Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G776 Micromonas commoda HOM05D000717 ORTHO05D000555 0.0e+00 1375.5 745 100.0
Pp3c14_19010 Physcomitrium patens HOM05D000717 ORTHO05D000555 5.3e-25 120.6 590 24.7
Pp3c15_7540 Physcomitrium patens HOM05D000717 ORTHO05D000555 2.9e-23 114.8 597 24.0
AagrBONN_evm.TU.Sc2ySwM_228.2822 Anthoceros agrestis HOM05D000717 ORTHO05D000555 2.1e-21 108.6 593 23.1
Mapoly0015s0160 Marchantia polymorpha HOM05D000717 ORTHO05D000555 4.6e-21 107.5 600 23.8
CBR_g45182 Chara braunii HOM05D001882 ORTHO05D002314 1.8e-20 105.5 729 23.0
Cre06.g264450 Chlamydomonas reinhardtii HOM05D000717 ORTHO05D000555 2.2e-18 98.6 587 24.5
PRCOL_00005351 Prasinoderma coloniale HOM05D000717 ORTHO05D000555 2.4e-17 95.1 607 25.9
Mapoly0026s0132 Marchantia polymorpha HOM05D000717 ORTHO05D000555 4.1e-17 94.4 529 21.6
CBR_g45183 Chara braunii HOM05D000717 ORTHO05D000555 4.5e-16 90.9 672 22.3
PRCOL_00005027 Prasinoderma coloniale HOM05D000717 ORTHO05D000555 6.3e-10 70.5 178 29.2
Glyma.13G051100 Glycine max HOM05D000717 ORTHO05D000555 1.8e-09 68.9 270 28.5
VMungo0464G0534 Vigna mungo HOM05D000717 ORTHO05D000555 6.9e-09 67.0 266 28.9
Glyma.19G037500 Glycine max HOM05D000717 ORTHO05D000555 9.1e-09 66.6 265 28.7
Pp3c10_3550 Physcomitrium patens HOM05D000717 ORTHO05D000555 1.2e-08 66.2 262 28.2
TPR.G15951 Trifolium pratense HOM05D000717 ORTHO05D000555 2.0e-08 65.5 267 28.1
Phvul.004G045100 Phaseolus vulgaris HOM05D000717 ORTHO05D000555 4.5e-08 64.3 266 27.8
Psat1g064360 Pisum sativum HOM05D000717 ORTHO05D000555 4.5e-08 64.3 265 25.7
ATR0681G193 Amborella trichopoda HOM05D000717 ORTHO05D000555 5.9e-08 63.9 187 28.3
Os06g0275800 Oryza sativa ssp. japonica HOM05D000717 ORTHO05D000555 5.9e-08 63.9 258 24.4
Glyma.14G090200 Glycine max HOM05D000717 ORTHO05D000555 1.3e-07 62.8 266 25.6
PRCOL_00000710 Prasinoderma coloniale HOM05D000717 ORTHO05D000555 1.3e-07 62.8 268 27.6
arahy.Tifrunner.gnm1.ann1.RCMT0A Arachis hypogaea HOM05D000717 ORTHO05D000555 1.7e-07 62.4 272 25.0
Cfa022042 Carpinus fangiana HOM05D000717 ORTHO05D000555 1.7e-07 62.4 268 24.6
Mapoly0118s0030 Marchantia polymorpha HOM05D000717 ORTHO05D000555 1.7e-07 62.4 275 26.5
Medtr6g016270 Medicago truncatula HOM05D000717 ORTHO05D000555 1.7e-07 62.4 266 28.2
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 2.9e-07 61.6 266 28.6
Dinv21808 Davidia involucrata HOM05D000717 ORTHO05D000555 2.9e-07 61.6 190 27.4
HanXRQChr08g0226361 Helianthus annuus HOM05D000717 ORTHO05D000555 2.9e-07 61.6 270 25.6
arahy.Tifrunner.gnm1.ann1.AZC10Q Arachis hypogaea HOM05D000717 ORTHO05D000555 3.8e-07 61.2 266 28.6
Cre02.g115300 Chlamydomonas reinhardtii HOM05D000717 ORTHO05D044291 3.8e-07 61.2 254 27.2
Lalb_Chr17g0336751 Lupinus albus HOM05D000717 ORTHO05D000555 3.8e-07 61.2 183 29.5
Medtr6g016245 Medicago truncatula HOM05D000717 ORTHO05D000555 3.8e-07 61.2 265 26.4
Os02g0727100 Oryza sativa ssp. japonica HOM05D000717 ORTHO05D000555 3.8e-07 61.2 267 26.6
Zm00001eb380520 Zea mays HOM05D000717 ORTHO05D000555 3.8e-07 61.2 183 26.2
arahy.Tifrunner.gnm1.ann1.AP0NEP Arachis hypogaea HOM05D000717 ORTHO05D000555 6.5e-07 60.5 272 25.0
arahy.Tifrunner.gnm1.ann1.IJ3G4E Arachis hypogaea HOM05D000717 ORTHO05D000555 6.5e-07 60.5 272 25.0
Lj1g0023713 Lotus japonicus HOM05D000717 ORTHO05D000555 6.5e-07 60.5 269 27.1
Pp3c18_17440 Physcomitrium patens HOM05D000717 ORTHO05D000555 6.5e-07 60.5 179 31.8
arahy.Tifrunner.gnm1.ann1.5Q7SRA Arachis hypogaea HOM05D000717 ORTHO05D000555 8.5e-07 60.1 269 26.0
Lalb_Chr10g0092541 Lupinus albus HOM05D000717 ORTHO05D000555 8.5e-07 60.1 182 29.7
