Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G111 Micromonas commoda HOM05D004609 ORTHO05D005537 1.3e-160 569.7 290 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1656 Anthoceros agrestis HOM05D004609 ORTHO05D005537 9.5e-55 218.0 207 52.7
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 2.1e-54 216.9 209 50.2
CDE09G0954 Ceratophyllum demersum HOM05D004609 ORTHO05D005537 1.4e-53 214.2 208 49.5
Pp3c1_35360 Physcomitrium patens HOM05D004609 ORTHO05D005537 2.0e-52 210.3 210 51.9
ATR0115G025 Amborella trichopoda HOM05D004609 ORTHO05D005537 3.4e-52 209.5 209 46.9
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 3.4e-52 209.5 209 48.3
CsaV3_1G012730 Cucumis sativus L. HOM05D004609 ORTHO05D005537 7.5e-52 208.4 227 46.7
arahy.Tifrunner.gnm1.ann1.M55FGE Arachis hypogaea HOM05D004609 ORTHO05D005537 1.7e-51 207.2 209 50.2
MBI07_g19316_MAGBIO Magnolia biondii HOM05D004609 ORTHO05D005537 1.7e-51 207.2 211 48.3
MELO3C026847.2 Cucumis melo HOM05D004609 ORTHO05D005537 2.2e-51 206.8 227 46.7
Sc03g0007720 Simmondsia chinensis HOM05D004609 ORTHO05D005537 2.2e-51 206.8 207 48.3
Thecc.09G339900 Theobroma cacao HOM05D004609 ORTHO05D005537 2.2e-51 206.8 205 49.8
HanXRQChr01g0016861 Helianthus annuus HOM05D004609 ORTHO05D005537 3.7e-51 206.1 209 48.8
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 3.7e-51 206.1 209 47.8
Gorai.013G266600 Gossypium raimondii HOM05D004609 ORTHO05D005537 6.4e-51 205.3 207 47.8
PGR102G0162 Punica granatum HOM05D004609 ORTHO05D005537 6.4e-51 205.3 215 47.9
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 8.3e-51 204.9 207 47.8
Gohir.D13G235900 Gossypium hirsutum HOM05D004609 ORTHO05D005537 8.3e-51 204.9 207 47.8
SalBow6G5279 Salvia bowleyana HOM05D004609 ORTHO05D005537 1.1e-50 204.5 205 48.8
BraA10t43855Z Brassica rapa HOM05D004609 ORTHO05D005537 1.4e-50 204.1 238 45.4
Lj3g0003868 Lotus japonicus HOM05D004609 ORTHO05D005537 1.4e-50 204.1 202 50.5
Lalb_Chr19g0137311 Lupinus albus HOM05D004609 ORTHO05D005537 1.4e-50 204.1 208 49.5
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 1.4e-50 204.1 209 47.8
arahy.Tifrunner.gnm1.ann1.DB762C Arachis hypogaea HOM05D004609 ORTHO05D005537 1.8e-50 203.8 205 50.2
arahy.Tifrunner.gnm1.ann1.ZK6QPF Arachis hypogaea HOM05D004609 ORTHO05D005537 1.8e-50 203.8 205 50.2
Lj1A191G19 Lonicera japonica HOM05D004609 ORTHO05D005537 1.8e-50 203.8 207 48.8
Nn2g13092 Nelumbo nucifera HOM05D004609 ORTHO05D005537 1.8e-50 203.8 209 47.8
PSO478G0080 Papaver somniferum HOM05D004609 ORTHO05D005537 1.8e-50 203.8 209 48.3
CANSAT54G0849 Cannabis sativa HOM05D004609 ORTHO05D005537 2.4e-50 203.4 190 52.1
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 2.4e-50 203.4 211 48.3
Eucgr.B02494 Eucalyptus grandis HOM05D004609 ORTHO05D005537 2.4e-50 203.4 204 49.5
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 2.4e-50 203.4 209 47.8
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 3.2e-50 203.0 210 45.7
A10p17780 Brassica napus HOM05D004609 ORTHO05D005537 4.1e-50 202.6 235 45.5
Duzib168G0882 Durio zibethinus HOM05D004609 ORTHO05D005537 4.1e-50 202.6 205 47.8
Mapoly0053s0017 Marchantia polymorpha HOM05D004609 ORTHO05D005537 4.1e-50 202.6 209 48.3
