Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 2.8e-138 495.4 267 100.0
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 1.2e-51 207.6 183 56.3
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 1.1e-46 191.0 182 51.1
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 3.3e-46 189.5 209 47.4
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 2.2e-45 186.8 181 51.4
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 2.8e-45 186.4 181 51.4
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 2.4e-44 183.3 220 46.4
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 9.0e-44 181.4 220 47.3
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 1.2e-43 181.0 192 49.5
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 1.5e-43 180.6 181 48.6
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 1.5e-43 180.6 183 52.5
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 2.0e-43 180.3 182 50.5
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 2.0e-43 180.3 182 51.6
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 3.4e-43 179.5 185 50.8
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 4.5e-43 179.1 182 50.5
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 1.7e-42 177.2 183 49.2
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 1.7e-42 177.2 180 48.3
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 1.7e-42 177.2 183 48.1
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 2.2e-42 176.8 180 49.4
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 2.9e-42 176.4 181 50.3
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 3.8e-42 176.0 181 49.7
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 5.0e-42 175.6 183 48.6
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 6.5e-42 175.3 183 49.2
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 8.5e-42 174.9 181 49.7
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 8.5e-42 174.9 199 47.2
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 1.1e-41 174.5 187 47.6
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 1.1e-41 174.5 182 48.4
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 1.1e-41 174.5 181 49.7
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 1.4e-41 174.1 181 49.7
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 2.5e-41 173.3 181 49.2
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.5e-41 173.3 180 48.9
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 2.5e-41 173.3 181 49.2
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 2.5e-41 173.3 181 49.2
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 2.5e-41 173.3 183 48.6
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 2.5e-41 173.3 183 48.1
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 3.2e-41 172.9 182 48.9
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 3.2e-41 172.9 183 50.3
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 4.2e-41 172.6 183 50.3
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 4.2e-41 172.6 181 48.6
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 4.2e-41 172.6 181 49.2
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 7.2e-41 171.8 181 49.2
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 7.2e-41 171.8 181 47.5
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 9.4e-41 171.4 183 48.6
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 9.4e-41 171.4 200 47.0
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 1.2e-40 171.0 182 47.8
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 1.2e-40 171.0 182 48.9
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 1.6e-40 170.6 181 49.2
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 1.6e-40 170.6 181 48.1
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 2.7e-40 169.9 203 45.8
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 2.7e-40 169.9 183 48.1
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 2.7e-40 169.9 180 46.7
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 2.7e-40 169.9 182 47.3
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 3.6e-40 169.5 183 48.1
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 3.6e-40 169.5 183 48.1
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 3.6e-40 169.5 183 48.1
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 3.6e-40 169.5 182 47.3
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 4.6e-40 169.1 192 46.4
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 4.6e-40 169.1 183 48.1
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 4.6e-40 169.1 180 47.2
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 6.1e-40 168.7 183 48.6
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 6.1e-40 168.7 180 47.2
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 6.1e-40 168.7 182 47.3
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 7.9e-40 168.3 181 48.6
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 1.0e-39 167.9 183 48.1
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 1.4e-39 167.5 194 45.9
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 2.3e-39 166.8 197 44.7
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 3.0e-39 166.4 192 45.8
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 3.0e-39 166.4 168 47.6
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 5.1e-39 165.6 183 47.5
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 5.1e-39 165.6 183 47.0
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 5.1e-39 165.6 180 43.9
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 5.1e-39 165.6 182 47.3
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 6.7e-39 165.2 174 48.9
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 2.5e-38 163.3 178 46.6
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 3.3e-38 162.9 183 47.0
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 3.3e-38 162.9 182 45.6
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 7.4e-38 161.8 180 43.9
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 2.8e-37 159.8 171 48.0
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 2.8e-37 159.8 175 46.3
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 3.7e-37 159.5 186 47.3
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 8.2e-37 158.3 174 48.3
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 1.1e-36 157.9 200 42.5
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 1.3e-34 151.0 216 42.1
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 2.9e-34 149.8 180 44.4
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 6.5e-34 148.7 181 44.2
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 8.5e-34 148.3 148 49.3
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 1.1e-33 147.9 180 46.1
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 3.2e-33 146.4 181 44.8
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 5.5e-33 145.6 181 41.4
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 5.5e-33 145.6 165 47.3
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 1.2e-32 144.4 183 44.3
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 2.1e-32 143.7 172 44.2
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 4.7e-32 142.5 184 42.9
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 6.1e-32 142.1 183 42.6
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 6.1e-32 142.1 175 44.6
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 5.1e-31 139.0 179 47.5
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 2.6e-30 136.7 141 49.6
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 1.3e-29 134.4 182 40.7
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 3.7e-29 132.9 108 55.6
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 1.1e-28 131.3 108 55.6
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 2.4e-28 130.2 164 43.9
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 4.1e-28 129.4 183 42.6
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 5.3e-28 129.0 108 53.7
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 7.0e-28 128.6 117 51.3
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.7e-26 124.0 171 42.1
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 2.9e-26 123.2 202 36.6
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 4.7e-24 115.9 132 45.5
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 6.7e-23 112.1 88 56.8
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 3.7e-21 106.3 132 46.2
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 9.1e-20 101.7 125 41.6
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.3e-18 97.8 83 51.8
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 4.2e-17 92.8 143 39.2
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.2e-16 91.3 76 52.6
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 8.3e-13 78.6 174 37.4
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 5.4e-12 75.9 84 48.8
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 1.6e-11 74.3 136 29.4
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 2.7e-11 73.6 64 54.7
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 2.7e-08 63.5 118 35.6
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 3.0e-07 60.1 93 39.8


User provided reference genes

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