Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI19_g14893_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D013556 1.8e-127 459.1 215 100.0
MBI18_g08811_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 1.7e-37 160.2 108 64.8
MBI16_g24354_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 5.4e-31 138.7 121 57.0
MBI05_g22627_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D013556 1.6e-27 127.1 137 54.7
MBI12_g13265_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 7.6e-17 91.7 106 48.1
MBI19_g21293_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 7.6e-17 91.7 82 51.2
MBI08_g13409_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 1.7e-16 90.5 50 74.0
MBI08_g03687_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 1.9e-15 87.0 49 69.4
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.3e-13 80.1 97 42.3
MBI02_g02723_MAGBIO Magnolia biondii HOM05D024168 ORTHO05D013556 5.1e-13 79.0 67 59.7
QL03p042692 Quercus lobata HOM05D000004 ORTHO05D000002 8.7e-13 78.2 119 35.3
RcHm_v2.0_Chr5g0049101 Rosa chinensis HOM05D000004 ORTHO05D000224 1.1e-12 77.8 160 33.1
CiPaw.03G177700 Carya illinoinensis HOM05D000004 ORTHO05D000224 5.6e-12 75.5 111 36.9
CiPaw.14G122600 Carya illinoinensis HOM05D000004 ORTHO05D000224 9.6e-12 74.7 111 36.9
Hund30849 Selenicereus undatus HOM05D000004 ORTHO05D000224 1.3e-11 74.3 97 42.3
CiPaw.02G045600 Carya illinoinensis HOM05D000004 ORTHO05D000224 2.1e-11 73.6 111 36.9
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.1e-11 73.6 124 35.5
CiPaw.05G010700 Carya illinoinensis HOM05D000004 ORTHO05D000034 3.6e-11 72.8 111 36.0
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 3.6e-11 72.8 206 30.6
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 8.1e-11 71.6 124 35.5
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-10 70.9 152 32.2
QL05p075262 Quercus lobata HOM05D000004 ORTHO05D000002 1.4e-10 70.9 119 32.8
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 1.8e-10 70.5 160 29.4
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.4e-10 70.1 107 39.3
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 3.1e-10 69.7 107 37.4
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.0e-10 69.3 166 28.9
Rhsim10G0127900 Rhododendron simsii HOM05D011308 ORTHO05D000034 4.0e-10 69.3 97 41.2
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 5.3e-10 68.9 107 35.5
MBI19_g33419_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D013556 1.2e-09 67.8 53 62.3
PSO017G1176 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-09 67.8 106 34.9
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 1.5e-09 67.4 97 40.2
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.5e-09 67.4 124 35.5
CSS0007018 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.0e-09 67.0 106 34.9
QL08p035596 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-09 66.6 109 33.0
CSS0021557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-09 66.2 104 34.6
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-09 65.9 104 33.7
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-09 65.9 104 33.7
MD02G1270300 Malus domestica HOM05D000004 ORTHO05D000224 4.5e-09 65.9 98 32.7
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.8e-09 65.5 104 33.7
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.8e-09 65.5 139 30.2
COL.COLO4_29881 Corchorus olitorius HOM05D000004 ORTHO05D000034 5.8e-09 65.5 97 35.1
THA.LOC104825399 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 5.8e-09 65.5 104 33.7
Ah.05g172160 Amaranthus hybridus HOM05D000004 ORTHO05D000224 7.6e-09 65.1 109 36.7
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 7.6e-09 65.1 139 30.9
Oeu003508.1 Olea europaea HOM05D000004 ORTHO05D000034 7.6e-09 65.1 109 31.2
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 7.6e-09 65.1 107 35.5
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 7.6e-09 65.1 130 33.1
THA.LOC104801876 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.6e-09 65.1 97 36.1
THA.LOC104810578 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.6e-09 65.1 123 32.5
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.9e-09 64.7 104 36.5
THA.LOC104827527 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 9.9e-09 64.7 104 33.7
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-08 64.3 97 37.1
Ca_28406_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.7e-08 63.9 103 38.8
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-08 63.9 97 37.1
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-08 63.9 97 37.1
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.9 97 37.1
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-08 63.9 97 37.1
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-08 63.9 97 37.1
PSO339G1570 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-08 63.9 107 32.7
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-08 63.9 97 37.1
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-08 63.9 97 37.1
