 26.0
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.3e-06 57.8 219 25.1
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 1.7e-06 57.4 211 25.6
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.7e-06 57.4 125 25.6
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.7e-06 57.4 215 26.0
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.7e-06 57.4 223 24.7
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 2.2e-06 57.0 215 26.5
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 2.8e-06 56.6 221 25.3
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 2.8e-06 56.6 230 23.9
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.7e-06 56.2 125 25.6
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 3.7e-06 56.2 215 25.1
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 3.7e-06 56.2 125 25.6
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 4.8e-06 55.8 125 25.6
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 4.8e-06 55.8 218 28.0
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 4.8e-06 55.8 214 26.2
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 4.8e-06 55.8 216 25.9
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 6.3e-06 55.5 216 28.2
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 6.3e-06 55.5 225 27.6
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 6.3e-06 55.5 214 25.2
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 6.3e-06 55.5 214 25.2
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 8.2e-06 55.1 214 23.8
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 8.2e-06 55.1 219 22.4
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 8.2e-06 55.1 220 25.5


User provided reference genes

Program Settings