Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 2.4e-72 275.4 141 100.0
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 3.3e-21 105.5 98 54.1
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 2.8e-20 102.4 104 48.1
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 4.8e-20 101.7 140 43.6
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 4.1e-19 98.6 129 48.8
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 4.1e-19 98.6 139 42.4
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.5e-18 96.7 95 49.5
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 4.5e-18 95.1 111 48.6
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 4.5e-18 95.1 127 44.9
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 4.5e-18 95.1 98 48.0
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 1.0e-17 94.0 116 48.3
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 1.0e-17 94.0 113 47.8
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.3e-17 93.6 121 45.5
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.3e-17 93.6 89 53.9
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.3e-17 93.6 89 53.9
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 1.3e-17 93.6 125 44.8
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 1.7e-17 93.2 111 46.8
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.7e-17 93.2 89 53.9
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 2.2e-17 92.8 86 57.0
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.9e-17 92.4 120 45.0
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.9e-17 92.4 120 45.0
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.8e-17 92.0 94 51.1
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 5.0e-17 91.7 101 49.5
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 5.0e-17 91.7 125 44.0
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 5.0e-17 91.7 87 56.3
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 5.0e-17 91.7 86 53.5
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 5.0e-17 91.7 86 54.7
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 5.0e-17 91.7 102 50.0
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 5.0e-17 91.7 86 54.7
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 6.5e-17 91.3 106 48.1
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 53.5
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 54.7
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 55.8
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 54.7
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 54.7
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 54.7
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 54.7
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 54.7
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 54.7
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 6.5e-17 91.3 86 54.7
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 8.5e-17 90.9 101 49.5
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 8.5e-17 90.9 94 50.0
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 8.5e-17 90.9 101 49.5
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 8.5e-17 90.9 86 54.7
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 8.5e-17 90.9 86 54.7
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 8.5e-17 90.9 86 53.5
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 8.5e-17 90.9 143 43.4
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.1e-16 90.5 86 53.5
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 1.1e-16 90.5 129 44.2
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 1.1e-16 90.5 128 43.0
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 1.1e-16 90.5 99 50.5
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 1.1e-16 90.5 86 53.5
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.4e-16 90.1 86 53.5
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.4e-16 90.1 117 43.6
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.4e-16 90.1 87 55.2
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 1.4e-16 90.1 127 43.3
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 1.4e-16 90.1 99 50.5
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.9e-16 89.7 99 51.5
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 1.9e-16 89.7 101 50.5
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 1.9e-16 89.7 101 50.5
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.9e-16 89.7 101 50.5
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 1.9e-16 89.7 101 50.5
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 1.9e-16 89.7 101 50.5
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.9e-16 89.7 101 50.5
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 2.5e-16 89.4 102 50.0
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 2.5e-16 89.4 102 50.0
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 2.5e-16 89.4 126 46.0
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 2.5e-16 89.4 86 53.5
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.5e-16 89.4 86 52.3
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 3.2e-16 89.0 89 52.8
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 3.2e-16 89.0 102 50.0
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 3.2e-16 89.0 120 45.8
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 3.2e-16 89.0 86 52.3
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 3.2e-16 89.0 100 50.0
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 3.2e-16 89.0 99 50.5
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 3.2e-16 89.0 125 45.6
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 3.2e-16 89.0 86 54.7
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 3.2e-16 89.0 86 54.7
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.2e-16 89.0 86 55.8
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 4.2e-16 88.6 86 54.7
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 4.2e-16 88.6 87 54.0
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 4.2e-16 88.6 107 48.6
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 4.2e-16 88.6 99 50.5
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 4.2e-16 88.6 100 50.0
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 4.2e-16 88.6 86 52.3
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 5.5e-16 88.2 101 49.5
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 5.5e-16 88.2 100 49.0
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 5.5e-16 88.2 86 54.7
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 5.5e-16 88.2 123 43.1
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 5.5e-16 88.2 86 54.7
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 7.2e-16 87.8 86 53.5
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 7.2e-16 87.8 86 54.7
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 7.2e-16 87.8 86 54.7
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 7.2e-16 87.8 86 54.7
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 7.2e-16 87.8 120 44.2
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 7.2e-16 87.8 86 54.7
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 9.4e-16 87.4 86 54.7
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 9.4e-16 87.4 86 53.5
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 9.4e-16 87.4 86 51.2
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 1.2e-15 87.0 86 53.5
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.2e-15 87.0 116 45.7
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 1.6e-15 86.7 99 47.5
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 2.1e-15 86.3 86 53.5
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.1e-15 86.3 104 48.1
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 3.6e-15 85.5 105 45.7
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 3.6e-15 85.5 112 44.6
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.7e-15 85.1 86 51.2
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 4.7e-15 85.1 124 43.5
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 6.1e-15 84.7 107 44.9
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 6.1e-15 84.7 124 42.7
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.8e-14 83.2 89 50.6
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 2.3e-14 82.8 86 51.2
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 5.2e-14 81.6 75 52.0
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 3.3e-13 79.0 72 55.6
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 1.8e-11 73.2 114 39.5
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 7.2e-08 61.2 64 48.4
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 6.1e-07 58.2 66 51.5


User provided reference genes

Program Settings