Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G711 Micromonas commoda HOM05D000756 ORTHO05D270173 5.9e-123 444.1 212 100.0
Medtr8g105630 Medicago truncatula HOM05D000756 ORTHO05D000604 2.0e-09 67.0 195 26.7
ECA240G1785 Erigeron canadensis HOM05D000756 ORTHO05D000604 3.4e-09 66.2 186 28.5
FvH4_2g23900 Fragaria vesca HOM05D000756 ORTHO05D000604 9.8e-09 64.7 173 28.3
MBI18_g19076_MAGBIO Magnolia biondii HOM05D000756 ORTHO05D000604 2.2e-08 63.5 198 28.3
Cfa012167 Carpinus fangiana HOM05D000756 ORTHO05D000604 2.9e-08 63.2 205 26.8
CiPaw.11G136400 Carya illinoinensis HOM05D000756 ORTHO05D000604 2.9e-08 63.2 201 26.4
Cfa026263 Carpinus fangiana HOM05D000756 ORTHO05D000604 3.7e-08 62.8 211 28.4
RcHm_v2.0_Chr6g0291511 Rosa chinensis HOM05D000756 ORTHO05D000604 3.7e-08 62.8 173 27.7
Zm00001eb016270 Zea mays HOM05D000756 ORTHO05D000604 3.7e-08 62.8 197 26.4
Psat7g032560 Pisum sativum HOM05D000756 ORTHO05D000604 4.9e-08 62.4 173 28.9
Gohir.D12G230200 Gossypium hirsutum HOM05D000756 ORTHO05D000604 6.4e-08 62.0 227 26.0
Cre08.g358525 Chlamydomonas reinhardtii HOM05D000756 ORTHO05D000604 8.3e-08 61.6 90 35.6
COL.COLO4_34451 Corchorus olitorius HOM05D000756 ORTHO05D000604 1.1e-07 61.2 201 25.4
HanXRQChr03g0086581 Helianthus annuus HOM05D000756 ORTHO05D000604 1.1e-07 61.2 186 27.4
Ciclev10022130m.g Citrus clementina HOM05D000756 ORTHO05D000604 1.4e-07 60.8 194 27.3
Gohir.A12G227700 Gossypium hirsutum HOM05D000756 ORTHO05D000604 1.4e-07 60.8 218 26.1
Lj8A232T67 Lonicera japonica HOM05D000756 ORTHO05D000604 1.4e-07 60.8 173 27.2
MBI18_g40942_MAGBIO Magnolia biondii HOM05D000756 ORTHO05D000604 1.8e-07 60.5 173 27.2
Sc01g0009510 Simmondsia chinensis HOM05D000756 ORTHO05D000604 1.8e-07 60.5 178 27.0
CSS0023923 Camellia sinensis var. sinensis HOM05D000756 ORTHO05D000604 2.4e-07 60.1 173 26.6
CSS0030694 Camellia sinensis var. sinensis HOM05D000756 ORTHO05D000604 2.4e-07 60.1 173 26.6
CDE06G0247 Ceratophyllum demersum HOM05D000756 ORTHO05D000604 2.4e-07 60.1 210 25.2
FAN20G2856 Fragaria x ananassa HOM05D000756 ORTHO05D000604 2.4e-07 60.1 158 27.8
VMungo1215G2414 Vigna mungo HOM05D000756 ORTHO05D000604 2.4e-07 60.1 194 27.3
DCAR_000608 Daucus carota HOM05D000756 ORTHO05D000604 3.2e-07 59.7 145 29.0
ECA233G1555 Erigeron canadensis HOM05D000474 ORTHO05D006736 3.2e-07 59.7 173 26.6
AUR62017225 Chenopodium quinoa HOM05D000756 ORTHO05D000604 7.0e-07 58.5 173 25.4
Manes.02G022520 Manihot esculenta HOM05D000756 ORTHO05D000604 7.0e-07 58.5 173 26.6
AUR62010584 Chenopodium quinoa HOM05D000756 ORTHO05D000604 9.2e-07 58.2 197 25.4
Duzib138G1050 Durio zibethinus HOM05D001820 ORTHO05D001794 9.2e-07 58.2 179 27.4
MCO09G450 Micromonas commoda HOM05D000756 ORTHO05D000604 1.2e-06 57.8 105 34.3
Zm00001eb186820 Zea mays HOM05D000756 ORTHO05D000604 1.2e-06 57.8 187 27.3
PRCOL_00000776 Prasinoderma coloniale HOM05D000756 ORTHO05D000604 1.6e-06 57.4 90 38.9
CDE11G0091 Ceratophyllum demersum HOM05D000756 ORTHO05D000604 2.0e-06 57.0 193 26.4
AL4G47740 Arabidopsis lyrata HOM05D000756 ORTHO05D000604 2.7e-06 56.6 175 23.4
Nn1g01907 Nelumbo nucifera HOM05D000756 ORTHO05D000604 2.7e-06 56.6 215 24.7
Nitab4.5_0007001g0040 Nicotiana tabacum HOM05D000756 ORTHO05D000604 2.7e-06 56.6 158 27.8
PRCOL_00001164 Prasinoderma coloniale HOM05D000756 ORTHO05D000604 2.7e-06 56.6 169 23.7
SMO203G0249 Selaginella moellendorffii HOM05D000756 ORTHO05D000604 2.7e-06 56.6 212 27.4
AT2G48150 Arabidopsis thaliana HOM05D000756 ORTHO05D000604 3.5e-06 56.2 175 22.9
Aa31LG5G5360 Aethionema arabicum HOM05D000756 ORTHO05D000604 4.6e-06 55.8 156 26.9
CBR_g871 Chara braunii HOM05D000756 ORTHO05D000604 4.6e-06 55.8 223 24.2
Aqoxy2G03256 Aquilegia oxysepala HOM05D000756 ORTHO05D000604 5.9e-06 55.5 220 24.1
THA.LOC104800901 Tarenaya hassleriana HOM05D000756 ORTHO05D000604 5.9e-06 55.5 174 27.6
Os06g0185900 Oryza sativa ssp. japonica HOM05D000756 ORTHO05D000604 7.8e-06 55.1 219 27.4


User provided reference genes

Program Settings