Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G049 Micromonas commoda HOM05D005298 ORTHO05D008015 0.0e+00 2249.9 1296 100.0
Mapoly0002s0222 Marchantia polymorpha HOM05D005298 ORTHO05D008015 1.1e-86 326.2 945 30.6
Pp3c21_7100 Physcomitrium patens HOM05D005298 ORTHO05D008015 3.3e-83 314.7 944 30.7
Pp3c21_7106 Physcomitrium patens HOM05D005298 ORTHO05D008015 3.3e-83 314.7 944 30.7
Pp3c27_6680 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.2e-80 306.2 972 29.7
Pp3c1_32943 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.4e-73 282.7 891 28.8
MBI18_g28901_MAGBIO Magnolia biondii HOM05D005298 ORTHO05D008015 4.2e-70 271.2 949 28.6
Lalb_Chr07g0181831 Lupinus albus HOM05D005298 ORTHO05D008015 9.4e-70 270.0 963 28.5
Glyma.17G038500 Glycine max HOM05D005298 ORTHO05D008015 6.1e-69 267.3 914 28.6
Lj4g0022536 Lotus japonicus HOM05D005298 ORTHO05D008015 2.8e-66 258.5 914 28.9
Psat0ss1196g0600 Pisum sativum HOM05D005298 ORTHO05D008015 6.3e-66 257.3 912 28.3
Aqoxy2G02567 Aquilegia oxysepala HOM05D005298 ORTHO05D008015 5.3e-65 254.2 956 28.0
arahy.Tifrunner.gnm1.ann1.68EF5E Arachis hypogaea HOM05D005298 ORTHO05D008015 2.0e-64 252.3 969 27.5
TPR.G12648 Trifolium pratense HOM05D005298 ORTHO05D008015 3.5e-64 251.5 909 27.9
Dinv29532 Davidia involucrata HOM05D005298 ORTHO05D008015 4.5e-64 251.1 958 27.7
SMO200G0212 Selaginella moellendorffii HOM05D005298 ORTHO05D008015 5.9e-64 250.8 972 27.8
Glyma.07G233500 Glycine max HOM05D005298 ORTHO05D008015 1.3e-63 249.6 961 28.5
Thecc.04G309800 Theobroma cacao HOM05D005298 ORTHO05D008015 2.2e-63 248.8 955 27.1
Cfa015712 Carpinus fangiana HOM05D005298 ORTHO05D008015 2.9e-63 248.4 1028 28.0
VMungo1215G2609 Vigna mungo HOM05D005298 ORTHO05D008015 2.9e-63 248.4 1153 28.1
Ca_21388_v3 Cicer arietinum L. HOM05D005298 ORTHO05D008015 8.5e-63 246.9 853 28.3
PSO210G1072 Papaver somniferum HOM05D005298 ORTHO05D008015 1.1e-62 246.5 954 26.9
COL.COLO4_34539 Corchorus olitorius HOM05D005298 ORTHO05D008015 1.2e-61 243.0 951 27.2
ATR0796G315 Amborella trichopoda HOM05D005298 ORTHO05D008015 1.6e-61 242.7 1152 26.5
arahy.Tifrunner.gnm1.ann1.WSVI3W Arachis hypogaea HOM05D005298 ORTHO05D008015 1.6e-61 242.7 965 27.4
QL06p013696 Quercus lobata HOM05D005298 ORTHO05D008015 1.6e-61 242.7 1054 27.2
Atru.chr4.3122 Acer truncatum HOM05D005298 ORTHO05D008015 2.7e-61 241.9 955 27.0
TAR362G0426 Trochodendron aralioides HOM05D005298 ORTHO05D008015 2.7e-61 241.9 906 29.6
Gohir.D02G063000 Gossypium hirsutum HOM05D005298 ORTHO05D008015 3.6e-61 241.5 948 28.8
Lsat_1_v5_gn_6_69380 Lactuca sativa HOM05D005298 ORTHO05D008015 4.7e-61 241.1 903 26.9
Gohir.A02G057201 Gossypium hirsutum HOM05D005298 ORTHO05D008015 6.1e-61 240.7 948 29.1
Oeu020287.1 Olea europaea HOM05D005298 ORTHO05D008015 6.1e-61 240.7 996 26.6
CSS0017624 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 8.0e-61 240.4 958 26.8
Gorai.005G070900 Gossypium raimondii HOM05D005298 ORTHO05D008015 1.4e-60 239.6 948 29.0
