Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 2.0e-123 445.7 211 100.0
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 8.4e-45 184.5 194 49.5
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 3.5e-43 179.1 195 46.7
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 1.8e-42 176.8 193 48.2
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 1.8e-42 176.8 201 44.8
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 2.3e-42 176.4 195 45.6
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.3e-42 176.4 195 45.1
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 3.0e-42 176.0 201 45.8
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 3.9e-42 175.6 195 46.7
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 8.7e-42 174.5 195 46.7
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 8.7e-42 174.5 205 43.9
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.1e-41 174.1 201 43.8
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.5e-41 173.7 201 43.8
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 1.9e-41 173.3 195 45.1
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 3.3e-41 172.6 195 44.6
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 4.3e-41 172.2 195 44.6
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 4.3e-41 172.2 201 43.8
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 5.7e-41 171.8 201 43.3
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 5.7e-41 171.8 202 43.1
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 7.4e-41 171.4 191 44.0
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 7.4e-41 171.4 195 44.6
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 9.7e-41 171.0 201 43.8
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 9.7e-41 171.0 195 43.6
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 1.3e-40 170.6 196 46.9
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.3e-40 170.6 195 45.6
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 1.3e-40 170.6 195 44.1
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 1.6e-40 170.2 188 44.1
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 1.6e-40 170.2 195 44.6
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.2e-40 169.9 195 44.6
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 2.2e-40 169.9 195 46.7
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 2.2e-40 169.9 195 46.2
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 2.2e-40 169.9 195 45.1
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 2.2e-40 169.9 195 43.1
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 2.2e-40 169.9 195 45.6
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 3.7e-40 169.1 195 45.1
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 3.7e-40 169.1 195 43.6
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.7e-40 169.1 195 43.6
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 3.7e-40 169.1 201 44.8
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 3.7e-40 169.1 201 42.8
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 6.3e-40 168.3 201 42.8
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 6.3e-40 168.3 195 43.1
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 8.2e-40 167.9 195 43.1
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 8.2e-40 167.9 195 44.1
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 1.1e-39 167.5 195 44.1
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 1.1e-39 167.5 202 45.5
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 1.1e-39 167.5 195 43.6
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.4e-39 167.2 195 43.1
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.4e-39 167.2 195 44.6
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.4e-39 167.2 195 43.1
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 1.4e-39 167.2 201 43.3
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.8e-39 166.8 195 44.6
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 2.4e-39 166.4 198 44.9
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 3.1e-39 166.0 195 44.6
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 3.1e-39 166.0 202 44.6
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 4.1e-39 165.6 195 44.1
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 4.1e-39 165.6 195 45.1
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 5.3e-39 165.2 201 41.8
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 6.9e-39 164.9 195 43.6
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 6.9e-39 164.9 193 44.0
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 6.9e-39 164.9 201 41.8
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 6.9e-39 164.9 201 42.8
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 6.9e-39 164.9 195 44.1
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 9.0e-39 164.5 193 43.0
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 9.0e-39 164.5 195 43.6
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 9.0e-39 164.5 193 43.0
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 1.2e-38 164.1 195 42.6
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 1.2e-38 164.1 195 42.6
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 1.2e-38 164.1 195 42.6
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.5e-38 163.7 196 42.9
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 2.0e-38 163.3 196 41.3
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 2.0e-38 163.3 161 48.4
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 2.0e-38 163.3 195 42.6
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 2.0e-38 163.3 195 42.6
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 2.6e-38 162.9 195 43.1
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 2.6e-38 162.9 191 44.0
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 3.4e-38 162.5 199 41.7
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 4.5e-38 162.2 195 42.1
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 4.5e-38 162.2 195 42.6
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 4.5e-38 162.2 201 43.3
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 5.9e-38 161.8 195 42.1
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 5.9e-38 161.8 195 42.1
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 5.9e-38 161.8 195 42.6
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 7.7e-38 161.4 195 42.6
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 7.7e-38 161.4 195 42.6
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 7.7e-38 161.4 195 42.6
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 7.7e-38 161.4 195 44.6
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 7.7e-38 161.4 195 42.6
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 7.7e-38 161.4 195 44.1
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 1.0e-37 161.0 195 42.6
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 1.0e-37 161.0 195 42.1
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 1.3e-37 160.6 195 42.1
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 1.3e-37 160.6 202 41.6
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 1.3e-37 160.6 202 42.6
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 1.7e-37 160.2 193 42.5
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 1.7e-37 160.2 198 41.4
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 2.2e-37 159.8 161 48.4
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 2.2e-37 159.8 198 40.9
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 2.2e-37 159.8 204 40.2
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 2.2e-37 159.8 195 41.5
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 2.2e-37 159.8 201 40.8
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 2.9e-37 159.5 195 41.0
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 2.9e-37 159.5 198 41.4
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 3.8e-37 159.1 201 40.3
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 3.8e-37 159.1 202 41.6
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 3.8e-37 159.1 202 41.6
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 5.0e-37 158.7 195 42.6
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 6.5e-37 158.3 195 42.6
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 6.5e-37 158.3 195 41.5
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 8.5e-37 157.9 198 40.9
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 8.5e-37 157.9 193 42.0
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 8.5e-37 157.9 193 42.0
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 8.5e-37 157.9 193 42.0
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 4.2e-36 155.6 193 43.0
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 2.7e-35 152.9 205 42.9
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 3.6e-35 152.5 175 45.1
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 3.6e-35 152.5 161 45.3
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 1.5e-33 147.1 200 40.0
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 2.0e-33 146.7 200 43.0
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.5e-33 146.4 201 40.3
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 5.7e-33 145.2 216 38.0
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 4.8e-32 142.1 241 35.7
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 1.1e-31 141.0 152 48.0
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 5.3e-31 138.7 125 54.4
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 1.2e-30 137.5 200 37.0
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 4.2e-28 129.0 281 29.9
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 1.0e-26 124.4 148 44.6
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 2.8e-24 116.3 148 43.2
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 2.8e-24 116.3 145 42.1
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 1.1e-23 114.4 153 39.9
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 2.9e-21 106.3 134 41.0
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 1.8e-18 97.1 122 43.4
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 3.0e-18 96.3 139 39.6
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 2.0e-17 93.6 112 43.8
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 7.0e-15 85.1 84 46.4
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 7.7e-14 81.6 87 47.1
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 1.9e-12 77.0 84 41.7
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 8.8e-10 68.2 65 47.7
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 1.8e-07 60.5 89 38.2


User provided reference genes

Program Settings