Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g34711_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D028538 5.3e-116 421.0 210 100.0
MD05G1229800 Malus domestica HOM05D000181 ORTHO05D007068 4.5e-30 135.6 140 54.3
TAR627G0133 Trochodendron aralioides HOM05D000181 ORTHO05D007068 5.8e-30 135.2 143 51.7
Nn7g38234 Nelumbo nucifera HOM05D000181 ORTHO05D007068 2.5e-28 129.8 105 57.1
Dinv42476 Davidia involucrata HOM05D000181 ORTHO05D007068 7.1e-28 128.3 140 50.7
CSS0042976 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007068 9.3e-28 127.9 107 57.9
Potri.010G171300 Populus trichocarpa HOM05D000181 ORTHO05D007068 2.3e-26 123.2 143 46.9
Aqoxy1G01434 Aquilegia oxysepala HOM05D000181 ORTHO05D007068 3.0e-26 122.9 104 52.9
MD10G1209600 Malus domestica HOM05D000181 ORTHO05D028538 3.0e-26 122.9 157 47.1
Prupe.4G132700 Prunus persica HOM05D000181 ORTHO05D007068 1.9e-25 120.2 141 48.2
Manes.06G176300 Manihot esculenta HOM05D000181 ORTHO05D007068 4.3e-25 119.0 140 45.7
Haze_07800 Corylus avellana HOM05D000181 ORTHO05D007068 5.7e-25 118.6 138 44.2
QL04p087205 Quercus lobata HOM05D000181 ORTHO05D007068 8.2e-24 114.8 139 46.0
GSVIVG01036763001 Vitis vinifera HOM05D000181 ORTHO05D007068 1.8e-23 113.6 156 44.9
Sabra10G0130900 Salix brachista HOM05D000181 ORTHO05D007068 9.0e-23 111.3 136 44.1
Ciclev10004242m.g Citrus clementina HOM05D000181 ORTHO05D007068 3.4e-22 109.4 138 48.6
C06p29810 Brassica napus HOM05D000181 ORTHO05D007068 7.7e-22 108.2 144 42.4
BolC6t38142H Brassica oleracea HOM05D000181 ORTHO05D007068 7.7e-22 108.2 144 42.4
TWI38G0335 Tripterygium wilfordii HOM05D000181 ORTHO05D007068 7.7e-22 108.2 140 42.9
A07p27070 Brassica napus HOM05D000181 ORTHO05D007068 1.3e-21 107.5 144 42.4
Actinidia37132 Actinidia chinensis HOM05D000181 ORTHO05D007068 8.5e-21 104.8 132 43.2
FAN21G2082 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.1e-20 104.4 138 45.7
Duzib213G0016 Durio zibethinus HOM05D000181 ORTHO05D007068 1.4e-20 104.0 133 42.9
RcHm_v2.0_Chr5g0024281 Rosa chinensis HOM05D000181 ORTHO05D007068 3.2e-20 102.8 138 40.6
BcaB02g07224 Brassica carinata HOM05D000181 ORTHO05D007068 4.2e-20 102.4 144 41.0
THA.LOC104812371 Tarenaya hassleriana HOM05D000181 ORTHO05D007068 4.2e-20 102.4 143 40.6
COL.COLO4_19749 Corchorus olitorius HOM05D000181 ORTHO05D007068 5.5e-20 102.1 134 41.0
Thecc.07G182000 Theobroma cacao HOM05D000181 ORTHO05D007068 5.5e-20 102.1 135 45.2
FvH4_3g14760 Fragaria vesca HOM05D000181 ORTHO05D007068 7.2e-20 101.7 138 42.8
Gohir.D13G128800 Gossypium hirsutum HOM05D000181 ORTHO05D007068 7.2e-20 101.7 130 44.6