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 1.7e-08 63.9 97 37.1
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 1.7e-08 63.9 97 37.1
PSO832G2831 Papaver somniferum HOM05D000004 ORTHO05D000034 1.7e-08 63.9 105 33.3
THA.LOC104800026 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 1.7e-08 63.9 104 32.7
PSO170G4924 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-08 63.5 107 33.6
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.9e-08 63.2 152 28.3
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-08 63.2 166 25.9
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 2.9e-08 63.2 98 34.7
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 2.9e-08 63.2 97 37.1
THA.LOC104804486 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.9e-08 63.2 124 31.5
THA.LOC104804682 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.9e-08 63.2 107 31.8
THA.LOC104815156 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.9e-08 63.2 124 31.5
THA.LOC104825728 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.9e-08 63.2 124 31.5
THA.LOC109116733 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.9e-08 63.2 124 31.5
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-08 62.8 104 32.7
CSS0041497 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-08 62.8 97 35.1
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 3.8e-08 62.8 98 35.7
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 3.8e-08 62.8 97 37.1
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-08 62.8 97 36.1
QL03p001613 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-08 62.8 93 35.5
QL05p006227 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-08 62.8 103 35.9
QL09p028348 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-08 62.8 103 35.9
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 3.8e-08 62.8 106 33.0
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.8e-08 62.8 106 33.0
FvH4_2g11454 Fragaria vesca HOM05D000004 ORTHO05D000034 4.9e-08 62.4 154 29.9
FvH4_3g19661 Fragaria vesca HOM05D000004 ORTHO05D000224 4.9e-08 62.4 153 30.1
FvH4_7g04361 Fragaria vesca HOM05D000004 ORTHO05D000224 4.9e-08 62.4 107 34.6
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 4.9e-08 62.4 122 33.6
THA.LOC104807088 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 4.9e-08 62.4 124 31.5
THA.LOC104815204 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 4.9e-08 62.4 124 30.6
THA.LOC109116239 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.9e-08 62.4 173 26.6
THA.LOC109116484 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 4.9e-08 62.4 104 32.7
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.4e-08 62.0 104 32.7
Oeu036360.1 Olea europaea HOM05D000004 ORTHO05D000224 6.4e-08 62.0 109 30.3
PSO170G0900 Papaver somniferum HOM05D000004 ORTHO05D000224 6.4e-08 62.0 101 32.7
QL93p2008_0037 Quercus lobata HOM05D000004 ORTHO05D000002 6.4e-08 62.0 103 35.0
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-08 61.6 106 34.0
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.4e-08 61.6 104 35.6
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.1e-07 61.2 104 35.6
CiPaw.12G010400 Carya illinoinensis HOM05D000004 ORTHO05D000224 1.1e-07 61.2 112 33.0
THA.LOC104800231 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 1.1e-07 61.2 124 31.5
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 1.4e-07 60.8 105 32.4
ClCG02G010440 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.4e-07 60.8 99 32.3
FvH4_4g16178 Fragaria vesca HOM05D000004 ORTHO05D000224 1.4e-07 60.8 154 29.2
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.4e-07 60.8 106 36.8
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.4e-07 60.8 106 36.8
Thecc.02G165200 Theobroma cacao HOM05D010356 ORTHO05D000034 1.4e-07 60.8 92 33.7
Thecc.K0005200 Theobroma cacao HOM05D010356 ORTHO05D000034 1.4e-07 60.8 93 35.5
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 1.9e-07 60.5 101 33.7
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 1.9e-07 60.5 101 33.7
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.9e-07 60.5 104 36.5
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.9e-07 60.5 104 36.5
Ca_05649_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.9e-07 60.5 100 33.0
Hma1.2p1_0032F.1_g019000 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.9e-07 60.5 113 35.4
MBI05_g38605_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D013556 1.9e-07 60.5 55 54.5
MBI19_g33418_MAGBIO Magnolia biondii HOM05D010253 ORTHO05D000224 1.9e-07 60.5 31 71.0
Thecc.06G051600 Theobroma cacao HOM05D010356 ORTHO05D000034 1.9e-07 60.5 93 35.5
Thecc.09G178000 Theobroma cacao HOM05D010356 ORTHO05D000034 1.9e-07 60.5 92 34.8
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-07 60.1 152 26.3
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 2.4e-07 60.1 89 37.1
