Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g10367_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.4e-72 276.2 136 100.0
MBI12_g01748_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.4e-10 68.6 56 55.4
PSO063G7011 Papaver somniferum HOM05D000003 ORTHO05D000004 9.7e-10 67.4 56 58.9
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-09 65.9 67 49.3
TWI36G1780 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.8e-09 65.9 70 47.1
MBI08_g41670_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.7e-09 65.5 67 56.7
MBI09_g09410_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.4e-08 63.5 56 51.8
MBI06_g21007_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.8e-08 63.2 57 57.9
CSS0031199 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-08 62.8 56 50.0
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.4e-08 62.8 67 47.8
MBI08_g39703_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.1e-08 62.0 66 53.0
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-08 62.0 58 48.3
Atru.chr12.1754 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-08 61.2 82 37.8
CSS0025021 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D002963 7.0e-08 61.2 64 48.4
MBI14_g42848_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.1e-08 60.8 50 60.0
MBI19_g17590_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.1e-08 60.8 57 54.4
Aqoxy1G01793 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.2e-07 60.5 69 49.3
QL08p057946 Quercus lobata HOM05D000269 ORTHO05D005780 1.2e-07 60.5 97 36.1
MBI14_g43801_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.5e-07 60.1 54 55.6
QL04p049443 Quercus lobata HOM05D000279 ORTHO05D000957 1.5e-07 60.1 59 49.2
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-07 59.7 57 52.6
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-07 59.7 57 52.6
MBI17_g26528_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.0e-07 59.7 80 45.0
MBI17_g44419_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.6e-07 59.3 80 45.0
Medtr6g091930 Medicago truncatula HOM05D003169 ORTHO05D003700 2.6e-07 59.3 52 53.8
Aa31LG8G10200 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.4e-07 58.9 65 47.7
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-07 58.9 75 41.3
CSS0024939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-07 58.9 84 36.9
MBI04_g20350_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.4e-07 58.9 54 55.6
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-07 58.5 57 50.9
MBI12_g32343_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.5e-07 58.5 54 57.4
Atru.chr2.253 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-07 58.2 64 43.8
Atru.chr3.1277 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-07 58.2 57 47.4
Atru.chr4.1941 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-07 58.2 57 49.1
CSS0050470 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.9e-07 58.2 56 51.8
Sopen01g037960 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-07 58.2 47 57.4
Aa31LG4G9750 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.7e-07 57.8 67 46.3
Aqoxy3G01491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.7e-07 57.8 50 58.0
Aqoxy7G02499 Aquilegia oxysepala HOM05D012730 ORTHO05D000004 7.7e-07 57.8 56 50.0
MBI02_g45027_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.7e-07 57.8 51 54.9
MBI06_g15030_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.7e-07 57.8 66 47.0
MBI19_g19123_MAGBIO Magnolia biondii HOM05D005108 ORTHO05D006171 7.7e-07 57.8 72 44.4
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.7e-07 57.8 48 60.4
Atru.chr2.258 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 56 46.4
Atru.chr3.3444 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 56 46.4
Aa31LG10G9940 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 57 45.6
Aqoxy4G01140 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.0e-06 57.4 51 51.0
CSS0026355 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-06 57.4 55 56.4
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 1.0e-06 57.4 56 55.4
Psat0s3218g0040 Pisum sativum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 57 50.9
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 1.0e-06 57.4 64 43.8
Aqoxy1G02399 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-06 57.0 48 56.2
Aqoxy1G03218 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-06 57.0 65 47.7
arahy.Tifrunner.gnm1.ann1.K9ADIX Arachis hypogaea HOM05D000003 ORTHO05D000004 1.3e-06 57.0 65 40.0
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-06 57.0 56 46.4
ECA247G2034 Erigeron canadensis HOM05D000003 ORTHO05D000006 1.3e-06 57.0 77 40.3
PSO782G0247 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 48 58.3
THA.LOC104817082 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.3e-06 57.0 57 49.1
Atru.chr11.756 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 57 45.6
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 56 48.2
Aqoxy2G01936 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.6 57 42.1
Aqoxy4G01518 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.6 57 43.9
Aqoxy5G02498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.6 50 50.0
Aqoxy6G01770 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.6 57 45.6
CSS0016554 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-06 56.6 65 43.1
MBI17_g31746_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.7e-06 56.6 85 42.4
TAR549G0007 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.7e-06 56.6 57 45.6
Atru.chr1.2846 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 56.2 56 48.2
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 56.2 56 44.6