ECA233G2380 Erigeron canadensis HOM05D005298 ORTHO05D008015 1.8e-60 239.2 887 26.7
Phvul.003G119400 Phaseolus vulgaris HOM05D005298 ORTHO05D008015 1.8e-60 239.2 955 26.7
Nitab4.5_0000169g0140 Nicotiana tabacum HOM05D005298 ORTHO05D008015 6.7e-60 237.3 955 26.5
Ciclev10004217m.g Citrus clementina HOM05D005298 ORTHO05D008015 8.8e-60 236.9 953 25.9
MD16G1139700 Malus domestica HOM05D005298 ORTHO05D008015 1.2e-59 236.5 954 27.3
Hma1.2p1_0013F.1_g008000 Hydrangea macrophylla HOM05D005298 ORTHO05D008015 2.6e-59 235.3 897 28.0
CANSAT78G1118 Cannabis sativa HOM05D005298 ORTHO05D008015 5.7e-59 234.2 1004 26.0
CiPaw.01G131300 Carya illinoinensis HOM05D005298 ORTHO05D008015 9.7e-59 233.4 957 28.3
HanXRQChr09g0251541 Helianthus annuus HOM05D005298 ORTHO05D008015 1.3e-58 233.0 935 27.1
Sopen01g022220 Solanum pennellii HOM05D005298 ORTHO05D008015 1.3e-58 233.0 951 26.0
Prupe.1G109100 Prunus persica HOM05D005298 ORTHO05D008015 2.8e-58 231.9 948 26.9
CsaV3_6G000130 Cucumis sativus L. HOM05D005298 ORTHO05D008015 3.7e-58 231.5 912 26.5
Solyc01g057520.4 Solanum lycopersicum HOM05D005298 ORTHO05D008015 3.7e-58 231.5 952 26.1
Actinidia18497 Actinidia chinensis HOM05D005298 ORTHO05D008015 4.8e-58 231.1 902 26.7
DCAR_002539 Daucus carota HOM05D005298 ORTHO05D008015 1.1e-57 229.9 956 25.9
Rhsim04G0246500 Rhododendron simsii HOM05D005298 ORTHO05D008015 1.4e-57 229.6 955 26.9
Zm00001eb164790 Zea mays HOM05D005298 ORTHO05D008015 1.8e-57 229.2 975 26.7
Sabra10G0117500 Salix brachista HOM05D005298 ORTHO05D008015 3.1e-57 228.4 963 25.8
Potri.010G152700 Populus trichocarpa HOM05D005298 ORTHO05D008015 4.1e-57 228.0 960 26.9
PGR004G2663 Punica granatum HOM05D005298 ORTHO05D008015 2.7e-56 225.3 955 28.8
Haze_00801 Corylus avellana HOM05D005298 ORTHO05D008015 1.3e-55 223.0 1004 27.0
RcHm_v2.0_Chr4g0426661 Rosa chinensis HOM05D005298 ORTHO05D008015 3.8e-55 221.5 958 27.9
Manes.15G003700 Manihot esculenta HOM05D005298 ORTHO05D008015 6.5e-55 220.7 957 26.3
Eucgr.H04107 Eucalyptus grandis HOM05D005298 ORTHO05D008015 1.1e-54 219.9 923 27.7
Os11g0695900 Oryza sativa ssp. japonica HOM05D005298 ORTHO05D008015 4.2e-54 218.0 1003 26.3
Lj3A839G57 Lonicera japonica HOM05D005298 ORTHO05D008015 1.2e-53 216.5 957 26.2
EL10Ac3g06277 Beta vulgaris HOM05D005298 ORTHO05D008015 3.6e-53 214.9 1152 26.4
Ah.07g203800 Amaranthus hybridus HOM05D005298 ORTHO05D008015 4.7e-53 214.5 947 26.2
Sed0008409 Sechium edule HOM05D005298 ORTHO05D008015 6.1e-53 214.2 921 26.4
PRCOL_00002040 Prasinoderma coloniale HOM05D005298 ORTHO05D008015 8.0e-53 213.8 869 29.2
Medtr4g123690 Medicago truncatula HOM05D005298 ORTHO05D008015 6.8e-52 210.7 438 34.9
Nitab4.5_0000992g0090 Nicotiana tabacum HOM05D005298 ORTHO05D008015 6.8e-52 210.7 955 25.9
AL3G30390 Arabidopsis lyrata HOM05D005298 ORTHO05D008015 1.2e-51 209.9 966 25.3
CAN.G14.34 Capsicum annuum HOM05D005298 ORTHO05D008015 1.2e-51 209.9 1000 25.0
Carub.0003s1705 Capsella rubella HOM05D005298 ORTHO05D008015 2.0e-51 209.1 963 25.8