Psat1g080680 Pisum sativum HOM05D004609 ORTHO05D005537 4.1e-50 202.6 204 50.0
Zm00001eb007760 Zea mays HOM05D004609 ORTHO05D005537 4.1e-50 202.6 213 48.4
C09p53290 Brassica napus HOM05D004609 ORTHO05D005537 5.4e-50 202.2 235 45.5
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 5.4e-50 202.2 209 47.8
THA.LOC104799500 Tarenaya hassleriana HOM05D004609 ORTHO05D005537 5.4e-50 202.2 226 46.0
COL.COLO4_18340 Corchorus olitorius HOM05D004609 ORTHO05D005537 7.0e-50 201.8 205 47.8
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 7.0e-50 201.8 209 47.8
Glyma.11G147000 Glycine max HOM05D004609 ORTHO05D005537 7.0e-50 201.8 202 51.0
Oeu002864.1 Olea europaea HOM05D004609 ORTHO05D005537 7.0e-50 201.8 200 48.5
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 9.2e-50 201.4 204 47.5
BcaB08g36354 Brassica carinata HOM05D004609 ORTHO05D005537 9.2e-50 201.4 224 46.9
Ciclev10029204m.g Citrus clementina HOM05D004609 ORTHO05D005537 9.2e-50 201.4 211 47.4
PSO017G0942 Papaver somniferum HOM05D004609 ORTHO05D005537 9.2e-50 201.4 208 48.6
Sed0020077 Sechium edule HOM05D004609 ORTHO05D005537 9.2e-50 201.4 207 48.8
Hund10347 Selenicereus undatus HOM05D004609 ORTHO05D005537 9.2e-50 201.4 209 47.4
EL10Ac7g18241 Beta vulgaris HOM05D004609 ORTHO05D005537 1.2e-49 201.1 202 49.0
TAR623G1761 Trochodendron aralioides HOM05D004609 ORTHO05D005537 1.2e-49 201.1 198 49.5
BolC9t58203H Brassica oleracea HOM05D004609 ORTHO05D005537 1.6e-49 200.7 235 45.1
Migut.D02219 Erythranthe guttata HOM05D004609 ORTHO05D005537 1.6e-49 200.7 205 47.8
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 2.0e-49 200.3 209 47.4
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 2.0e-49 200.3 209 47.4
MD11G1134900 Malus domestica HOM05D004609 ORTHO05D005537 2.0e-49 200.3 209 47.4
QL03p063529 Quercus lobata HOM05D004609 ORTHO05D005537 2.0e-49 200.3 207 47.3
QL03p063925 Quercus lobata HOM05D004609 ORTHO05D005537 2.0e-49 200.3 207 47.3
TPR.G15569 Trifolium pratense HOM05D004609 ORTHO05D005537 2.0e-49 200.3 202 50.0
HPP92_018599 Vanilla planifolia HOM05D004609 ORTHO05D005537 2.0e-49 200.3 208 47.6
Ah.15g094800 Amaranthus hybridus HOM05D004609 ORTHO05D005537 2.7e-49 199.9 213 47.4
BcaC04g19719 Brassica carinata HOM05D004298 ORTHO05D006236 2.7e-49 199.9 221 46.6
Cfa011322 Carpinus fangiana HOM05D004609 ORTHO05D005537 2.7e-49 199.9 207 48.8
DCAR_006058 Daucus carota HOM05D004609 ORTHO05D005537 2.7e-49 199.9 207 48.3
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 2.7e-49 199.9 207 48.8
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 2.7e-49 199.9 209 46.9
Cpa.g.sc216.14 Carica papaya HOM05D004609 ORTHO05D005537 3.5e-49 199.5 207 48.3
Hma1.2p1_1031F.1_g250010 Hydrangea macrophylla HOM05D004609 ORTHO05D005537 3.5e-49 199.5 207 47.8
QL01p022329 Quercus lobata HOM05D004609 ORTHO05D005537 3.5e-49 199.5 207 48.3
TWI79G0533 Tripterygium wilfordii HOM05D004609 ORTHO05D005537 3.5e-49 199.5 207 48.3
Manes.11G144600 Manihot esculenta HOM05D004609 ORTHO05D005537 4.6e-49 199.1 207 48.3
RcHm_v2.0_Chr5g0059481 Rosa chinensis HOM05D004609 ORTHO05D005537 4.6e-49 199.1 209 46.9
unitig_749.g13641 Utricularia gibba HOM05D004609 ORTHO05D005537 4.6e-49 199.1 209 48.3
Dinv32752 Davidia involucrata HOM05D004609 ORTHO05D005537 5.9e-49 198.7 211 47.4