Glyma.06G222400 Glycine max HOM05D000717 ORTHO05D000555 1.1e-06 59.7 271 25.8
Medtr6g016275 Medicago truncatula HOM05D000717 ORTHO05D000555 1.1e-06 59.7 267 27.0
Phvul.009G198000 Phaseolus vulgaris HOM05D000717 ORTHO05D000555 1.1e-06 59.7 269 25.7
Psat1g064280 Pisum sativum HOM05D000717 ORTHO05D000555 1.1e-06 59.7 265 26.0
TPR.G15958 Trifolium pratense HOM05D000717 ORTHO05D000555 1.1e-06 59.7 265 25.3
C06p18410 Brassica napus HOM05D000717 ORTHO05D000555 1.4e-06 59.3 260 28.8
Ca_20755_v3 Cicer arietinum L. HOM05D000717 ORTHO05D000555 1.4e-06 59.3 265 26.4
Lj2g0018667 Lotus japonicus HOM05D000717 ORTHO05D000555 1.4e-06 59.3 266 26.7
Lalb_Chr10g0092571 Lupinus albus HOM05D000717 ORTHO05D000555 1.4e-06 59.3 265 26.8
Medtr6g016295 Medicago truncatula HOM05D000717 ORTHO05D000555 1.9e-06 58.9 267 27.0
TAR633G2628 Trochodendron aralioides HOM05D000717 ORTHO05D000555 1.9e-06 58.9 274 27.7
arahy.Tifrunner.gnm1.ann1.345BN3 Arachis hypogaea HOM05D000717 ORTHO05D000555 2.5e-06 58.5 269 26.4
Lj6A773T126 Lonicera japonica HOM05D000717 ORTHO05D000555 2.5e-06 58.5 269 26.0
PRCOL_00005303 Prasinoderma coloniale HOM05D000717 ORTHO05D000555 2.5e-06 58.5 301 26.6
SMO367G1032 Selaginella moellendorffii HOM05D000717 ORTHO05D000555 2.5e-06 58.5 259 25.5
BcaC08g44404 Brassica carinata HOM05D000717 ORTHO05D000555 3.2e-06 58.2 257 29.2
A07p19830 Brassica napus HOM05D000717 ORTHO05D000555 3.2e-06 58.2 267 27.3
BolC6t37053H Brassica oleracea HOM05D000717 ORTHO05D000555 3.2e-06 58.2 257 29.2
BraA07t29687Z Brassica rapa HOM05D000717 ORTHO05D000555 3.2e-06 58.2 267 27.3
Cpa.g.sc19.102 Carica papaya HOM05D000717 ORTHO05D000555 3.2e-06 58.2 182 26.4
Psat1g064440 Pisum sativum HOM05D000717 ORTHO05D000555 3.2e-06 58.2 265 25.7
Psat1g064480 Pisum sativum HOM05D000717 ORTHO05D000555 3.2e-06 58.2 278 26.3
Sed0026484 Sechium edule HOM05D000717 ORTHO05D000555 3.2e-06 58.2 273 25.6
TPR.G13183 Trifolium pratense HOM05D000717 ORTHO05D000555 3.2e-06 58.2 265 26.0
VMungo0464G1796 Vigna mungo HOM05D000717 ORTHO05D000555 3.2e-06 58.2 181 28.7
AUR62022974 Chenopodium quinoa HOM05D000717 ORTHO05D000555 4.2e-06 57.8 284 25.7
Gohir.D06G023900 Gossypium hirsutum HOM05D000717 ORTHO05D000555 4.2e-06 57.8 266 23.3
Gorai.010G028400 Gossypium raimondii HOM05D000717 ORTHO05D000555 4.2e-06 57.8 266 23.3
unitig_736.g22263 Utricularia gibba HOM05D000717 ORTHO05D000555 4.2e-06 57.8 267 27.3
ATR0691G087 Amborella trichopoda HOM05D000717 ORTHO05D000555 5.5e-06 57.4 264 25.8
AagrBONN_evm.TU.Sc2ySwM_228.2419 Anthoceros agrestis HOM05D000717 ORTHO05D000555 5.5e-06 57.4 172 29.1
Dinv10559 Davidia involucrata HOM05D000717 ORTHO05D000555 5.5e-06 57.4 191 29.3
Glyma.19G037400 Glycine max HOM05D000717 ORTHO05D000555 5.5e-06 57.4 270 25.6
Lj1C963T4 Lonicera japonica HOM05D000717 ORTHO05D000555 5.5e-06 57.4 176 26.7
BcaB01g00018 Brassica carinata HOM05D000717 ORTHO05D000555 7.2e-06 57.0 271 26.2
Glyma.08G254200 Glycine max HOM05D000717 ORTHO05D000555 7.2e-06 57.0 180 26.7
Lalb_Chr21g0318131 Lupinus albus HOM05D000717 ORTHO05D000555 7.2e-06 57.0 270 25.9
Sed0026102 Sechium edule HOM05D000717 ORTHO05D000555 7.2e-06 57.0 274 25.5
AUR62012332 Chenopodium quinoa HOM05D000717 ORTHO05D000555 9.4e-06 56.6 284 26.1
Ca_06963_v3 Cicer arietinum L. HOM05D000717 ORTHO05D000555 9.4e-06 56.6 266 25.9
Lj4g0026525 Lotus japonicus HOM05D000717 ORTHO05D000555 9.4e-06 56.6 265 25.7
Lalb_Chr04g0258301 Lupinus albus HOM05D000717 ORTHO05D000555 9.4e-06 56.6 266 25.9


User provided reference genes

Program Settings