Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 7.0e-300 1033.1 498 100.0
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 2.3e-181 639.4 508 61.6
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 6.0e-174 614.8 504 60.7
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 2.3e-173 612.8 501 61.7
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 3.9e-173 612.1 498 60.6
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 5.1e-173 611.7 507 61.1
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 3.3e-172 609.0 507 61.7
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 1.2e-171 607.1 506 59.9
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 3.6e-171 605.5 505 61.8
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 1.1e-170 604.0 507 60.0
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 2.3e-170 602.8 504 60.5
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 3.1e-170 602.4 509 59.7
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 4.4e-169 598.6 501 59.7
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.7e-168 596.7 504 60.3
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 1.7e-168 596.7 507 60.2
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 2.9e-168 595.9 504 59.5
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 4.9e-168 595.1 507 60.6
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 4.9e-168 595.1 508 59.3
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 6.4e-168 594.7 505 60.2
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.4e-167 593.6 504 60.3
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.9e-167 593.2 504 60.1
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 2.4e-167 592.8 504 60.1
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.4e-167 592.8 504 60.1
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 3.2e-167 592.4 513 57.9
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 7.1e-167 591.3 504 59.9
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 2.1e-166 589.7 513 58.9
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.7e-166 589.3 504 59.9
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 3.5e-166 589.0 500 59.2
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 7.8e-166 587.8 502 60.0
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 1.0e-165 587.4 497 61.2
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 3.9e-165 585.5 503 59.8
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 2.5e-164 582.8 510 58.2
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 7.3e-164 581.3 506 59.9
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 2.1e-163 579.7 505 58.2
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 2.1e-163 579.7 507 59.0
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 1.1e-162 577.4 496 59.5
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 1.8e-162 576.6 515 58.1
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 3.1e-162 575.9 514 56.0
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 3.1e-162 575.9 498 57.4
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 3.1e-162 575.9 509 58.7
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 6.8e-162 574.7 509 59.1
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 1.5e-161 573.5 510 57.8
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 2.0e-161 573.2 506 56.7
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 2.0e-161 573.2 516 57.8
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 3.4e-161 572.4 528 55.1
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 9.9e-161 570.9 507 56.0
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 4.9e-160 568.5 506 57.3
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 8.4e-160 567.8 507 58.2
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 1.9e-159 566.6 510 58.2
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 2.4e-159 566.2 507 57.4
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 4.2e-159 565.5 504 57.7
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 7.8e-158 561.2 514 55.4
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 7.8e-158 561.2 514 55.4
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 3.0e-157 559.3 504 56.3
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 6.6e-157 558.1 504 56.7
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 8.7e-157 557.8 498 57.2
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 1.9e-156 556.6 503 56.3
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 1.9e-156 556.6 506 55.5
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 2.5e-156 556.2 504 56.2
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 4.3e-156 555.4 505 57.0
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 5.6e-156 555.1 503 57.1
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 7.3e-156 554.7 502 57.4
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 1.3e-155 553.9 510 56.9
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 2.1e-155 553.1 505 58.0
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 8.1e-155 551.2 505 57.6
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 8.1e-155 551.2 503 56.5
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 1.1e-154 550.8 505 57.8
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 3.1e-154 549.3 504 55.8
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 5.3e-154 548.5 505 57.6
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 6.9e-154 548.1 503 57.5
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 2.0e-153 546.6 503 57.3
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 2.6e-153 546.2 504 55.4
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 3.4e-153 545.8 498 57.8
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 3.4e-153 545.8 507 56.2
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 1.7e-152 543.5 505 57.2
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 2.9e-152 542.7 509 57.8
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 8.4e-152 541.2 497 55.9
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 3.2e-151 539.3 508 56.1
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 4.6e-150 535.4 502 56.6
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.7e-149 533.5 505 55.2
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 3.9e-149 532.3 504 54.4
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 5.1e-149 531.9 506 54.7
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 4.3e-148 528.9 505 54.3
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 7.3e-148 528.1 496 55.8
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 8.1e-147 524.6 558 52.2
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 9.9e-145 517.7 507 55.2
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 1.6e-139 500.4 442 57.0
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 1.2e-137 494.2 502 51.8
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 2.7e-134 483.0 501 51.7
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 1.4e-130 470.7 464 52.6
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 5.1e-125 452.2 510 47.6
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 9.7e-116 421.4 494 46.0
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 1.7e-115 420.6 493 46.5
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 1.7e-112 410.6 408 53.2
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 1.2e-110 404.4 312 62.8
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 1.5e-100 370.9 298 60.4
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 1.4e-90 337.8 298 58.1
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 2.0e-65 254.2 219 55.7
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 2.6e-60 237.3 180 63.3
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 2.2e-59 234.2 220 53.6
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 9.5e-55 218.8 197 53.8
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 9.5e-55 218.8 284 45.1
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 7.6e-52 209.1 267 44.9
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 1.2e-49 201.8 131 72.5
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 1.7e-48 198.0 129 72.1
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 6.6e-48 196.1 204 49.5
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 6.0e-41 172.9 171 53.2
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 1.3e-27 128.6 102 59.8
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 4.5e-20 103.6 83 60.2
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 9.6e-15 85.9 40 87.5
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 9.6e-15 85.9 40 87.5
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 9.6e-15 85.9 40 87.5


User provided reference genes

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