Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g14311_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 1.2e-109 399.8 205 100.0
MBI18_g40698_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 5.0e-42 175.3 93 92.5
MBI08_g26490_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D036564 1.6e-16 90.5 70 62.9
MBI18_g40699_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 1.6e-11 73.9 106 48.1
Rhsim02G0024000 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.9e-11 72.0 131 38.9
CSS0011571 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-10 70.5 99 41.4
TWI32G0910 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.9e-10 69.7 99 42.4
MBI11_g02484_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 6.6e-10 68.6 78 46.2
CSS0004631 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.6e-10 68.2 151 33.1
CSS0049161 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-09 67.8 99 40.4
CSS0043413 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-09 67.0 99 40.4
CSS0008496 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-09 66.2 99 40.4
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 5.6e-09 65.5 124 37.9
CSS0044374 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D014307 7.3e-09 65.1 108 40.7
Atru.chr8.135 Acer truncatum HOM05D000004 ORTHO05D000002 3.6e-08 62.8 94 39.4
CSS0023637 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-08 62.8 99 39.4
EL10Ac6g14457 Beta vulgaris HOM05D000004 ORTHO05D000002 4.7e-08 62.4 98 42.9
CSS0022143 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-08 62.4 96 39.6
MBI16_g31131_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 4.7e-08 62.4 77 42.9
Atru.chr6.117 Acer truncatum HOM05D000004 ORTHO05D000002 6.1e-08 62.0 73 50.7
BcaC05g27996 Brassica carinata HOM05D000004 ORTHO05D000002 2.3e-07 60.1 92 44.6
FvH4_4g12741 Fragaria vesca HOM05D000004 ORTHO05D000002 6.8e-07 58.5 104 36.5
FvH4_5g25851 Fragaria vesca HOM05D000004 ORTHO05D000002 6.8e-07 58.5 93 41.9
RcHm_v2.0_Chr7g0229301 Rosa chinensis HOM05D000004 ORTHO05D000002 6.8e-07 58.5 97 40.2
FvH4_4g14287 Fragaria vesca HOM05D000004 ORTHO05D000002 8.9e-07 58.2 93 41.9
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 8.9e-07 58.2 99 37.4
SEGI_34349 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.2e-06 57.8 61 50.8
MBI16_g33520_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 1.5e-06 57.4 42 69.0
EL10Ac4g09853 Beta vulgaris HOM05D000004 ORTHO05D000002 2.0e-06 57.0 60 51.7
RcHm_v2.0_Chr3g0461871 Rosa chinensis HOM05D000004 ORTHO05D000002 2.0e-06 57.0 99 39.4
CSS0034640 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-06 56.6 93 38.7
CSS0023711 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-06 56.2 89 38.2
SEGI_07278 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.4e-06 56.2 80 42.5
BcaC03g16674 Brassica carinata HOM05D000004 ORTHO05D000002 4.4e-06 55.8 93 39.8
MBI05_g33752_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D244881 4.4e-06 55.8 85 41.2
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 5.7e-06 55.5 94 38.3
QL04p050706 Quercus lobata HOM05D000059 ORTHO05D009759 7.5e-06 55.1 81 46.9


User provided reference genes

Program Settings