Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 4.3e-253 877.5 430 100.0
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 7.9e-74 282.0 434 40.6
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 9.7e-72 275.0 426 38.5
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.8e-70 270.8 428 39.0
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 4.1e-70 269.6 432 38.9
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 3.4e-69 266.5 427 37.5
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 1.3e-68 264.6 427 38.4
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 2.9e-68 263.5 428 38.1
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 5.0e-68 262.7 427 37.2
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 8.5e-68 261.9 427 39.3
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.1e-67 261.5 433 36.5
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 1.4e-67 261.2 427 37.5
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 2.5e-67 260.4 426 37.8
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 5.5e-67 259.2 427 37.5
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 5.5e-67 259.2 426 38.3
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.2e-66 258.1 427 37.5
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.6e-66 257.7 427 37.5
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 2.1e-66 257.3 433 38.3
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 2.7e-66 256.9 426 37.6
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.6e-66 256.5 427 38.2
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 4.7e-66 256.1 427 37.2
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 6.1e-66 255.8 426 37.1
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 6.1e-66 255.8 427 37.2
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 7.9e-66 255.4 430 37.9
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 1.0e-65 255.0 433 38.1
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 1.0e-65 255.0 427 37.5
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.4e-65 254.6 427 37.2
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.4e-65 254.6 427 37.2
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 1.4e-65 254.6 426 37.8
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.8e-65 254.2 433 38.1
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 1.8e-65 254.2 427 37.2
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 1.8e-65 254.2 426 36.9
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 2.3e-65 253.8 427 37.0
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 3.9e-65 253.1 429 37.8
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 3.9e-65 253.1 427 36.8
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 5.1e-65 252.7 424 38.0
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 5.1e-65 252.7 431 36.7
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 8.8e-65 251.9 428 38.1
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 1.1e-64 251.5 427 36.8
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.5e-64 251.1 427 37.5
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 2.6e-64 250.4 429 38.9
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 4.4e-64 249.6 427 36.8
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 5.7e-64 249.2 429 36.4
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 5.7e-64 249.2 429 37.1
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 5.7e-64 249.2 427 36.5
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 5.7e-64 249.2 432 34.7
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 7.4e-64 248.8 426 37.1
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 7.4e-64 248.8 429 37.1
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 9.7e-64 248.4 435 35.9
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 9.7e-64 248.4 427 36.5
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.8e-63 246.1 430 36.0
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 8.2e-63 245.4 435 37.5
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.1e-62 245.0 429 35.9
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.1e-62 245.0 429 35.9
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 1.8e-62 244.2 430 36.5
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 2.4e-62 243.8 439 36.7
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 3.1e-62 243.4 427 35.4
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 3.1e-62 243.4 430 36.5
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 5.3e-62 242.7 429 37.3
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 5.3e-62 242.7 437 35.5
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 7.0e-62 242.3 428 36.4
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.0e-61 240.7 446 35.4
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 2.6e-61 240.4 428 36.2
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 3.5e-61 240.0 432 36.1
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 5.9e-61 239.2 425 35.3
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.3e-60 238.0 427 35.6
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 4.2e-59 233.0 427 36.1
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 2.1e-58 230.7 459 32.9
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 1.0e-57 228.4 392 36.2
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 1.1e-56 224.9 491 33.2
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 4.4e-56 223.0 391 37.1
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.7e-55 221.1 380 36.6
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 4.8e-55 219.5 354 37.0
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.8e-54 217.6 427 34.4
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 1.2e-53 214.9 420 36.0
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 1.2e-53 214.9 529 32.5
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 4.5e-53 213.0 368 36.4
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.3e-52 211.5 406 35.5
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 2.5e-51 207.2 341 37.0
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 9.4e-51 205.3 384 36.2
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 1.2e-50 204.9 381 35.4
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 8.0e-50 202.2 329 37.7
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 8.0e-50 202.2 321 39.3
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.5e-48 198.0 425 33.2
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 7.5e-48 195.7 363 35.0
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.8e-47 193.7 363 35.8
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 4.1e-46 189.9 373 35.7
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 2.0e-45 187.6 553 28.0
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 2.2e-44 184.1 452 30.8
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 5.0e-44 183.0 447 31.5
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 5.0e-44 183.0 361 34.3
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 2.5e-43 180.6 362 32.6
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 4.7e-42 176.4 438 31.5
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 7.7e-37 159.1 284 36.3
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 4.2e-35 153.3 317 34.1
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-32 145.2 194 41.2
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.4e-30 137.5 235 37.0
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 4.1e-30 136.7 204 39.7
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 5.9e-29 132.9 242 34.7
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 6.6e-20 102.8 193 35.8
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.3e-17 94.4 143 38.5
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 5.8e-16 89.7 136 44.9
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 6.4e-15 86.3 157 35.0
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 6.4e-15 86.3 125 40.8
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.6e-11 73.2 88 42.0
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 5.2e-09 66.6 108 37.0
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 8.4e-07 59.3 120 33.3
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 1.9e-06 58.2 84 41.7


User provided reference genes

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