Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 2.7e-152 542.0 271 100.0
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 3.8e-21 106.3 204 35.3
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 2.4e-20 103.6 225 33.3
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 9.2e-20 101.7 233 33.9
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 1.2e-19 101.3 140 38.6
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 1.2e-19 101.3 177 35.6
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 2.1e-19 100.5 170 37.6
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 2.7e-19 100.1 186 35.5
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 2.7e-19 100.1 177 35.6
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 7.8e-19 98.6 188 32.4
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 1.7e-18 97.4 137 38.7
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.7e-18 97.4 180 34.4
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 2.3e-18 97.1 165 33.3
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 3.0e-18 96.7 218 32.1
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 6.6e-18 95.5 163 36.2
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 1.1e-17 94.7 135 41.5
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 1.5e-17 94.4 211 31.8
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 3.3e-17 93.2 201 31.8
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 3.3e-17 93.2 195 33.3
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 4.3e-17 92.8 191 33.0
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 5.6e-17 92.4 140 37.9
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 9.6e-17 91.7 155 36.8
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 9.6e-17 91.7 168 34.5
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 1.6e-16 90.9 135 37.8
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 1.6e-16 90.9 188 32.4
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.6e-16 90.9 156 35.9
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 1.6e-16 90.9 150 36.0
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 2.1e-16 90.5 169 32.5
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 2.1e-16 90.5 184 32.1
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 2.1e-16 90.5 154 35.1
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 2.1e-16 90.5 155 34.8
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 2.8e-16 90.1 169 32.5
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 2.8e-16 90.1 135 39.3
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 2.8e-16 90.1 135 37.0
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 2.8e-16 90.1 185 30.3
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 3.6e-16 89.7 198 33.8
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 3.6e-16 89.7 205 33.2
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 3.6e-16 89.7 178 38.2
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 3.6e-16 89.7 128 38.3
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 6.2e-16 89.0 145 35.9
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 1.1e-15 88.2 165 32.7
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.1e-15 88.2 135 37.8
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 1.1e-15 88.2 135 37.8
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 1.4e-15 87.8 185 30.3
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 1.4e-15 87.8 169 32.0
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 1.4e-15 87.8 192 34.4
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 1.4e-15 87.8 135 37.8
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.8e-15 87.4 204 32.4
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 1.8e-15 87.4 204 31.9
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 1.8e-15 87.4 164 32.9
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 1.8e-15 87.4 139 34.5
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 1.8e-15 87.4 155 34.2
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 1.8e-15 87.4 168 32.7
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 2.4e-15 87.0 195 30.3
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 2.4e-15 87.0 211 30.3
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 2.4e-15 87.0 137 35.0
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 2.4e-15 87.0 140 37.1
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 3.1e-15 86.7 193 33.2
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 3.1e-15 86.7 135 36.3
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 3.1e-15 86.7 128 37.5
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 3.1e-15 86.7 131 38.9
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 4.0e-15 86.3 204 29.9
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 4.0e-15 86.3 193 33.7
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 4.0e-15 86.3 140 37.9
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 4.0e-15 86.3 127 37.8
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 4.0e-15 86.3 127 37.8
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 5.3e-15 85.9 168 35.7
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 5.3e-15 85.9 198 31.8
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 5.3e-15 85.9 198 31.8
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 5.3e-15 85.9 168 34.5
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 6.9e-15 85.5 128 35.9
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 9.0e-15 85.1 128 39.1
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 1.2e-14 84.7 163 35.6
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 1.2e-14 84.7 175 34.9
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 1.5e-14 84.3 133 39.8
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 1.5e-14 84.3 174 31.6
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 1.5e-14 84.3 137 35.0
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 1.5e-14 84.3 205 30.7
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 1.5e-14 84.3 141 34.8
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 2.0e-14 84.0 168 35.7
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 2.0e-14 84.0 128 38.3
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 2.0e-14 84.0 128 36.7
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 2.6e-14 83.6 128 39.1
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 2.6e-14 83.6 139 32.4
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 2.6e-14 83.6 155 32.9
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 3.4e-14 83.2 184 31.0
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 4.4e-14 82.8 142 32.4
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 4.4e-14 82.8 128 39.1
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 7.6e-14 82.0 137 33.6
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 1.3e-13 81.3 163 33.7
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 1.7e-13 80.9 110 40.0
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 2.2e-13 80.5 153 33.3
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 2.2e-13 80.5 177 31.1
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 2.9e-13 80.1 212 30.7
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 4.9e-13 79.3 128 39.1
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 4.9e-13 79.3 136 32.4
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 4.9e-13 79.3 208 29.8
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 6.4e-13 79.0 128 35.2
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 6.4e-13 79.0 204 29.4
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 8.4e-13 78.6 166 31.9
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 8.4e-13 78.6 139 33.1
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 1.1e-12 78.2 190 31.6
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.4e-12 77.8 150 32.0
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 2.4e-12 77.0 128 36.7
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 2.4e-12 77.0 198 29.3
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 7.1e-12 75.5 154 33.1
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.2e-11 74.7 177 28.2
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 3.5e-11 73.2 128 35.2
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 7.8e-11 72.0 175 30.3
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 3.9e-10 69.7 91 39.6
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 3.6e-08 63.2 141 30.5
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 6.2e-08 62.4 94 35.1
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 8.1e-08 62.0 98 34.7
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 2.6e-06 57.0 168 24.4


User provided reference genes

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