Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.3e-196 689.5 345 100.0
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 4.5e-152 541.6 363 74.7
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-148 529.6 380 70.3
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 4.9e-143 511.5 361 71.2
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 8.7e-140 500.7 337 73.9
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-138 496.5 339 72.3
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.4e-137 493.4 334 71.9
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 6.9e-137 491.1 340 72.1
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-134 483.8 335 69.9
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-134 481.5 337 69.7
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 9.3e-134 480.7 363 68.3
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 9.3e-134 480.7 335 70.1
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 2.3e-132 476.1 335 68.7
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.5e-131 472.6 351 68.9
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 2.5e-123 446.0 333 64.3
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 4.3e-123 445.3 329 66.3
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 4.8e-122 441.8 323 65.6
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-120 435.3 324 66.0
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.9e-118 429.9 332 65.4
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-109 400.6 334 58.7
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-109 399.8 329 60.8
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-96 357.5 262 65.6
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 1.1e-89 334.3 329 52.3
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.4e-89 334.0 329 54.4
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.4e-89 334.0 328 53.7
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 7.0e-89 331.6 324 54.6
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 1.2e-88 330.9 329 52.9
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.6e-88 330.5 328 54.0
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 1.6e-88 330.5 328 54.0
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 1.6e-88 330.5 329 54.1
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.0e-88 330.1 324 54.3
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 4.5e-88 328.9 329 53.5
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 5.9e-88 328.6 339 52.5
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 1.0e-87 327.8 329 51.4
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.3e-87 327.4 339 52.2
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.3e-87 327.4 329 51.4
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 5.0e-87 325.5 328 52.4
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 8.5e-87 324.7 339 52.2
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 1.5e-86 323.9 324 53.7
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 2.5e-86 323.2 324 53.4
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 4.2e-86 322.4 324 53.4
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 4.2e-86 322.4 330 52.1
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 7.2e-86 321.6 329 51.4
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 7.2e-86 321.6 329 52.6
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 1.6e-85 320.5 329 51.4
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 2.8e-85 319.7 328 53.0
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 2.8e-85 319.7 328 53.0
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.8e-85 319.7 329 52.3
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 3.6e-85 319.3 328 53.0
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 3.6e-85 319.3 328 53.0
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 3.6e-85 319.3 328 52.7
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 3.6e-85 319.3 328 53.7
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 4.7e-85 318.9 328 53.0
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 4.7e-85 318.9 328 51.5
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 4.7e-85 318.9 329 51.4
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 6.1e-85 318.5 328 51.2
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 8.0e-85 318.2 328 52.4
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 8.0e-85 318.2 329 52.6
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.0e-84 317.8 329 52.3
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 1.0e-84 317.8 328 53.4
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 1.0e-84 317.8 329 52.6
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.8e-84 317.0 316 51.9
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 2.3e-84 316.6 329 52.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 2.3e-84 316.6 329 51.4
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 4.0e-84 315.8 328 52.4
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 5.2e-84 315.5 329 52.9
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 6.8e-84 315.1 328 52.4
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 6.8e-84 315.1 328 51.2
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 8.8e-84 314.7 329 50.2
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 8.8e-84 314.7 328 50.3
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 8.8e-84 314.7 329 51.1
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.2e-83 314.3 329 50.2
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.5e-83 313.9 329 50.5
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 2.0e-83 313.5 329 49.8
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 2.0e-83 313.5 329 50.2
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 2.6e-83 313.2 329 50.5
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 2.6e-83 313.2 329 51.1
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 3.4e-83 312.8 328 50.3
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 4.4e-83 312.4 324 50.9
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 4.4e-83 312.4 329 50.8
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 4.4e-83 312.4 329 50.8
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 5.7e-83 312.0 328 50.9
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 7.5e-83 311.6 329 50.8
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 7.5e-83 311.6 329 51.1
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 9.8e-83 311.2 338 50.3
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.3e-82 310.8 329 50.5
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 2.2e-82 310.1 329 49.8
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.2e-82 310.1 344 48.8
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 2.2e-82 310.1 328 50.9
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 2.8e-82 309.7 328 51.2
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 2.8e-82 309.7 329 50.5
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 2.8e-82 309.7 328 50.9
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 3.7e-82 309.3 329 51.1
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 3.7e-82 309.3 328 50.9
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 6.3e-82 308.5 328 50.6
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 6.3e-82 308.5 329 51.1
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 8.3e-82 308.1 329 49.8
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 1.8e-81 307.0 325 50.8
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.8e-81 307.0 325 50.2
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 2.4e-81 306.6 328 50.3
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 4.1e-81 305.8 216 73.6
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 7.0e-81 305.1 328 50.3
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.6e-80 303.9 328 50.0
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.0e-80 303.5 328 50.6
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 2.7e-80 303.1 329 49.8
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.5e-80 302.4 347 47.8
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.0e-79 301.2 339 49.3
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 1.7e-79 300.4 329 50.5
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 2.3e-79 300.1 320 50.0
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 6.6e-79 298.5 360 47.5
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 6.6e-79 298.5 360 47.8
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 8.6e-79 298.1 329 46.2
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 1.5e-78 297.4 330 48.8
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 8.0e-77 291.6 329 48.3
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 1.4e-76 290.8 348 47.7
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 6.8e-76 288.5 324 49.4
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 8.9e-76 288.1 341 45.2
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 9.8e-75 284.6 417 42.0
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 8.3e-74 281.6 339 47.2
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 3.2e-73 279.6 315 48.3
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 3.3e-70 269.6 328 46.3
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 7.3e-70 268.5 324 44.1
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 9.5e-70 268.1 281 49.5
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 3.1e-68 263.1 196 63.3
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.9e-65 253.8 343 43.1
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-63 247.3 181 62.4
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.0e-63 246.5 275 49.5
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 3.0e-63 246.5 271 48.3
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 3.3e-62 243.0 338 42.9
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.4e-59 232.6 184 71.2
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.1e-56 223.8 337 43.0
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 7.8e-56 221.9 221 51.6
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.1e-54 218.0 213 53.1
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 5.6e-54 215.7 217 51.2
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 4.6e-48 196.1 218 49.1
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.4e-33 147.9 179 46.4
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 4.2e-33 146.4 147 51.7
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 6.7e-31 139.0 142 51.4
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.8e-29 133.7 149 49.7
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 2.8e-29 133.7 174 47.1
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 7.9e-24 115.5 366 29.2
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-23 115.2 98 56.1
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 1.8e-23 114.4 122 48.4
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 1.1e-22 111.7 222 34.2
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.0e-20 103.2 359 28.7
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 1.7e-18 97.8 358 27.1
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 2.5e-17 94.0 165 36.4
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 4.2e-17 93.2 135 42.2
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.6e-16 91.3 323 28.5
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 7.9e-16 89.0 93 47.3
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.1e-12 76.6 361 25.2
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 2.0e-11 74.3 118 40.7
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.4e-09 68.2 69 49.3
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 4.2e-09 66.6 52 61.5
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 7.2e-09 65.9 313 27.2
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.4e-07 61.6 43 67.4
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.3e-07 60.8 48 60.4
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 3.0e-07 60.5 49 51.0
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 3.0e-07 60.5 65 43.1
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 5.1e-07 59.7 52 57.7
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 3.3e-06 57.0 78 38.5
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 5.7e-06 56.2 46 58.7


User provided reference genes

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