Atru.chr3.2347 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 56.2 73 39.7
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 56.2 57 47.4
Atru.chr6.162 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 56.2 56 50.0
CSS0046528 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-06 56.2 57 45.6
CANSAT25G0932 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-06 56.2 52 53.8
MBI02_g15379_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.2e-06 56.2 52 51.9
MBI10_g05708_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.2e-06 56.2 55 50.9
MBI17_g23175_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 2.2e-06 56.2 46 60.9
MBI18_g05084_MAGBIO Magnolia biondii HOM05D001181 ORTHO05D000004 2.2e-06 56.2 75 44.0
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-06 56.2 50 52.0
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 2.2e-06 56.2 50 56.0
Atru.chr1.2043 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 56 46.4
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 56 50.0
Atru.chr4.466 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 64 43.8
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 54 44.4
Aqoxy1G03439 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.9e-06 55.8 51 52.9
Aqoxy4G01866 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.9e-06 55.8 48 56.2
arahy.Tifrunner.gnm1.ann1.6UG5XV Arachis hypogaea HOM05D000003 ORTHO05D000004 2.9e-06 55.8 57 38.6
PSO017G4751 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 60 48.3
PSO339G4346 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 67 46.3
PSO393G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 57 50.9
PSO729G0214 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 45 55.6
Atru.chr2.2565 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-06 55.5 57 49.1
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-06 55.5 56 50.0
Atru.chr9.656 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-06 55.5 56 48.2
Aqoxy2G00968 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.8e-06 55.5 57 47.4
Aqoxy2G01461 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.8e-06 55.5 56 44.6
Aqoxy7G02223 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.8e-06 55.5 50 50.0
CSS0000625 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-06 55.5 48 45.8
CSS0030642 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-06 55.5 48 45.8
PSO063G5867 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-06 55.5 67 46.3
PSO675G3943 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-06 55.5 57 50.9
SHI38322 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.5 74 43.2
Sopen11g018420 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-06 55.5 48 52.1
TPR.G27496 Trifolium pratense HOM05D000003 ORTHO05D000004 3.8e-06 55.5 57 47.4
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-06 55.1 57 43.9
Aqoxy6G01479 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.0e-06 55.1 62 48.4
CSS0006009 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.0e-06 55.1 56 44.6
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.0e-06 55.1 69 43.5
ECA238G4438 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.0e-06 55.1 64 46.9
ECA248G2000 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.0e-06 55.1 129 34.1
MBI01_g32843_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 55 52.7
MBI16_g10440_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 56 44.6
Oeu000958.1 Olea europaea HOM05D000412 ORTHO05D000429 5.0e-06 55.1 55 47.3
PSO151G0176 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-06 55.1 38 60.5
SEGI_35330 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 5.0e-06 55.1 60 45.0
Sopen04g013750 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 52 50.0
Sopen06g010980 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 48 54.2
Atru.chr1.3207 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 54.7 56 48.2
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 54.7 56 42.9
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 54.7 56 44.6
Aa31LG11G7950 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.5e-06 54.7 67 35.8
Aqoxy4G00279 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.5e-06 54.7 57 47.4
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.5e-06 54.7 57 47.4
CSS0008466 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.5e-06 54.7 57 47.4
CSS0025791 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.5e-06 54.7 57 47.4
ECA248G0911 Erigeron canadensis HOM05D000003 ORTHO05D011516 6.5e-06 54.7 57 52.6
HanXRQChr07g0194271 Helianthus annuus HOM05D000003 ORTHO05D000004 6.5e-06 54.7 71 40.8
HanXRQChr09g0272141 Helianthus annuus HOM05D000003 ORTHO05D000004 6.5e-06 54.7 71 40.8
Atru.chr6.171 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-06 54.3 56 42.9
Atru.chr8.1497 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-06 54.3 56 44.6
Aqoxy1G03267 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.5e-06 54.3 50 48.0
Aqoxy3G01412 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.5e-06 54.3 56 46.4
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.5e-06 54.3 56 46.4
CSS0028753 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.5e-06 54.3 59 44.1
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 8.5e-06 54.3 46 50.0
MBI08_g39701_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.5e-06 54.3 52 51.9
PSO832G3793 Papaver somniferum HOM05D000003 ORTHO05D000004 8.5e-06 54.3 57 50.9
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 8.5e-06 54.3 55 50.9


User provided reference genes

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