Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g17005_MAGBIO Magnolia biondii HOM05D007576 ORTHO05D009576 0.0e+00 1590.1 820 100.0
Nn1g06600 Nelumbo nucifera HOM05D007576 ORTHO05D009576 2.9e-165 586.6 842 47.0
Aqoxy1G02531 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 9.9e-150 535.0 845 44.0
Aqoxy1G02534 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 9.9e-150 535.0 845 44.0
PSO675G5421 Papaver somniferum HOM05D007576 ORTHO05D009576 1.3e-149 534.6 860 43.3
Dinv07540 Davidia involucrata HOM05D007576 ORTHO05D009576 1.9e-145 520.8 814 43.9
Cfa000420 Carpinus fangiana HOM05D007576 ORTHO05D009576 9.6e-145 518.5 833 41.7
Potri.011G050600 Populus trichocarpa HOM05D007576 ORTHO05D009576 1.6e-144 517.7 810 43.7
CSS0005805 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 3.5e-139 500.0 837 41.3
Sabra11G0034500 Salix brachista HOM05D007576 ORTHO05D009576 3.9e-138 496.5 823 43.0
QL05p039732 Quercus lobata HOM05D007576 ORTHO05D009576 1.6e-136 491.1 838 40.1
CiPaw.09G057800 Carya illinoinensis HOM05D007576 ORTHO05D009576 3.7e-136 490.0 845 40.7
FAN21G0504 Fragaria x ananassa HOM05D007576 ORTHO05D009576 6.2e-136 489.2 842 41.3
FAN16G1901 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.4e-135 488.0 845 41.3
Manes.17G043700 Manihot esculenta HOM05D007576 ORTHO05D009576 4.0e-135 486.5 845 41.2
Thecc.06G190300 Theobroma cacao HOM05D007576 ORTHO05D009576 6.9e-135 485.7 835 41.1
Duzib192G1068 Durio zibethinus HOM05D007576 ORTHO05D009576 1.2e-134 485.0 837 40.9
FAN25G3788 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.5e-134 484.6 843 41.0
TWI38G1553 Tripterygium wilfordii HOM05D007576 ORTHO05D009576 2.0e-134 484.2 841 41.3
MD05G1314800 Malus domestica HOM05D007576 ORTHO05D009576 9.9e-134 481.9 834 41.4
FAN11G2000 Fragaria x ananassa HOM05D007576 ORTHO05D009576 3.8e-133 479.9 845 40.8
RhsimUnG0044800 Rhododendron simsii HOM05D007576 ORTHO05D009576 4.9e-133 479.6 833 41.9
FvH4_3g04910 Fragaria vesca HOM05D007576 ORTHO05D009576 1.4e-132 478.0 844 40.9
COL.COLO4_31497 Corchorus olitorius HOM05D007576 ORTHO05D009576 1.2e-131 474.9 840 39.6
MD10G1296200 Malus domestica HOM05D007576 ORTHO05D009576 4.6e-131 473.0 834 41.0
Cpa.g.sc1598.2 Carica papaya HOM05D007576 ORTHO05D009576 1.0e-130 471.9 809 39.7
RcHm_v2.0_Chr5g0008071 Rosa chinensis HOM05D007576 ORTHO05D009576 5.1e-130 469.5 842 39.9
Ciclev10014397m.g Citrus clementina HOM05D007576 ORTHO05D009576 3.7e-128 463.4 813 41.3
Lj1A1207T83 Lonicera japonica HOM05D007576 ORTHO05D009576 1.3e-125 454.9 822 40.6
CANSAT35G0220 Cannabis sativa HOM05D007576 ORTHO05D009576 1.4e-124 451.4 840 39.5
ClCG01G022850 Citrullus lanatus HOM05D007576 ORTHO05D009576 2.5e-124 450.7 790 42.0
Hund21235 Selenicereus undatus HOM05D007576 ORTHO05D009576 2.7e-123 447.2 788 40.2