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 5.9e-49 198.7 202 50.5
ECA248G0132 Erigeron canadensis HOM05D004609 ORTHO05D005537 7.8e-49 198.4 207 48.3
Potri.009G025500 Populus trichocarpa HOM05D004609 ORTHO05D005537 7.8e-49 198.4 207 47.8
Actinidia07134 Actinidia chinensis HOM05D004609 ORTHO05D005537 1.0e-48 198.0 207 46.9
Ca_05255_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 1.0e-48 198.0 203 48.3
Sp6g22160 Schrenkiella parvula HOM05D004609 ORTHO05D005537 1.0e-48 198.0 231 44.6
Phvul.011G078800 Phaseolus vulgaris HOM05D004609 ORTHO05D005537 1.3e-48 197.6 202 50.0
Haze_10438 Corylus avellana HOM05D004609 ORTHO05D005537 1.7e-48 197.2 192 50.5
CAN.G631.22 Capsicum annuum HOM05D004609 ORTHO05D005537 3.0e-48 196.4 207 46.9
CARHR274250 Cardamine hirsuta HOM05D004609 ORTHO05D005537 3.0e-48 196.4 234 44.4
SGA_v2.0_scaffold2G00896 Striga asiatica HOM05D004609 ORTHO05D005537 3.0e-48 196.4 205 48.3
CiPaw.13G112500 Carya illinoinensis HOM05D004609 ORTHO05D005537 3.9e-48 196.1 198 49.5
Lsat_1_v5_gn_1_65361 Lactuca sativa HOM05D004609 ORTHO05D005537 3.9e-48 196.1 207 48.8
Sopen11g028080 Solanum pennellii HOM05D004609 ORTHO05D005537 3.9e-48 196.1 210 46.2
PGSC0003DMG400008104 Solanum tuberosum HOM05D004609 ORTHO05D005537 3.9e-48 196.1 207 46.4
Atru.chr3.3636 Acer truncatum HOM05D004609 ORTHO05D005537 6.6e-48 195.3 198 48.0
FAN25G2211 Fragaria x ananassa HOM05D004609 ORTHO05D005537 6.6e-48 195.3 209 46.4
Rhsim13G0094100 Rhododendron simsii HOM05D004609 ORTHO05D005537 6.6e-48 195.3 219 45.2
Sabra09G0016900 Salix brachista HOM05D004609 ORTHO05D005537 6.6e-48 195.3 207 47.3
AL8G37180 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 8.6e-48 194.9 227 44.5
Medtr4g059530 Medicago truncatula HOM05D004609 ORTHO05D005537 8.6e-48 194.9 190 51.1
Medtr4g459430 Medicago truncatula HOM05D004609 ORTHO05D005537 8.6e-48 194.9 190 51.1
Hund02313 Selenicereus undatus HOM05D004609 ORTHO05D005537 1.1e-47 194.5 209 45.5
CSS0022919 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 1.5e-47 194.1 204 47.1
CSS0023307 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 1.5e-47 194.1 195 48.2
AUR62001379 Chenopodium quinoa HOM05D004609 ORTHO05D005537 1.5e-47 194.1 204 46.1
Solyc11g069360.2 Solanum lycopersicum HOM05D004609 ORTHO05D005537 1.5e-47 194.1 207 46.4
GSVIVG01025180001 Vitis vinifera HOM05D004609 ORTHO05D005537 1.5e-47 194.1 207 45.9
Carub.0008s2127 Capsella rubella HOM05D004609 ORTHO05D005537 1.9e-47 193.7 227 44.5
Oeu059598.1 Olea europaea HOM05D004609 ORTHO05D005537 2.5e-47 193.4 205 46.3
Cc01_g11180 Coffea canephora HOM05D004609 ORTHO05D005537 4.3e-47 192.6 207 45.9
CBR_g359 Chara braunii HOM05D004609 ORTHO05D005537 5.6e-47 192.2 222 46.8
Rhsim01G0217400 Rhododendron simsii HOM05D004609 ORTHO05D005537 1.2e-46 191.0 207 46.4
DCAR_013489 Daucus carota HOM05D004609 ORTHO05D005537 3.6e-46 189.5 206 45.6
SMO232G0060 Selaginella moellendorffii HOM05D004609 ORTHO05D005537 6.2e-46 188.7 193 50.3
AUR62009522 Chenopodium quinoa HOM05D004609 ORTHO05D005537 8.0e-46 188.3 189 47.1
AUR62025599 Chenopodium quinoa HOM05D004609 ORTHO05D005537 8.0e-46 188.3 189 47.1
SalBow3G2420 Salvia bowleyana HOM05D004609 ORTHO05D005537 1.8e-45 187.2 234 42.7
