Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G230 Micromonas commoda HOM05D003653 ORTHO05D004249 3.9e-114 414.8 216 100.0
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 4.6e-14 82.4 179 30.2
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 7.9e-14 81.6 175 29.1
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 7.9e-14 81.6 175 29.7
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 1.0e-13 81.3 175 28.6
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.0e-13 81.3 175 28.6
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.0e-13 81.3 175 28.6
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.0e-13 81.3 175 28.6
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 1.0e-13 81.3 179 29.6
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 1.3e-13 80.9 188 28.2
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.3e-13 80.9 175 28.0
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 1.3e-13 80.9 195 27.7
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 1.8e-13 80.5 195 28.7
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 3.0e-13 79.7 177 27.7
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 3.9e-13 79.3 175 28.0
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 3.9e-13 79.3 176 31.2
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 3.9e-13 79.3 197 28.9
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 3.9e-13 79.3 188 28.7
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 5.1e-13 79.0 179 28.5
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 5.1e-13 79.0 180 30.0
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 5.1e-13 79.0 184 29.9
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 6.7e-13 78.6 187 26.2
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 6.7e-13 78.6 176 29.5
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 6.7e-13 78.6 187 26.7
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 8.7e-13 78.2 200 27.5
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 8.7e-13 78.2 179 27.9
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 8.7e-13 78.2 179 30.2
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 8.7e-13 78.2 175 29.1
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 1.1e-12 77.8 175 27.4
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 1.1e-12 77.8 176 31.2
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 1.1e-12 77.8 176 31.2
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 1.5e-12 77.4 176 30.7
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 1.9e-12 77.0 179 26.8
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 2.5e-12 76.6 187 26.7
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 2.5e-12 76.6 187 26.7
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 2.5e-12 76.6 205 26.3
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 2.5e-12 76.6 180 28.9
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 2.5e-12 76.6 179 26.8
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 4.3e-12 75.9 175 28.6
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 4.3e-12 75.9 176 26.7
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 4.3e-12 75.9 175 27.4
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 4.3e-12 75.9 179 27.9
BcaNung06460 Brassica carinata HOM05D003653 ORTHO05D004249 5.7e-12 75.5 177 26.6
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 5.7e-12 75.5 180 29.4
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 5.7e-12 75.5 179 29.1
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 5.7e-12 75.5 179 26.8
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 5.7e-12 75.5 179 27.4
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 7.4e-12 75.1 175 28.6
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 9.6e-12 74.7 172 28.5
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 9.6e-12 74.7 177 26.6
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 9.6e-12 74.7 177 26.6
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 9.6e-12 74.7 177 26.6
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 9.6e-12 74.7 177 26.6
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 9.6e-12 74.7 177 26.6
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 9.6e-12 74.7 177 26.6
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 9.6e-12 74.7 184 26.1
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 9.6e-12 74.7 177 26.6
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 9.6e-12 74.7 179 27.9
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.3e-11 74.3 176 27.3
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.3e-11 74.3 176 27.3
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.3e-11 74.3 210 24.3
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.3e-11 74.3 179 26.3
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 1.3e-11 74.3 183 25.1
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 1.3e-11 74.3 175 27.4
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 1.3e-11 74.3 177 26.0
CSS0022852 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.6e-11 73.9 175 26.9
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 1.6e-11 73.9 176 30.1
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 1.6e-11 73.9 179 27.4
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.6e-11 73.9 187 26.2
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 1.6e-11 73.9 176 29.5
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.6e-11 73.9 195 29.2
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 1.6e-11 73.9 175 26.9
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 1.6e-11 73.9 186 28.0
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 2.1e-11 73.6 179 26.8
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 2.1e-11 73.6 179 26.3
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 2.1e-11 73.6 179 27.4
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.1e-11 73.6 174 27.0
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 2.1e-11 73.6 175 27.4
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 2.1e-11 73.6 176 30.1
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 2.8e-11 73.2 179 26.8
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 2.8e-11 73.2 177 26.6
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 2.8e-11 73.2 179 26.3
Haze_06172 Corylus avellana HOM05D003653 ORTHO05D004249 2.8e-11 73.2 179 25.7
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.8e-11 73.2 175 27.4
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 3.7e-11 72.8 175 26.9
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 4.8e-11 72.4 179 25.7
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 4.8e-11 72.4 175 27.4
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 4.8e-11 72.4 179 26.3
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 6.3e-11 72.0 179 26.3
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 6.3e-11 72.0 197 24.9
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 6.3e-11 72.0 173 28.3
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 6.3e-11 72.0 175 26.9
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 6.3e-11 72.0 184 25.0
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 8.2e-11 71.6 185 25.9
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 8.2e-11 71.6 172 25.6
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 8.2e-11 71.6 178 25.8
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 1.1e-10 71.2 183 24.6
Lj6A103G48 Lonicera japonica HOM05D003653 ORTHO05D004249 1.1e-10 71.2 183 24.0
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 1.1e-10 71.2 176 28.4
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 1.4e-10 70.9 179 25.1
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 1.8e-10 70.5 177 26.6
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 1.8e-10 70.5 179 26.3
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 2.4e-10 70.1 179 27.4
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 4.1e-10 69.3 180 26.1
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 5.3e-10 68.9 179 26.8
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 6.9e-10 68.6 175 25.1
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 6.9e-10 68.6 212 23.6
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 6.9e-10 68.6 175 26.3
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 6.9e-10 68.6 177 23.7
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 1.2e-09 67.8 156 30.1
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 2.0e-09 67.0 179 25.1
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 2.0e-09 67.0 158 28.5
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 2.0e-09 67.0 142 28.2
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 3.4e-09 66.2 202 23.8
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 1.0e-08 64.7 190 26.3
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.7e-08 63.9 191 25.7
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 1.6e-06 57.4 199 22.1
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 3.6e-06 56.2 149 26.8


User provided reference genes

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