MELO3C007295.2 Cucumis melo HOM05D007576 ORTHO05D009576 4.6e-123 446.4 838 39.4
Nitab4.5_0009493g0040 Nicotiana tabacum HOM05D007576 ORTHO05D009576 4.6e-123 446.4 829 39.8
Gorai.010G153000 Gossypium raimondii HOM05D007576 ORTHO05D009576 1.8e-122 444.5 832 38.8
Eucgr.E03347 Eucalyptus grandis HOM05D007576 ORTHO05D009576 3.9e-122 443.4 832 38.0
Sed0017500 Sechium edule HOM05D007576 ORTHO05D009576 3.9e-122 443.4 773 40.8
Gohir.A06G126300 Gossypium hirsutum HOM05D007576 ORTHO05D009576 8.7e-122 442.2 841 38.4
Gohir.D06G131100 Gossypium hirsutum HOM05D007576 ORTHO05D009576 1.9e-121 441.0 838 38.5
CsaV3_6G050020 Cucumis sativus L. HOM05D007576 ORTHO05D009576 2.5e-121 440.7 792 39.5
Lalb_Chr13g0302021 Lupinus albus HOM05D007576 ORTHO05D009576 2.5e-121 440.7 814 38.6
Medtr4g113740 Medicago truncatula HOM05D007576 ORTHO05D009576 1.3e-120 438.3 832 37.9
Glyma.05G009500 Glycine max HOM05D007576 ORTHO05D009576 2.2e-120 437.6 798 39.5
Nitab4.5_0001357g0010 Nicotiana tabacum HOM05D007576 ORTHO05D009576 3.1e-119 433.7 838 39.0
Glyma.17G117500 Glycine max HOM05D007576 ORTHO05D009576 5.3e-119 433.0 787 38.9
Sc05g0007790 Simmondsia chinensis HOM05D007576 ORTHO05D009576 5.3e-119 433.0 807 39.3
Ca_21702_v3 Cicer arietinum L. HOM05D007576 ORTHO05D009576 9.0e-119 432.2 779 39.2
Psat4g041840 Pisum sativum HOM05D007576 ORTHO05D009576 1.2e-118 431.8 777 39.3
AUR62016989 Chenopodium quinoa HOM05D007576 ORTHO05D009576 2.2e-117 427.6 789 39.2
PGSC0003DMG400022439 Solanum tuberosum HOM05D007576 ORTHO05D009576 2.2e-117 427.6 834 39.2
MSTRG.15916 Avicennia marina HOM05D007576 ORTHO05D009576 6.5e-117 426.0 774 38.8
Prupe.4G044400 Prunus persica HOM05D007576 ORTHO05D009576 1.9e-116 424.5 832 38.8
AUR62014798 Chenopodium quinoa HOM05D007576 ORTHO05D009576 4.2e-116 423.3 782 39.6
Phvul.003G161900 Phaseolus vulgaris HOM05D007576 ORTHO05D009576 6.1e-115 419.5 787 37.7
VMungo1215G0476 Vigna mungo HOM05D007576 ORTHO05D009576 6.1e-115 419.5 830 37.8
HPP92_014806 Vanilla planifolia HOM05D007576 ORTHO05D009576 1.8e-114 417.9 832 38.3
CAN.G1164.10 Capsicum annuum HOM05D007576 ORTHO05D009576 2.3e-114 417.5 836 38.9
Lj4g0015142 Lotus japonicus HOM05D007576 ORTHO05D009576 3.0e-114 417.2 800 38.0
arahy.Tifrunner.gnm1.ann1.TJT9YV Arachis hypogaea HOM05D007576 ORTHO05D009576 3.9e-114 416.8 818 38.9
arahy.Tifrunner.gnm1.ann1.TJX0PA Arachis hypogaea HOM05D007576 ORTHO05D009576 3.9e-114 416.8 781 39.8
DCAR_008044 Daucus carota HOM05D007576 ORTHO05D009576 1.7e-112 411.4 750 39.6
Sopen02g023320 Solanum pennellii HOM05D007576 ORTHO05D009576 1.7e-112 411.4 805 39.6
EL10Ac8g20358 Beta vulgaris HOM05D007576 ORTHO05D009576 6.9e-111 406.0 792 37.6
Lsat_1_v5_gn_4_52541 Lactuca sativa HOM05D007576 ORTHO05D009576 7.7e-110 402.5 805 36.4
SalBow8G3709 Salvia bowleyana HOM05D007576 ORTHO05D009576 1.4e-108 398.3 806 37.6
