Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G622 Micromonas commoda HOM05D004023 ORTHO05D004681 2.5e-206 721.8 360 100.0
SMO200G0269 Selaginella moellendorffii HOM05D004023 ORTHO05D004681 1.7e-16 91.3 187 33.2
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 7.7e-14 82.4 176 34.7
Os03g0177000 Oryza sativa ssp. japonica HOM05D004023 ORTHO05D004681 4.2e-12 76.6 238 31.1
Pp3c12_9920 Physcomitrium patens HOM05D004023 ORTHO05D004681 9.4e-12 75.5 171 33.3
GSVIVG01037415001 Vitis vinifera HOM05D004023 ORTHO05D004681 2.1e-11 74.3 181 32.6
MBI13_g41748_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 1.4e-10 71.6 176 30.7
Cc01_g06740 Coffea canephora HOM05D004023 ORTHO05D004681 2.3e-10 70.9 177 31.1
PSO384G4677 Papaver somniferum HOM05D004023 ORTHO05D004681 8.8e-10 68.9 176 32.4
TAR383G0448 Trochodendron aralioides HOM05D004023 ORTHO05D004681 1.2e-09 68.6 176 31.2
HanXRQChr09g0237831 Helianthus annuus HOM05D004023 ORTHO05D004681 1.5e-09 68.2 175 29.7
Hund12723 Selenicereus undatus HOM05D004023 ORTHO05D004681 1.5e-09 68.2 179 30.7
Eucgr.J00649 Eucalyptus grandis HOM05D004023 ORTHO05D004681 2.0e-09 67.8 177 33.3
Zm00001eb401920 Zea mays HOM05D004023 ORTHO05D004681 2.0e-09 67.8 174 32.8
AUR62028938 Chenopodium quinoa HOM05D004023 ORTHO05D004681 2.6e-09 67.4 200 30.0
Aqoxy7G01044 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 3.4e-09 67.0 193 29.5
MSTRG.18474 Avicennia marina HOM05D004023 ORTHO05D004681 4.4e-09 66.6 201 29.4
AUR62025247 Chenopodium quinoa HOM05D004023 ORTHO05D004681 4.4e-09 66.6 240 27.9
ATR1096G005 Amborella trichopoda HOM05D004023 ORTHO05D004681 5.7e-09 66.2 180 29.4
Rhsim13G0202100 Rhododendron simsii HOM05D004023 ORTHO05D004681 7.5e-09 65.9 175 30.9
CAN.G484.8 Capsicum annuum HOM05D004023 ORTHO05D004681 1.7e-08 64.7 179 29.1
TAR369G0443 Trochodendron aralioides HOM05D004023 ORTHO05D004681 1.7e-08 64.7 176 31.8
vmacro04098 Vaccinium macrocarpon HOM05D004023 ORTHO05D004681 2.2e-08 64.3 175 30.3
Hma1.2p1_1711F.1_g298750 Hydrangea macrophylla HOM05D004023 ORTHO05D004681 2.8e-08 63.9 177 31.1
DCAR_006328 Daucus carota HOM05D004023 ORTHO05D004681 4.8e-08 63.2 177 29.9
Migut.D00690 Erythranthe guttata HOM05D004023 ORTHO05D004681 8.3e-08 62.4 177 31.6
Aqoxy1G00042 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 1.1e-07 62.0 176 29.0
TWI63G1612 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 1.4e-07 61.6 174 31.6
SalBow6G0174 Salvia bowleyana HOM05D005733 ORTHO05D007442 5.4e-07 59.7 210 29.0
unitig_0.g313 Utricularia gibba HOM05D004023 ORTHO05D004681 5.4e-07 59.7 198 27.3
PGR119G0815 Punica granatum HOM05D004023 ORTHO05D004681 9.1e-07 58.9 177 28.2
Cre14.g614750 Chlamydomonas reinhardtii HOM05D005733 ORTHO05D004681 1.2e-06 58.5 169 30.8
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.6e-06 58.2 168 29.2
Carub.0007s1276 Capsella rubella HOM05D005733 ORTHO05D007442 2.0e-06 57.8 158 32.3
Ca_21184_v3 Cicer arietinum L. HOM05D005733 ORTHO05D007442 2.0e-06 57.8 203 29.6
Migut.J01418 Erythranthe guttata HOM05D005733 ORTHO05D007442 2.7e-06 57.4 224 28.1
Actinidia24483 Actinidia chinensis HOM05D004023 ORTHO05D004681 3.5e-06 57.0 177 29.9
DCAR_014719 Daucus carota HOM05D005733 ORTHO05D007442 3.5e-06 57.0 197 31.5
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 5.9e-06 56.2 87 36.8
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 7.7e-06 55.8 168 31.0


User provided reference genes

Program Settings