Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G198 Micromonas commoda HOM05D005096 ORTHO05D006566 0.0e+00 1718.0 1015 100.0
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 3.5e-112 410.6 987 34.1
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 6.6e-111 406.4 976 33.8
PRCOL_00001755 Prasinoderma coloniale HOM05D005096 ORTHO05D006566 3.6e-109 400.6 964 35.9
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 4.0e-108 397.1 963 34.5
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 7.0e-105 386.3 980 33.2
Cre14.g616600 Chlamydomonas reinhardtii HOM05D005096 ORTHO05D006566 1.2e-101 375.6 1021 35.3
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 7.3e-86 323.2 947 29.0
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 2.1e-85 321.6 955 30.2
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 4.7e-85 320.5 955 29.9
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.1e-84 319.3 947 29.0
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 3.1e-84 317.8 950 29.3
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 3.1e-84 317.8 951 28.7
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 4.0e-84 317.4 939 29.1
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 6.9e-84 316.6 962 28.9
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 8.9e-84 316.2 952 28.5
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 2.6e-83 314.7 951 29.8
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 7.6e-83 313.2 934 28.3
Os05g0390100 Oryza sativa ssp. japonica HOM05D005096 ORTHO05D006566 9.9e-83 312.8 902 28.7
Gohir.A08G067500 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.3e-82 312.4 723 32.5
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 3.8e-82 310.8 950 29.7
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 3.8e-82 310.8 946 28.8
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 1.9e-81 308.5 954 28.4
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 2.4e-81 308.1 950 28.5
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 2.4e-81 308.1 948 28.7
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 2.4e-81 308.1 934 28.2
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 7.1e-81 306.6 946 28.4
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 1.2e-80 305.8 948 28.8
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 1.2e-80 305.8 680 34.6
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 1.6e-80 305.4 951 29.0
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 2.1e-80 305.1 952 28.6
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 2.7e-80 304.7 923 28.7
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 2.7e-80 304.7 948 28.4
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 3.5e-80 304.3 950 28.7
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 4.6e-80 303.9 952 27.8
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 1.0e-79 302.8 953 28.8
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 1.0e-79 302.8 949 28.8
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 1.0e-79 302.8 956 27.8
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 8.7e-79 299.7 947 28.2
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 1.1e-78 299.3 944 28.6
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 1.5e-78 298.9 677 34.3
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 1.5e-78 298.9 948 28.5
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 1.9e-78 298.5 950 28.5
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 1.9e-78 298.5 945 28.8
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 2.5e-78 298.1 955 29.3
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 3.3e-78 297.7 948 28.1
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 3.3e-78 297.7 952 28.9
Solyc09g065160.4 Solanum lycopersicum HOM05D005096 ORTHO05D006566 3.3e-78 297.7 684 33.9
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 4.3e-78 297.4 949 28.5
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 4.3e-78 297.4 956 28.5
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 1.3e-77 295.8 951 28.5
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 2.1e-77 295.0 950 27.9
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 2.8e-77 294.7 945 28.4
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 6.2e-77 293.5 944 28.2
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 6.2e-77 293.5 952 28.0
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 6.2e-77 293.5 945 28.0
AT1G03160 Arabidopsis thaliana HOM05D005096 ORTHO05D006566 8.1e-77 293.1 623 34.3
Hma1.2p1_0257F.1_g103450 Hydrangea macrophylla HOM05D005096 ORTHO05D006566 8.1e-77 293.1 624 34.0
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 1.1e-76 292.7 992 28.2
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 1.8e-76 292.0 682 33.0
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 2.4e-76 291.6 949 27.9
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 2.4e-76 291.6 950 27.9
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 2.4e-76 291.6 955 28.6
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 3.1e-76 291.2 963 28.2
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 3.1e-76 291.2 951 28.7
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 9.0e-76 289.7 952 28.7
