Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 2.3e-251 871.7 429 100.0
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 3.5e-53 213.4 385 36.9
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 4.5e-53 213.0 401 34.7
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 4.5e-53 213.0 370 36.5
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 5.9e-53 212.6 368 36.1
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 7.7e-53 212.2 407 34.4
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 7.7e-53 212.2 370 36.5
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 1.0e-52 211.8 400 35.0
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 2.9e-52 210.3 390 34.4
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.9e-52 210.3 371 36.4
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 2.9e-52 210.3 413 34.6
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 5.0e-52 209.5 388 35.3
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 6.5e-52 209.1 370 35.7
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 6.5e-52 209.1 386 36.5
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 8.5e-52 208.8 394 35.0
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 8.5e-52 208.8 401 35.2
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.1e-51 208.4 403 34.5
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 1.5e-51 208.0 281 43.1
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 1.5e-51 208.0 386 36.5
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 1.5e-51 208.0 391 34.0
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 1.9e-51 207.6 380 34.7
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.9e-51 207.6 407 35.4
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 1.9e-51 207.6 392 35.7
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 3.2e-51 206.8 383 35.0
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 5.5e-51 206.1 370 35.1
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 5.5e-51 206.1 368 36.4
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 5.5e-51 206.1 384 33.6
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 7.2e-51 205.7 370 36.2
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 7.2e-51 205.7 412 35.2
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 9.4e-51 205.3 391 35.3
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.2e-50 204.9 385 33.8
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.2e-50 204.9 374 35.8
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.6e-50 204.5 369 34.7
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 1.6e-50 204.5 369 35.2
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 2.7e-50 203.8 418 33.3
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 2.7e-50 203.8 421 32.3
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 2.7e-50 203.8 372 35.2
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 3.6e-50 203.4 425 33.9
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 4.7e-50 203.0 387 34.6
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 6.1e-50 202.6 383 33.9
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 6.1e-50 202.6 396 34.1
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 6.1e-50 202.6 371 35.6
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 6.1e-50 202.6 384 34.6
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.0e-49 201.8 388 35.8
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 1.4e-49 201.4 370 34.3
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 2.3e-49 200.7 382 34.3
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 2.3e-49 200.7 384 34.1
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 3.0e-49 200.3 385 34.0
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 3.0e-49 200.3 372 35.5
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 3.9e-49 199.9 378 33.6
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 3.9e-49 199.9 372 34.7
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 5.2e-49 199.5 369 34.1
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 5.2e-49 199.5 399 34.1
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 6.7e-49 199.1 374 34.8
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 6.7e-49 199.1 369 35.2
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.5e-48 198.0 367 36.2
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.5e-48 198.0 370 35.1
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 2.6e-48 197.2 386 34.5
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 2.6e-48 197.2 371 34.5
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 3.3e-48 196.8 373 34.6
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 3.3e-48 196.8 360 35.3
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 3.3e-48 196.8 404 34.4
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 5.7e-48 196.1 371 35.0
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 9.7e-48 195.3 381 33.6
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 1.3e-47 194.9 392 34.7
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 2.2e-47 194.1 281 40.2
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 2.8e-47 193.7 373 35.1
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 2.8e-47 193.7 371 34.2
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 4.8e-47 193.0 242 42.6
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 6.3e-47 192.6 366 35.0
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 6.3e-47 192.6 410 33.9
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 8.2e-47 192.2 417 33.1
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.1e-46 191.8 424 33.5
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.4e-46 191.4 384 34.4
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 1.4e-46 191.4 366 34.7
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.8e-46 191.0 276 40.2
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 2.4e-46 190.7 364 35.2
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.4e-46 190.7 333 37.5
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 3.1e-46 190.3 386 33.7
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 3.1e-46 190.3 318 37.7
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 4.1e-46 189.9 332 35.5
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 5.3e-46 189.5 331 37.5
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 7.0e-46 189.1 392 32.9
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 9.1e-46 188.7 385 33.2
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 9.1e-46 188.7 370 35.7
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 1.2e-45 188.3 387 32.3
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 2.0e-45 187.6 277 38.6
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.6e-45 187.2 338 35.5
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 3.5e-45 186.8 331 36.0
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 3.5e-45 186.8 375 33.6
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 4.5e-45 186.4 372 33.1
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 2.2e-44 184.1 405 34.1
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 2.9e-44 183.7 393 32.1
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 5.0e-44 183.0 372 33.3
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 6.5e-44 182.6 346 34.4
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 4.2e-43 179.9 371 33.7
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 4.2e-43 179.9 352 34.1
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 1.2e-42 178.3 318 36.2
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.0e-41 175.3 405 33.3
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.6e-40 170.6 375 32.5
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 7.5e-40 169.1 393 31.8
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 6.3e-39 166.0 323 34.7
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 7.0e-38 162.5 392 32.1
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 4.5e-37 159.8 280 37.9
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 9.8e-32 142.1 438 27.6
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 4.2e-27 126.7 285 33.3
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 1.6e-26 124.8 247 32.0
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 9.8e-24 115.5 169 37.9
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 2.2e-23 114.4 140 43.6
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.4e-22 111.7 296 29.1
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 9.2e-22 109.0 138 40.6
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.7e-21 107.5 191 39.3
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 4.6e-21 106.7 138 41.3
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.9e-21 106.3 157 41.4
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 1.7e-20 104.8 232 32.3
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 3.9e-20 103.6 241 32.0
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 6.6e-20 102.8 134 40.3
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 1.5e-19 101.7 236 32.2
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.5e-19 101.7 183 36.1
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 6.8e-17 92.8 181 33.1
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 2.6e-16 90.9 179 35.2
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 3.7e-15 87.0 132 39.4
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.0e-12 79.0 86 47.7
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 1.9e-11 74.7 118 39.8
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 8.1e-10 69.3 77 44.2
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 4.0e-09 67.0 120 36.7
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 6.8e-09 66.2 61 52.5
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 6.8e-09 66.2 61 52.5
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 7.1e-06 56.2 200 28.0


User provided reference genes

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