Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G548 Micromonas commoda HOM05D005379 ORTHO05D006661 3.4e-118 428.3 214 100.0
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 1.5e-33 147.1 183 41.5
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 1.7e-32 143.7 189 38.6
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 2.2e-32 143.3 189 37.0
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 2.9e-32 142.9 189 38.6
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 3.7e-32 142.5 189 38.1
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 4.9e-32 142.1 189 38.1
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 6.4e-32 141.7 185 39.5
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 6.4e-32 141.7 189 36.5
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 1.4e-31 140.6 189 36.0
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 1.9e-31 140.2 185 41.1
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 2.4e-31 139.8 189 38.6
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 4.1e-31 139.0 194 36.6
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 7.0e-31 138.3 186 38.7
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 9.2e-31 137.9 189 34.9
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 1.2e-30 137.5 189 35.4
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 1.6e-30 137.1 171 42.7
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 2.0e-30 136.7 183 39.3
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 2.7e-30 136.3 189 37.6
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 2.7e-30 136.3 191 37.2
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 3.5e-30 136.0 189 37.0
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 3.5e-30 136.0 189 37.0
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 1.3e-29 134.0 188 34.6
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 1.3e-29 134.0 198 36.4
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 1.3e-29 134.0 189 37.0
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 1.7e-29 133.7 192 36.5
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 2.3e-29 133.3 191 36.6
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 2.3e-29 133.3 192 37.0
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 2.3e-29 133.3 189 36.5
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 3.0e-29 132.9 185 37.3
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 3.0e-29 132.9 189 33.9
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 3.9e-29 132.5 186 36.6
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 3.9e-29 132.5 189 34.9
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 5.0e-29 132.1 189 36.0
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 5.0e-29 132.1 189 36.5
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 6.6e-29 131.7 188 34.0
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 6.6e-29 131.7 184 34.8
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 6.6e-29 131.7 181 37.0
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 8.6e-29 131.3 189 35.4
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 1.5e-28 130.6 183 37.2
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 1.9e-28 130.2 188 34.0
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 2.5e-28 129.8 185 36.8
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 2.5e-28 129.8 188 34.6
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 3.3e-28 129.4 189 36.5
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 3.3e-28 129.4 185 37.3
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 3.3e-28 129.4 191 35.1
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 3.3e-28 129.4 187 38.0
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 4.3e-28 129.0 186 35.5
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 5.6e-28 128.6 187 37.4
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 5.6e-28 128.6 188 33.0
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 5.6e-28 128.6 188 35.6
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 7.3e-28 128.3 186 33.9
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 7.3e-28 128.3 185 36.2
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 7.3e-28 128.3 177 37.3
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 7.3e-28 128.3 188 34.0
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 9.5e-28 127.9 186 33.9
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 9.5e-28 127.9 187 35.8
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 9.5e-28 127.9 188 34.0
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 9.5e-28 127.9 189 34.9
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 9.5e-28 127.9 187 35.8
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 1.2e-27 127.5 186 33.9
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 1.2e-27 127.5 184 33.7
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 1.6e-27 127.1 189 36.5
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 1.6e-27 127.1 201 36.3
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 2.1e-27 126.7 185 34.6
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 2.8e-27 126.3 179 35.8
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 3.6e-27 125.9 182 36.3
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 3.6e-27 125.9 179 35.8
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 4.7e-27 125.6 178 38.8
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 6.2e-27 125.2 174 37.9
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 6.2e-27 125.2 189 34.4
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 1.1e-26 124.4 190 34.2
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 1.1e-26 124.4 189 33.3
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 1.1e-26 124.4 181 34.3
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 1.4e-26 124.0 188 33.0
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 1.8e-26 123.6 185 33.5
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 2.3e-26 123.2 186 32.8
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 6.8e-26 121.7 180 33.9
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 8.9e-26 121.3 180 33.3
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 1.2e-25 120.9 190 33.2
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.5e-25 120.6 178 35.4
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 2.6e-25 119.8 186 32.3
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 2.6e-25 119.8 199 32.2
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 7.5e-25 118.2 167 36.5
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 7.5e-25 118.2 174 36.2
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 1.3e-24 117.5 154 36.4
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 4.9e-24 115.5 164 35.4
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 6.4e-24 115.2 164 35.4
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 7.1e-23 111.7 169 33.7
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 9.2e-23 111.3 143 37.8
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 2.1e-22 110.2 143 38.5
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 2.1e-22 110.2 143 38.5
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 2.1e-22 110.2 228 30.3
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 2.7e-22 109.8 145 36.6
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 1.3e-21 107.5 143 37.1
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 1.3e-21 107.5 143 37.1
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 1.7e-21 107.1 143 36.4
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.3e-21 106.7 143 36.4
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.3e-21 106.7 182 31.3
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 8.6e-21 104.8 156 34.6
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 1.1e-20 104.4 156 32.7
Cre01.g052050 Chlamydomonas reinhardtii HOM05D005379 ORTHO05D006661 1.5e-20 104.0 179 34.6
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.5e-20 104.0 135 40.0
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.9e-20 103.6 156 34.0
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.9e-20 103.6 141 36.9
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.9e-20 103.6 141 36.9
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 2.5e-20 103.2 155 32.9
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.3e-20 102.8 156 34.6
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 3.3e-20 102.8 157 36.3
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 7.3e-20 101.7 143 35.0
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 7.3e-20 101.7 178 30.9
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 8.1e-19 98.2 120 37.5
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 8.1e-19 98.2 121 36.4
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 1.1e-18 97.8 121 35.5
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 2.3e-18 96.7 113 38.9
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 2.3e-18 96.7 145 31.7
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 6.8e-18 95.1 149 33.6
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 7.6e-17 91.7 133 34.6
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 9.9e-17 91.3 102 41.2
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 1.7e-16 90.5 243 27.2
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 2.7e-14 83.2 155 32.3
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 2.3e-13 80.1 205 25.4
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 5.2e-10 68.9 89 36.0
BraA02t06308Z Brassica rapa HOM05D005379 ORTHO05D006661 4.6e-06 55.8 80 38.8
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 6.0e-06 55.5 80 37.5


User provided reference genes

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