Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 1.3e-282 975.7 494 100.0
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 6.8e-45 186.0 552 27.4
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 2.0e-44 184.5 561 26.7
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 8.6e-40 169.1 561 25.7
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 6.4e-35 152.9 291 34.0
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 2.4e-34 151.0 517 24.2
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 2.4e-34 151.0 520 25.0
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 4.1e-34 150.2 516 26.4
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 5.4e-34 149.8 533 25.3
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 7.0e-34 149.4 528 25.8
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 6.0e-33 146.4 517 25.7
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.0e-32 145.6 515 26.6
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 8.6e-32 142.5 534 25.1
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 1.5e-31 141.7 534 25.1
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 1.9e-31 141.4 492 26.8
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.9e-31 141.4 510 24.5
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.5e-31 141.0 533 23.6
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 5.6e-31 139.8 525 25.1
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 7.3e-31 139.4 537 25.3
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 9.5e-31 139.0 544 24.6
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 2.1e-30 137.9 542 24.7
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 3.6e-30 137.1 544 25.7
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 3.6e-30 137.1 524 25.8
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 4.7e-30 136.7 536 25.6
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 4.7e-30 136.7 518 23.9
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 8.1e-30 136.0 527 25.4
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 1.1e-29 135.6 514 25.1
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.1e-29 135.6 488 26.2
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 1.4e-29 135.2 543 25.2
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 4.0e-29 133.7 532 23.3
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 5.2e-29 133.3 544 23.5
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 8.9e-29 132.5 534 25.7
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.5e-28 131.7 522 23.4
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 2.0e-28 131.3 538 23.8
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 3.4e-28 130.6 483 24.8
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 4.4e-28 130.2 497 25.6
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 4.4e-28 130.2 540 25.9
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 5.8e-28 129.8 494 26.5
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 7.5e-28 129.4 533 24.2
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 7.5e-28 129.4 493 25.2
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 1.3e-27 128.6 531 24.1
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 1.3e-27 128.6 523 24.3
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 1.7e-27 128.3 532 24.6
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 1.7e-27 128.3 541 24.6
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 1.7e-27 128.3 487 24.8
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.7e-27 127.1 548 24.3
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 4.9e-27 126.7 530 24.0
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 4.9e-27 126.7 517 25.9
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 6.4e-27 126.3 529 23.8
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.3e-27 125.9 493 25.2
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 1.1e-26 125.6 538 23.8
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 1.1e-26 125.6 491 23.2
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.4e-26 125.2 529 22.1
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.4e-26 125.2 502 24.7
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 1.9e-26 124.8 505 25.5
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 2.4e-26 124.4 534 24.3
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 3.2e-26 124.0 538 23.8
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 4.1e-26 123.6 534 23.8
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 4.1e-26 123.6 560 24.6
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 1.2e-25 122.1 524 24.0
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 1.2e-25 122.1 541 21.4
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 1.6e-25 121.7 538 22.5
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 1.6e-25 121.7 557 22.4
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 1.6e-25 121.7 522 25.1
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 1.6e-25 121.7 524 23.3
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 2.1e-25 121.3 495 24.8
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.5e-25 120.6 515 23.9
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 3.5e-25 120.6 541 22.9
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 6.0e-25 119.8 530 24.3
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 6.0e-25 119.8 518 24.1
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 6.0e-25 119.8 537 22.3
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 7.8e-25 119.4 495 25.9
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 7.8e-25 119.4 495 25.9
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 7.8e-25 119.4 490 24.1
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 1.3e-24 118.6 476 26.1
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 1.7e-24 118.2 495 25.7
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 2.3e-24 117.9 531 24.1
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 3.0e-24 117.5 534 24.0
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 3.0e-24 117.5 546 23.6
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 3.0e-24 117.5 501 26.3
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 5.1e-24 116.7 533 23.3
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 5.1e-24 116.7 542 23.1
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 4.3e-23 113.6 533 23.5
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 4.3e-23 113.6 488 25.0
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 7.3e-23 112.8 502 22.7
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 1.6e-22 111.7 535 23.4
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 1.6e-22 111.7 508 24.4
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 2.8e-22 110.9 533 22.7
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 2.8e-22 110.9 504 22.2
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 3.6e-22 110.5 538 24.0
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 3.6e-22 110.5 537 22.9
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 4.7e-22 110.2 538 24.0
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 4.7e-22 110.2 213 33.8
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 6.2e-22 109.8 439 22.6
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 6.2e-22 109.8 487 23.0
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 1.1e-21 109.0 522 22.8
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 4.0e-21 107.1 534 22.1
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 4.0e-21 107.1 494 23.1
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 6.8e-21 106.3 493 24.7
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 8.9e-21 105.9 464 25.2
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.2e-20 105.5 300 28.3
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 3.4e-20 104.0 532 22.6
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 9.9e-20 102.4 372 26.9
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 1.7e-19 101.7 296 26.0
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 2.2e-19 101.3 352 26.4
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 6.4e-19 99.8 297 26.3
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 2.4e-18 97.8 261 27.6
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 2.4e-18 97.8 350 25.7
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 1.2e-17 95.5 300 26.0
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 1.6e-17 95.1 541 22.4
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 6.0e-17 93.2 434 22.6
CBR_g26425 Chara braunii HOM05D004671 ORTHO05D005638 1.7e-16 91.7 110 43.6
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 5.1e-16 90.1 280 25.0
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 1.1e-15 89.0 280 27.5
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 7.3e-15 86.3 318 24.8
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.3e-14 85.5 511 20.2
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 3.6e-14 84.0 230 25.7
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 4.8e-14 83.6 177 33.3
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 4.0e-13 80.5 309 28.2
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 1.5e-12 78.6 164 31.1
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.5e-12 78.6 242 25.2
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 3.4e-12 77.4 229 26.2
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 5.4e-10 70.1 115 35.7
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 1.2e-09 68.9 115 34.8
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 4.6e-09 67.0 442 20.8
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 1.3e-08 65.5 132 32.6
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 3.0e-08 64.3 109 33.9
PRCOL_00005694 Prasinoderma coloniale HOM05D004671 ORTHO05D005638 6.6e-08 63.2 83 36.1
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 3.6e-06 57.4 163 28.2


User provided reference genes

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