FAN11G1148 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.2e-19 100.9 138 43.5
FAN16G1891 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.6e-19 100.5 138 44.9
FAN25G2563 Fragaria x ananassa HOM05D000181 ORTHO05D007068 2.1e-19 100.1 138 42.8
Gorai.013G144900 Gossypium raimondii HOM05D000181 ORTHO05D007068 2.7e-19 99.8 133 44.4
Sp5g34620 Schrenkiella parvula HOM05D000181 ORTHO05D007068 2.7e-19 99.8 144 39.6
AUR62040741 Chenopodium quinoa HOM05D000181 ORTHO05D007068 4.6e-19 99.0 115 46.1
Sed0005173 Sechium edule HOM05D000181 ORTHO05D007068 4.6e-19 99.0 140 38.6
PSO675G5464 Papaver somniferum HOM05D000181 ORTHO05D007068 6.1e-19 98.6 110 45.5
AUR62032086 Chenopodium quinoa HOM05D000181 ORTHO05D007068 7.9e-19 98.2 115 47.0
AUR62041059 Chenopodium quinoa HOM05D000181 ORTHO05D007068 7.9e-19 98.2 105 48.6
Ah.16g106100 Amaranthus hybridus HOM05D000181 ORTHO05D007068 1.0e-18 97.8 140 41.4
CANSAT80G1988 Cannabis sativa HOM05D000181 ORTHO05D007068 1.0e-18 97.8 133 44.4
Thhalv10018071m.g Eutrema salsugineum HOM05D000181 ORTHO05D007068 1.0e-18 97.8 144 39.6
ATR0752G106 Amborella trichopoda HOM05D000181 ORTHO05D007068 1.8e-18 97.1 121 39.7
CARHR073220 Cardamine hirsuta HOM05D000181 ORTHO05D007068 1.8e-18 97.1 144 40.3
BraA07t30351Z Brassica rapa HOM05D000181 ORTHO05D007068 3.9e-18 95.9 143 38.5
Oeu034062.1 Olea europaea HOM05D000181 ORTHO05D007068 5.1e-18 95.5 111 41.4
DCAR_013723 Daucus carota HOM05D000181 ORTHO05D007068 8.8e-18 94.7 142 36.6
Sopen02g023810 Solanum pennellii HOM05D000181 ORTHO05D007068 1.1e-17 94.4 122 39.3
SGA_v2.0_scaffold7G03612 Striga asiatica HOM05D000181 ORTHO05D007068 1.1e-17 94.4 123 36.6
Migut.M01524 Erythranthe guttata HOM05D000181 ORTHO05D007068 3.3e-17 92.8 123 39.0
Aa31LG4G1430 Aethionema arabicum HOM05D000181 ORTHO05D007068 7.4e-17 91.7 154 36.4
AT1G79560 Arabidopsis thaliana HOM05D000181 ORTHO05D007068 7.4e-17 91.7 144 38.9
Solyc02g079000.4 Solanum lycopersicum HOM05D000181 ORTHO05D007068 7.4e-17 91.7 122 40.2
ClCG02G018660 Citrullus lanatus HOM05D000181 ORTHO05D007068 9.7e-17 91.3 130 38.5
Lalb_Chr01g0007221 Lupinus albus HOM05D000181 ORTHO05D007068 9.7e-17 91.3 134 44.0
MSTRG.7078 Avicennia marina HOM05D000181 ORTHO05D007068 1.3e-16 90.9 114 43.0
Sc10g0005160 Simmondsia chinensis HOM05D000181 ORTHO05D007068 1.3e-16 90.9 121 42.1
Eucgr.F04462 Eucalyptus grandis HOM05D000181 ORTHO05D007068 1.7e-16 90.5 141 40.4
RcHm_v2.0_Chr5g0060561 Rosa chinensis HOM05D000181 ORTHO05D007068 1.7e-16 90.5 74 55.4
