Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.4e-66 256.1 131 100.0
MBI02_g25781_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 4.3e-23 111.7 124 54.8
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 7.6e-20 100.9 124 44.4
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 9.3e-18 94.0 107 47.7
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.7e-17 92.4 120 48.3
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 7.9e-17 90.9 139 45.3
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.0e-16 90.5 112 48.2
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.3e-16 90.1 119 47.9
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.3e-16 89.4 135 43.7
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.1e-15 87.0 128 46.1
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.1e-15 87.0 135 42.2
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.9e-15 86.3 135 43.0
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 2.5e-15 85.9 118 46.6
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 5.7e-15 84.7 118 43.2
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.3e-14 83.6 130 42.3
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.6e-14 83.2 127 41.7
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.8e-14 82.4 130 41.5
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 4.8e-14 81.6 117 45.3
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 3.1e-13 79.0 127 42.5
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 4.1e-13 78.6 121 43.0
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 4.1e-13 78.6 123 43.1
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 6.9e-13 77.8 136 36.0
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 9.0e-13 77.4 135 40.7
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.5e-12 76.6 122 43.4
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.0e-12 76.3 127 40.9
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 2.6e-12 75.9 119 44.5
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.6e-12 75.9 132 41.7
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 4.5e-12 75.1 129 42.6
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 4.5e-12 75.1 126 41.3
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 7.6e-12 74.3 105 44.8
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 1.0e-11 73.9 114 44.7
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 1.0e-11 73.9 125 36.8
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.7e-11 73.2 130 40.8
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 1.7e-11 73.2 133 37.6
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.2e-11 72.8 122 39.3
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 2.2e-11 72.8 122 38.5
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.8e-11 72.0 122 40.2
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 3.8e-11 72.0 122 37.7
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 5.0e-11 71.6 112 43.8
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 6.5e-11 71.2 132 37.9
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 6.5e-11 71.2 112 45.5
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 8.4e-11 70.9 130 40.0
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.4e-10 70.1 130 41.5
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 1.4e-10 70.1 130 42.3
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.4e-10 70.1 135 36.3
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.9e-10 69.7 117 42.7
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.5e-10 69.3 122 37.7
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 2.5e-10 69.3 120 40.8
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 2.5e-10 69.3 111 42.3
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 3.2e-10 68.9 125 40.8
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.2e-10 68.6 132 37.9
ATR0165G002 Amborella trichopoda HOM05D005932 ORTHO05D006213 5.5e-10 68.2 102 44.1
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 7.2e-10 67.8 110 43.6
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 7.2e-10 67.8 123 41.5
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 9.3e-10 67.4 124 40.3
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.2e-09 67.0 107 42.1
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.6e-09 66.6 119 40.3
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.1e-09 66.2 124 41.9
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 3.5e-09 65.5 112 39.3
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 3.5e-09 65.5 122 36.9
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.6e-09 65.1 124 39.5
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 6.1e-09 64.7 117 37.6
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 7.9e-09 64.3 111 41.4
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 1.0e-08 63.9 116 41.4
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 1.0e-08 63.9 126 39.7
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.0e-08 63.9 118 37.3
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.3e-08 63.5 116 43.1
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.3e-08 63.5 129 36.4
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.3e-08 63.5 132 37.9
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.8e-08 63.2 114 39.5
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.8e-08 63.2 126 38.1
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 2.3e-08 62.8 110 46.4
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.3e-08 62.8 116 39.7
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 2.3e-08 62.8 104 37.5
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 3.9e-08 62.0 122 36.9
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 3.9e-08 62.0 119 38.7
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 5.1e-08 61.6 123 38.2
CDE12G0274 Ceratophyllum demersum HOM05D000474 ORTHO05D008385 6.7e-08 61.2 90 45.6
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 8.7e-08 60.8 125 32.8
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.1e-07 60.5 128 36.7
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.1e-07 60.5 111 37.8
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.5e-07 60.1 120 32.5
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 4.3e-07 58.5 121 33.9
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 7.4e-07 57.8 109 38.5
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 9.7e-07 57.4 127 38.6
FAN25G3656 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.8e-06 55.8 130 36.2
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 4.8e-06 55.1 126 34.9
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 6.3e-06 54.7 133 35.3
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 8.2e-06 54.3 109 34.9


User provided reference genes

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