Cc02_g13130 Coffea canephora HOM05D007576 ORTHO05D009576 1.2e-107 395.2 765 38.4
Migut.M01192 Erythranthe guttata HOM05D007576 ORTHO05D009576 1.2e-107 395.2 790 36.7
SGA_v2.0_scaffold7G03972 Striga asiatica HOM05D007576 ORTHO05D009576 2.3e-106 391.0 837 37.2
Ah.14g089350 Amaranthus hybridus HOM05D007576 ORTHO05D009576 2.8e-104 384.0 786 37.8
PSO541G6317 Papaver somniferum HOM05D007576 ORTHO05D009576 2.0e-102 377.9 538 47.2
Haze_06496 Corylus avellana HOM05D007576 ORTHO05D009576 7.7e-102 375.9 741 37.1
HanXRQChr16g0518181 Helianthus annuus HOM05D007576 ORTHO05D009576 5.0e-101 373.2 794 37.0
Peaxi162Scf00947g00422 Petunia axillaris HOM05D007576 ORTHO05D009576 4.2e-100 370.2 665 40.9
PGR042G0577 Punica granatum HOM05D007576 ORTHO05D009576 6.7e-98 362.8 838 35.6
CDE01G0107 Ceratophyllum demersum HOM05D007576 ORTHO05D009576 1.4e-95 355.1 678 38.1
ECA234G2395 Erigeron canadensis HOM05D007576 ORTHO05D009576 5.3e-95 353.2 809 35.8
GSVIVG01002036001 Vitis vinifera HOM05D007576 ORTHO05D009576 2.1e-91 341.3 311 62.1
CSS0010553 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 8.3e-88 329.3 795 34.8
TPR.G10703 Trifolium pratense HOM05D007576 ORTHO05D009576 8.3e-88 329.3 281 63.0
ATR0680G038 Amborella trichopoda HOM05D007576 ORTHO05D009576 5.0e-85 320.1 439 44.6
Zm00001eb229030 Zea mays HOM05D007576 ORTHO05D009576 1.9e-84 318.2 263 64.3
Os06g0731700 Oryza sativa ssp. japonica HOM05D007576 ORTHO05D009576 2.5e-84 317.8 257 62.3
Oeu038219.1 Olea europaea HOM05D007576 ORTHO05D009576 1.7e-80 305.1 241 66.8
Atru.chr10.1919 Acer truncatum HOM05D007576 ORTHO05D009576 1.3e-69 268.9 623 36.4
Ciclev10008775m.g Citrus clementina HOM05D007576 ORTHO05D009576 1.6e-62 245.4 304 49.7
Pp3c11_25570 Physcomitrium patens HOM05D007576 ORTHO05D009576 5.8e-57 226.9 253 50.2
Mapoly0181s0007 Marchantia polymorpha HOM05D007576 ORTHO05D009576 2.1e-54 218.4 336 40.2
Duzib235G0673 Durio zibethinus HOM05D007576 ORTHO05D009576 1.5e-41 175.6 158 60.1
Ciclev10009735m.g Citrus clementina HOM05D007576 ORTHO05D009576 9.9e-41 172.9 156 59.0
Solyc02g078470.4 Solanum lycopersicum HOM05D007576 ORTHO05D009576 7.3e-28 130.2 100 65.0
CBR_g49326 Chara braunii HOM05D007576 ORTHO05D000002 2.1e-27 128.6 190 38.4
Lj2g0021670 Lotus japonicus HOM05D007576 ORTHO05D009576 3.9e-21 107.8 121 52.9
SEGI_32076 Sequoiadendron giganteum HOM05D007576 ORTHO05D009576 1.3e-19 102.8 87 57.5
Atru.chr10.1928 Acer truncatum HOM05D007576 ORTHO05D009576 2.0e-17 95.5 100 58.0
ECA247G2871 Erigeron canadensis HOM05D000526 ORTHO05D000956 4.9e-16 90.9 80 57.5
Cre13.g589167 Chlamydomonas reinhardtii HOM05D007576 ORTHO05D009576 4.8e-11 74.3 247 27.5
MCO14G177 Micromonas commoda HOM05D004623 ORTHO05D005100 1.7e-08 65.9 138 34.1


User provided reference genes

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