arahy.Tifrunner.gnm1.ann1.HBHB6G Arachis hypogaea HOM05D000181 ORTHO05D007068 2.8e-16 89.7 146 43.2
arahy.Tifrunner.gnm1.ann1.1IB7AW Arachis hypogaea HOM05D000181 ORTHO05D007068 3.7e-16 89.4 146 43.2
PSO675G4612 Papaver somniferum HOM05D000181 ORTHO05D007068 3.7e-16 89.4 135 37.8
Cpa.g.sc32.40 Carica papaya HOM05D000181 ORTHO05D028538 8.2e-16 88.2 140 37.9
unitig_748.g7620 Utricularia gibba HOM05D000181 ORTHO05D007068 1.1e-15 87.8 131 39.7
Nitab4.5_0006529g0020 Nicotiana tabacum HOM05D000181 ORTHO05D007068 9.1e-15 84.7 83 44.6
VMungo1127G0531 Vigna mungo HOM05D000002 ORTHO05D007068 1.2e-14 84.3 141 40.4
AL2G40200 Arabidopsis lyrata HOM05D000181 ORTHO05D007068 1.5e-14 84.0 144 38.2
Lj2C14G7 Lonicera japonica HOM05D000181 ORTHO05D007068 2.0e-14 83.6 111 42.3
PGR031G2481 Punica granatum HOM05D000181 ORTHO05D007068 2.0e-14 83.6 139 36.7
EL10Ac2g03239 Beta vulgaris HOM05D000181 ORTHO05D007068 5.9e-14 82.0 105 44.8
Carub.0002s2642 Capsella rubella HOM05D000181 ORTHO05D007068 1.3e-13 80.9 143 35.7
CAN.G891.3 Capsicum annuum HOM05D000181 ORTHO05D007068 1.3e-13 80.9 80 43.8
MELO3C019635.2 Cucumis melo HOM05D000181 ORTHO05D007068 1.3e-13 80.9 139 35.3
Nitab4.5_0000388g0100 Nicotiana tabacum HOM05D000181 ORTHO05D007068 2.9e-13 79.7 139 35.3
HPP92_000847 Vanilla planifolia HOM05D000181 ORTHO05D007068 2.9e-13 79.7 127 37.8
Lj3g0011719 Lotus japonicus HOM05D000181 ORTHO05D007068 6.5e-13 78.6 144 41.0
HanXRQChr03g0078201 Helianthus annuus HOM05D000181 ORTHO05D007068 8.5e-13 78.2 121 38.8
Phvul.011G177500 Phaseolus vulgaris HOM05D000181 ORTHO05D007068 8.5e-13 78.2 125 42.4
Glyma.08G237500 Glycine max HOM05D000181 ORTHO05D007068 1.9e-12 77.0 140 42.1
Lsat_1_v5_gn_7_69480 Lactuca sativa HOM05D000181 ORTHO05D007068 1.9e-12 77.0 121 41.3
Medtr8g056860 Medicago truncatula HOM05D000181 ORTHO05D007068 1.9e-12 77.0 130 40.8
TPR.G9423 Trifolium pratense HOM05D000181 ORTHO05D007068 3.2e-12 76.3 144 41.0
Ca_25910_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007068 7.2e-12 75.1 141 41.1
CsaV3_6G013510 Cucumis sativus L. HOM05D000181 ORTHO05D007068 1.6e-11 73.9 134 36.6
Psat4g137600 Pisum sativum HOM05D000181 ORTHO05D007068 6.7e-10 68.6 138 35.5
Oeu044451.1 Olea europaea HOM05D000181 ORTHO05D007068 2.6e-09 66.6 80 40.0
SEGI_28435 Sequoiadendron giganteum HOM05D000181 ORTHO05D007068 7.4e-09 65.1 99 35.4
QL04p070625 Quercus lobata HOM05D000181 ORTHO05D028538 9.1e-07 58.2 90 42.2
PSO675G7110 Papaver somniferum HOM05D000181 ORTHO05D007068 4.5e-06 55.8 54 48.1


User provided reference genes

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