Aa31LG1G12570 Aethionema arabicum HOM05D004609 ORTHO05D005537 6.8e-45 185.3 207 46.4
Nitab4.5_0000650g0230 Nicotiana tabacum HOM05D004609 ORTHO05D005537 8.9e-45 184.9 207 44.9
Thhalv10014329m.g Eutrema salsugineum HOM05D004609 ORTHO05D005537 7.5e-44 181.8 188 49.5
CBR_g32631 Chara braunii HOM05D004609 ORTHO05D005537 9.8e-44 181.4 222 45.0
Peaxi162Scf00270g00828 Petunia axillaris HOM05D004609 ORTHO05D005537 4.9e-43 179.1 192 46.4
ClCG03G002070 Citrullus lanatus HOM05D004609 ORTHO05D005537 2.4e-42 176.8 289 35.6
arahy.Tifrunner.gnm1.ann1.GT28YG Arachis hypogaea HOM05D004609 ORTHO05D005537 3.9e-40 169.5 175 48.6
SGA_v2.0_scaffold80G25763 Striga asiatica HOM05D004609 ORTHO05D005537 5.6e-39 165.6 168 47.0
BcaB01g04662 Brassica carinata HOM05D004609 ORTHO05D005537 7.3e-39 165.2 194 46.4
Nitab4.5_0004205g0030 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.3e-37 160.2 175 45.1
Nitab4.5_0005621g0180 Nicotiana tabacum HOM05D004609 ORTHO05D005537 8.9e-37 158.3 156 48.7
SHI25734 Sapria himalayana HOM05D004609 ORTHO05D005537 1.2e-36 157.9 155 48.4
Haze_26358 Corylus avellana HOM05D004609 ORTHO05D005537 4.9e-35 152.5 198 41.4
Nitab4.5_0006639g0040 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.4e-34 150.2 200 41.0
Nitab4.5_0012973g0010 Nicotiana tabacum HOM05D004609 ORTHO05D005537 3.5e-33 146.4 164 44.5
vmacro03196 Vaccinium macrocarpon HOM05D004609 ORTHO05D005537 3.5e-33 146.4 157 47.1
Nitab4.5_0006639g0020 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.5e-28 131.0 156 43.6
AL4G25930 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 8.4e-27 125.2 149 44.3
PRCOL_00000940 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 2.3e-24 117.1 185 40.0
Nitab4.5_0005621g0150 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.5e-23 114.4 117 47.0
Nitab4.5_0005621g0170 Nicotiana tabacum HOM05D004609 ORTHO05D005537 4.3e-23 112.8 192 32.3
CSS0027878 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 2.1e-22 110.5 168 37.5
AT5G60590 Arabidopsis thaliana HOM05D004609 ORTHO05D005537 1.3e-19 101.3 117 44.4
A03p11090 Brassica napus HOM05D004609 ORTHO05D005537 1.6e-17 94.4 106 45.3
BraA03t10423Z Brassica rapa HOM05D004609 ORTHO05D005537 1.6e-17 94.4 106 45.3
CSS0039805 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 3.3e-15 86.7 127 37.0
CAN.G604.3 Capsicum annuum HOM05D004609 ORTHO05D005537 2.8e-14 83.6 99 43.4
Nitab4.5_0006639g0060 Nicotiana tabacum HOM05D004609 ORTHO05D005537 4.0e-13 79.7 101 39.6
C03p12780 Brassica napus HOM05D004609 ORTHO05D005537 3.4e-12 76.6 74 48.6
CAN.G1153.4 Capsicum annuum HOM05D004609 ORTHO05D005537 1.7e-11 74.3 99 37.4
AUR62013942 Chenopodium quinoa HOM05D004609 ORTHO05D005537 4.9e-11 72.8 82 43.9
Nitab4.5_0006639g0090 Nicotiana tabacum HOM05D004609 ORTHO05D005537 8.4e-11 72.0 105 38.1
Cre05.g234657 Chlamydomonas reinhardtii HOM05D004609 ORTHO05D005537 1.4e-10 71.2 177 33.9
Glyma.12G067902 Glycine max HOM05D004609 ORTHO05D005537 6.0e-09 65.9 93 40.9
PRCOL_00005540 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 1.3e-08 64.7 141 31.2
Ca_29294_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 6.2e-06 55.8 130 27.7


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