Thhalv10019950m.g Eutrema salsugineum HOM05D005298 ORTHO05D008015 3.4e-51 208.4 965 26.2
FvH4_4g21110 Fragaria vesca HOM05D005298 ORTHO05D008015 5.7e-51 207.6 957 27.4
C05p49050 Brassica napus HOM05D005298 ORTHO05D008015 7.5e-51 207.2 904 25.7
BcaC05g28796 Brassica carinata HOM05D005298 ORTHO05D008015 9.8e-51 206.8 900 25.9
BolC5t33645H Brassica oleracea HOM05D005298 ORTHO05D008015 9.8e-51 206.8 904 26.0
FAN17G0175 Fragaria x ananassa HOM05D005298 ORTHO05D008015 2.2e-50 205.7 957 27.2
Nn3g21868 Nelumbo nucifera HOM05D005298 ORTHO05D008015 2.4e-49 202.2 564 31.9
Cpa.g.sc146.46 Carica papaya HOM05D005298 ORTHO05D008015 5.4e-49 201.1 583 28.5
FAN07G1807 Fragaria x ananassa HOM05D005298 ORTHO05D008015 7.0e-49 200.7 972 26.9
GSVIVG01034907001 Vitis vinifera HOM05D005298 ORTHO05D008015 2.0e-48 199.1 647 28.4
Sp3g15510 Schrenkiella parvula HOM05D005298 ORTHO05D008015 2.7e-48 198.7 999 25.5
AT3G17340 Arabidopsis thaliana HOM05D005298 ORTHO05D008015 3.5e-48 198.4 1004 24.5
CARHR092660 Cardamine hirsuta HOM05D005298 ORTHO05D008015 5.9e-48 197.6 700 27.9
Peaxi162Scf00126g10123 Petunia axillaris HOM05D005298 ORTHO05D008015 3.8e-47 194.9 953 24.9
ClCG06G004280 Citrullus lanatus HOM05D005298 ORTHO05D008015 6.5e-47 194.1 719 28.0
Aa31LG8G4260 Aethionema arabicum HOM05D005298 ORTHO05D008015 4.2e-46 191.4 985 24.9
BraA05t22069Z Brassica rapa HOM05D005298 ORTHO05D008015 1.2e-45 189.9 903 24.9
A05p32420 Brassica napus HOM05D005298 ORTHO05D008015 2.1e-45 189.1 904 25.2
AUR62029998 Chenopodium quinoa HOM05D005298 ORTHO05D008015 6.1e-45 187.6 953 24.3
vmacro07993 Vaccinium macrocarpon HOM05D005298 ORTHO05D008015 6.1e-45 187.6 637 27.3
MELO3C021240.2 Cucumis melo HOM05D005298 ORTHO05D008015 7.0e-41 174.1 543 28.5
TWI09G0537 Tripterygium wilfordii HOM05D005298 ORTHO05D008015 1.2e-40 173.3 1017 24.7
CSS0004853 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 1.0e-39 170.2 684 26.3
Duzib151G1192 Durio zibethinus HOM05D005298 ORTHO05D008015 9.8e-35 153.7 1004 25.6
GSVIVG01017664001 Vitis vinifera HOM05D005298 ORTHO05D008015 2.4e-25 122.5 955 23.0
Mapoly0011s0083 Marchantia polymorpha HOM05D005298 ORTHO05D008015 1.9e-22 112.8 602 23.8
Zm00001eb304680 Zea mays HOM05D005298 ORTHO05D008015 5.4e-17 94.7 304 28.9
GSVIVG01017598001 Vitis vinifera HOM05D005298 ORTHO05D008015 5.1e-15 88.2 83 44.6
Pp3c1_32940 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.1e-14 87.0 423 26.2
Cc03_g00330 Coffea canephora HOM05D005298 ORTHO05D008015 4.3e-14 85.1 432 24.5
SEGI_25654 Sequoiadendron giganteum HOM05D005298 ORTHO05D008015 3.1e-12 79.0 447 25.5
SEGI_33872 Sequoiadendron giganteum HOM05D005298 ORTHO05D008015 7.6e-11 74.3 84 41.7
SEGI_08042 Sequoiadendron giganteum HOM05D005298 ORTHO05D008015 1.7e-10 73.2 144 34.0
Zm00001eb026980 Zea mays HOM05D005298 ORTHO05D008015 4.1e-09 68.6 164 32.3
Medtr4g123670 Medicago truncatula HOM05D005298 ORTHO05D008015 1.9e-06 59.7 403 23.3


User provided reference genes

Program Settings