QL11p016154 Quercus lobata HOM05D000567 ORTHO05D000224 2.4e-07 60.1 105 31.4
Hma1.2p1_0344F.1_g131150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.2e-07 59.7 101 35.6
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 3.2e-07 59.7 107 34.6
Rhsim11G0030500 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.2e-07 59.7 106 34.9
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.2e-07 59.7 127 31.5
VMungo1309G2103 Vigna mungo HOM05D000004 ORTHO05D000224 3.2e-07 59.7 100 36.0
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 4.2e-07 59.3 127 31.5
PSO170G4224 Papaver somniferum HOM05D000004 ORTHO05D000224 5.5e-07 58.9 108 33.3
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 5.5e-07 58.9 109 33.0
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.5e-07 58.9 126 30.2
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 5.5e-07 58.9 98 34.7
Hund14738 Selenicereus undatus HOM05D000004 ORTHO05D000224 5.5e-07 58.9 97 36.1
Thecc.06G081500 Theobroma cacao HOM05D010356 ORTHO05D000034 5.5e-07 58.9 92 33.7
vmacro21906 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 5.5e-07 58.9 157 30.6
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 7.1e-07 58.5 106 36.8
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 7.1e-07 58.5 158 25.9
THA.LOC104801929 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.1e-07 58.5 114 34.2
Thecc.02G145100 Theobroma cacao HOM05D010356 ORTHO05D000034 7.1e-07 58.5 92 33.7
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.3e-07 58.2 126 29.4
SHI37566 Sapria himalayana HOM05D000004 ORTHO05D000034 9.3e-07 58.2 113 28.3
THA.LOC104809701 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.3e-07 58.2 100 33.0
Ca_13571_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.2e-06 57.8 98 32.7
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 1.2e-06 57.8 98 33.7
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 1.2e-06 57.8 154 28.6
PSO017G4258 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-06 57.4 106 32.1
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.6e-06 57.4 108 33.3
Oeu029917.1 Olea europaea HOM05D000004 ORTHO05D000224 2.1e-06 57.0 100 32.0
PSO675G1144 Papaver somniferum HOM05D011124 ORTHO05D000034 2.1e-06 57.0 146 28.8
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 2.1e-06 57.0 108 33.3
TPR.G23420 Trifolium pratense HOM05D000004 ORTHO05D000034 2.1e-06 57.0 105 35.2
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.7e-06 56.6 96 32.3
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-06 56.6 96 31.2
Ca_25009_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.7e-06 56.6 98 31.6
PSO478G3134 Papaver somniferum HOM05D000004 ORTHO05D000224 2.7e-06 56.6 107 31.8
PSO832G2581 Papaver somniferum HOM05D000004 ORTHO05D000224 2.7e-06 56.6 107 29.9
RcHm_v2.0_Chr1g0329421 Rosa chinensis HOM05D000004 ORTHO05D000034 2.7e-06 56.6 160 26.9
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-06 56.2 106 32.1
MBI18_g37466_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 3.5e-06 56.2 100 34.0
Oeu055711.1 Olea europaea HOM05D008284 ORTHO05D000224 3.5e-06 56.2 92 38.0
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.5e-06 56.2 106 33.0
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.5e-06 56.2 106 33.0
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 4.6e-06 55.8 144 28.5
FvH4_6g23303 Fragaria vesca HOM05D000004 ORTHO05D000002 6.0e-06 55.5 99 36.4
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 6.0e-06 55.5 93 37.6
Manes.06G180001 Manihot esculenta HOM05D000004 ORTHO05D000034 6.0e-06 55.5 104 31.7
PSO210G0132 Papaver somniferum HOM05D000004 ORTHO05D000224 6.0e-06 55.5 167 26.9
PSO384G3945 Papaver somniferum HOM05D000004 ORTHO05D000224 6.0e-06 55.5 107 32.7
SHI54189 Sapria himalayana HOM05D000004 ORTHO05D000002 6.0e-06 55.5 105 32.4
Hund30387 Selenicereus undatus HOM05D008371 ORTHO05D000224 6.0e-06 55.5 107 30.8
VMungo1309G2370 Vigna mungo HOM05D000004 ORTHO05D000224 6.0e-06 55.5 127 31.5
CSS0046839 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.9e-06 55.1 207 28.0
Oeu050755.1 Olea europaea HOM05D008284 ORTHO05D000034 7.9e-06 55.1 92 35.9
PSO063G7351 Papaver somniferum HOM05D000004 ORTHO05D003797 7.9e-06 55.1 94 35.1
Rhsim11G0091100 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.9e-06 55.1 149 28.9
Hund28234 Selenicereus undatus HOM05D008371 ORTHO05D000224 7.9e-06 55.1 107 30.8
Hund30141 Selenicereus undatus HOM05D008371 ORTHO05D000224 7.9e-06 55.1 107 30.8
Hund30225 Selenicereus undatus HOM05D009385 ORTHO05D000224 7.9e-06 55.1 107 30.8
Hund30380 Selenicereus undatus HOM05D008371 ORTHO05D000224 7.9e-06 55.1 107 30.8
Hund30391 Selenicereus undatus HOM05D008371 ORTHO05D010888 7.9e-06 55.1 107 30.8
Hund30460 Selenicereus undatus HOM05D008371 ORTHO05D010888 7.9e-06 55.1 107 30.8
VMungo0720G0752 Vigna mungo HOM05D000004 ORTHO05D000224 7.9e-06 55.1 98 33.7


User provided reference genes

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