Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 6.7e-168 594.0 308 100.0
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 4.0e-51 206.1 312 40.1
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.5e-50 204.1 312 42.0
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 2.2e-49 200.3 307 40.1
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 1.1e-45 188.0 313 39.6
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.6e-44 184.1 307 38.1
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 4.4e-42 176.0 285 41.1
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 4.1e-40 169.5 306 36.3
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 4.1e-40 169.5 306 37.3
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 1.6e-39 167.5 306 35.6
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 2.0e-39 167.2 306 35.6
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 2.7e-39 166.8 306 36.6
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 2.7e-39 166.8 312 35.9
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 4.5e-39 166.0 306 35.6
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 7.7e-39 165.2 310 37.7
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 7.7e-39 165.2 310 35.2
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 1.7e-38 164.1 306 35.9
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 1.7e-38 164.1 306 35.6
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 2.3e-38 163.7 306 34.6
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 2.3e-38 163.7 306 36.6
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 2.9e-38 163.3 306 35.6
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.9e-38 163.3 306 35.9
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 3.8e-38 162.9 306 35.3
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 3.8e-38 162.9 306 36.3
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 6.6e-38 162.2 306 35.6
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 1.1e-37 161.4 306 35.0
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.1e-37 161.4 306 36.3
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.1e-37 161.4 306 36.3
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 1.1e-37 161.4 306 35.3
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 1.1e-37 161.4 306 35.3
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.1e-37 161.4 306 36.3
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 1.5e-37 161.0 306 35.3
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 1.9e-37 160.6 301 35.5
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.9e-37 160.6 306 35.0
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 2.5e-37 160.2 301 35.5
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 2.5e-37 160.2 306 35.6
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 2.5e-37 160.2 306 34.0
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 3.3e-37 159.8 306 34.0
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 4.2e-37 159.5 306 34.3
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.2e-37 159.5 306 34.3
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 4.2e-37 159.5 306 34.3
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 5.5e-37 159.1 306 32.7
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 7.2e-37 158.7 306 35.0
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 9.5e-37 158.3 306 35.9
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 9.5e-37 158.3 306 34.0
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 1.2e-36 157.9 306 36.3
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 1.2e-36 157.9 306 34.6
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 2.1e-36 157.1 301 34.9
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 2.1e-36 157.1 306 34.3
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 2.1e-36 157.1 305 35.1
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 4.7e-36 156.0 313 33.9
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 6.1e-36 155.6 307 35.8
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 6.1e-36 155.6 306 32.7
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 6.1e-36 155.6 293 35.8
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.0e-35 154.8 306 33.7
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.4e-35 154.5 306 34.6
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 1.4e-35 154.5 307 34.5
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.8e-35 154.1 306 34.3
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 2.3e-35 153.7 320 34.7
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 2.3e-35 153.7 306 33.0
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 4.0e-35 152.9 307 34.9
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 5.2e-35 152.5 306 35.3
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 5.2e-35 152.5 306 34.3
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 5.2e-35 152.5 307 36.2
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 5.2e-35 152.5 306 32.4
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 6.8e-35 152.1 308 35.4
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 6.8e-35 152.1 306 33.0
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 6.8e-35 152.1 306 32.4
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 8.9e-35 151.8 309 33.7
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 1.5e-34 151.0 307 34.5
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 2.0e-34 150.6 306 34.3
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 2.6e-34 150.2 316 34.5
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 5.7e-34 149.1 309 34.3
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 9.8e-34 148.3 171 46.8
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 9.8e-34 148.3 306 32.7
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 1.7e-33 147.5 320 33.4
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.7e-33 147.5 321 33.3
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 3.7e-33 146.4 171 45.6
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.7e-33 146.4 171 47.4
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 3.7e-33 146.4 171 45.0
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 4.9e-33 146.0 303 32.3
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 6.3e-33 145.6 171 46.8
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 1.4e-32 144.4 259 36.3
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 1.8e-32 144.1 306 32.4
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 2.4e-32 143.7 168 44.6
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 5.4e-32 142.5 345 31.3
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 7.0e-32 142.1 300 32.7
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 7.0e-32 142.1 171 45.6
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 2.0e-31 140.6 306 32.4
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 2.7e-31 140.2 283 32.5
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 2.7e-31 140.2 230 39.1
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.9e-31 139.0 349 31.2
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 1.3e-30 137.9 292 34.6
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 2.9e-30 136.7 296 33.4
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.1e-29 134.8 316 32.0
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 9.5e-29 131.7 305 31.1
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 1.2e-28 131.3 303 32.0
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 2.8e-28 130.2 152 46.7
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 4.7e-28 129.4 308 33.4
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 1.8e-27 127.5 286 34.6
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 4.0e-27 126.3 264 32.2
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 2.0e-26 124.0 311 33.4
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 3.4e-26 123.2 344 28.5
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.5e-26 122.1 327 30.6
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 2.9e-25 120.2 146 43.2
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 4.9e-25 119.4 348 30.2
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 2.7e-23 113.6 220 33.2
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.6e-22 108.6 321 29.0
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.1e-21 108.2 380 26.8
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 2.5e-21 107.1 247 34.4
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 8.0e-20 102.1 129 44.2
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 2.9e-17 93.6 202 32.7
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 3.7e-17 93.2 116 43.1
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 6.0e-15 85.9 171 32.2
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.5e-13 81.3 202 32.2
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 1.5e-13 81.3 107 39.3
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.5e-13 81.3 187 31.0
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 5.6e-13 79.3 119 41.2
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 5.2e-11 72.8 100 44.0
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 4.9e-09 66.2 61 47.5
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 3.2e-08 63.5 52 55.8
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.2e-07 61.6 177 28.2
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 7.8e-07 58.9 100 35.0
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 1.3e-06 58.2 165 27.9
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.7e-06 57.8 66 39.4
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 8.6e-06 55.5 173 28.3


User provided reference genes

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