Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 2.2e-160 568.9 293 100.0
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 5.1e-16 89.4 154 37.7
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 1.1e-15 88.2 151 35.1
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 1.5e-15 87.8 156 33.3
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.3e-15 86.7 178 31.5
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 3.3e-15 86.7 168 33.3
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.3e-15 86.3 183 32.2
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 4.3e-15 86.3 183 32.2
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 9.7e-15 85.1 147 36.7
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 9.7e-15 85.1 185 33.0
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 1.3e-14 84.7 151 31.1
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 1.3e-14 84.7 164 32.9
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 1.3e-14 84.7 174 33.3
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 1.7e-14 84.3 173 32.4
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 1.7e-14 84.3 182 31.3
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 2.8e-14 83.6 168 30.4
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 3.7e-14 83.2 176 31.8
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 4.8e-14 82.8 170 31.2
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 4.8e-14 82.8 185 29.2
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 6.3e-14 82.4 140 35.7
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 8.2e-14 82.0 166 31.9
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 1.8e-13 80.9 166 31.9
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.8e-13 80.9 171 29.2
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 1.8e-13 80.9 185 31.4
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.8e-13 80.9 182 30.8
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 1.8e-13 80.9 173 30.6
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 1.8e-13 80.9 165 30.3
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 1.8e-13 80.9 163 29.4
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 1.8e-13 80.9 163 29.4
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 2.4e-13 80.5 172 29.1
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 2.4e-13 80.5 169 30.8
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 2.4e-13 80.5 171 30.4
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 2.4e-13 80.5 143 35.7
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 3.1e-13 80.1 171 29.8
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 3.1e-13 80.1 170 31.8
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.1e-13 79.7 181 29.3
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 5.3e-13 79.3 165 29.7
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 5.3e-13 79.3 185 30.3
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 6.9e-13 79.0 162 31.5
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 6.9e-13 79.0 156 34.0
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 6.9e-13 79.0 182 29.1
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 9.1e-13 78.6 149 31.5
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.2e-12 78.2 181 28.2
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 1.2e-12 78.2 194 28.9
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 1.5e-12 77.8 181 29.3
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.5e-12 77.8 181 28.7
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 1.5e-12 77.8 173 30.6
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 1.5e-12 77.8 165 29.1
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 1.5e-12 77.8 154 31.2
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 2.0e-12 77.4 146 31.5
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 2.0e-12 77.4 184 28.8
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 2.0e-12 77.4 148 30.4
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 2.6e-12 77.0 161 30.4
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 2.6e-12 77.0 173 28.9
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 2.6e-12 77.0 185 28.6
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 2.6e-12 77.0 151 31.8
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 2.6e-12 77.0 151 31.8
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 3.4e-12 76.6 182 28.6
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 3.4e-12 76.6 149 30.9
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 3.4e-12 76.6 173 29.5
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 3.4e-12 76.6 180 30.6
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 4.5e-12 76.3 162 31.5
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 5.9e-12 75.9 179 28.5
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 5.9e-12 75.9 166 28.9
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 7.7e-12 75.5 175 29.7
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 7.7e-12 75.5 169 30.2
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 1.0e-11 75.1 188 27.7
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 1.0e-11 75.1 188 27.7
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 1.0e-11 75.1 188 27.7
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 1.3e-11 74.7 182 29.1
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.3e-11 74.7 149 34.2
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 1.3e-11 74.7 149 34.2
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 1.3e-11 74.7 181 28.2
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 1.3e-11 74.7 173 28.3
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 1.7e-11 74.3 178 27.5
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 1.7e-11 74.3 183 26.8
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 1.7e-11 74.3 184 30.4
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 2.9e-11 73.6 188 27.7
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 2.9e-11 73.6 188 27.7
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.9e-11 73.6 179 28.5
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 2.9e-11 73.6 155 30.3
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.9e-11 73.6 167 31.1
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 3.8e-11 73.2 182 28.6
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 5.0e-11 72.8 194 27.8
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 5.0e-11 72.8 173 30.6
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 5.0e-11 72.8 173 30.6
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 8.5e-11 72.0 172 27.9
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 1.1e-10 71.6 193 28.5
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 1.1e-10 71.6 158 29.1
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 1.9e-10 70.9 172 27.9
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.9e-10 70.9 140 32.1
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 1.9e-10 70.9 170 31.8
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 1.9e-10 70.9 166 29.5
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 3.2e-10 70.1 163 30.7
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 4.2e-10 69.7 159 27.7
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 5.5e-10 69.3 123 31.7
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 7.2e-10 68.9 170 25.9
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 7.2e-10 68.9 122 30.3
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 7.2e-10 68.9 176 28.4
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 7.2e-10 68.9 170 30.0
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 9.4e-10 68.6 151 27.8
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 9.4e-10 68.6 89 37.1
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 1.6e-09 67.8 170 31.8
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 6.1e-09 65.9 112 36.6
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 7.9e-09 65.5 115 31.3
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 1.8e-08 64.3 171 28.7
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 2.3e-08 63.9 146 28.8
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 1.1e-07 61.6 115 33.9


User provided reference genes

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