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 1.5e-75 288.9 952 28.5
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 2.6e-75 288.1 951 28.8
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 2.6e-75 288.1 954 29.5
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 2.6e-75 288.1 951 27.0
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 4.5e-75 287.3 948 28.6
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 7.6e-75 286.6 901 29.2
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 9.9e-75 286.2 897 28.9
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 9.9e-75 286.2 681 32.2
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 1.3e-74 285.8 949 28.2
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 2.2e-74 285.0 956 28.3
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 2.2e-74 285.0 953 28.2
PGR119G0033 Punica granatum HOM05D005096 ORTHO05D006566 2.9e-74 284.6 681 31.9
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 4.9e-74 283.9 948 28.4
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 6.4e-74 283.5 953 28.0
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 6.4e-74 283.5 964 28.7
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 8.4e-74 283.1 952 27.7
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 8.4e-74 283.1 952 27.7
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 8.4e-74 283.1 953 28.1
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 1.1e-73 282.7 965 27.5
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 1.4e-73 282.3 934 27.6
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 1.9e-73 282.0 962 28.9
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 2.4e-73 281.6 955 28.2
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 4.2e-73 280.8 951 28.3
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 7.1e-73 280.0 1038 28.5
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 7.1e-73 280.0 948 27.5
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 2.7e-72 278.1 963 28.2
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 4.6e-72 277.3 949 27.5
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 4.6e-72 277.3 954 27.6
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 1.5e-70 272.3 953 28.0
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.5e-70 272.3 952 26.9
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 4.3e-70 270.8 579 35.1
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.3e-69 269.2 723 30.4
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 1.4e-68 265.8 951 27.4
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 1.8e-68 265.4 952 27.8
Lalb_Chr02g0142781 Lupinus albus HOM05D005096 ORTHO05D006566 2.4e-65 255.0 367 40.9
Zm00001eb287190 Zea mays HOM05D005096 ORTHO05D006566 5.5e-65 253.8 697 28.1
Eucgr.H01482 Eucalyptus grandis HOM05D005096 ORTHO05D006566 3.0e-63 248.1 844 26.5
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 6.7e-63 246.9 583 32.1
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 2.5e-57 228.4 718 29.9
Duzib133G0424 Durio zibethinus HOM05D005096 ORTHO05D006566 9.3e-57 226.5 644 27.8
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.6e-56 225.7 902 26.6
MD11G1311700 Malus domestica HOM05D005096 ORTHO05D006566 4.8e-45 187.6 336 36.0
MD11G1312200 Malus domestica HOM05D005096 ORTHO05D006566 4.8e-45 187.6 336 36.0
MELO3C014401.2 Cucumis melo HOM05D005096 ORTHO05D006566 6.1e-40 170.6 566 26.1
Sabra02G0043400 Salix brachista HOM05D005096 ORTHO05D006566 7.4e-38 163.7 537 29.2
Hund05340 Selenicereus undatus HOM05D005096 ORTHO05D006566 2.9e-34 151.8 178 47.2
Potri.002G053332 Populus trichocarpa HOM05D005096 ORTHO05D006566 1.4e-28 132.9 233 37.8
MELO3C014400.2 Cucumis melo HOM05D005096 ORTHO05D008790 2.9e-26 125.2 353 31.7
AUR62043138 Chenopodium quinoa HOM05D005096 ORTHO05D006566 8.5e-26 123.6 332 33.7
Hund05386 Selenicereus undatus HOM05D005096 ORTHO05D006566 8.0e-24 117.1 370 30.3
Cpa.g.c40412 Carica papaya HOM05D005096 ORTHO05D006566 2.7e-19 102.1 260 27.7
Cpa.g.sc52.38 Carica papaya HOM05D005096 ORTHO05D006566 7.7e-19 100.5 260 28.5
MD11G1311400 Malus domestica HOM05D005096 ORTHO05D006566 1.2e-14 86.7 63 66.7
arahy.Tifrunner.gnm1.ann1.X3UYKF Arachis hypogaea HOM05D005525 ORTHO05D006341 2.0e-14 85.9 90 52.2
arahy.Tifrunner.gnm1.ann1.BB9JSJ Arachis hypogaea HOM05D000384 ORTHO05D000468 5.7e-14 84.3 132 40.9
SEGI_20481 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 5.7e-14 84.3 169 32.5
Migut.D00341 Erythranthe guttata HOM05D005096 ORTHO05D006566 1.7e-13 82.8 435 28.3
Cpa.g.c38803 Carica papaya HOM05D005096 ORTHO05D006566 4.8e-13 81.3 275 30.2
SEGI_24308 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.1e-12 80.1 52 67.3
arahy.Tifrunner.gnm1.ann1.K3B567 Arachis hypogaea HOM05D005525 ORTHO05D006341 4.1e-12 78.2 85 49.4
arahy.Tifrunner.gnm1.ann1.Y3S9ZW Arachis hypogaea HOM05D005525 ORTHO05D006341 4.1e-12 78.2 114 43.0
SEGI_14404 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.2e-11 76.6 308 30.2
Lalb_Chr02g0142771 Lupinus albus HOM05D005096 ORTHO05D006566 4.4e-06 58.2 311 27.3
Glyma.18G167550 Glycine max HOM05D005096 ORTHO05D006566 9.8e-06 57.0 88 40.9
SEGI_13636 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 9.8e-06 57.0 154 29.2


User provided reference genes

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