Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.1e-105 386.7 203 100.0
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.2e-101 373.2 203 96.6
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 1.7e-66 256.5 200 69.0
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 7.1e-65 251.1 196 71.9
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 9.2e-65 250.8 193 70.5
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 2.7e-64 249.2 189 70.4
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 6.6e-63 244.6 198 65.7
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 6.6e-63 244.6 195 66.2
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.1e-62 243.8 198 65.2
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 2.8e-61 239.2 171 73.1
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 3.6e-61 238.8 164 76.2
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.6e-61 238.8 191 66.0
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 6.2e-61 238.0 186 67.7
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 1.4e-60 236.9 199 66.8
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 1.8e-60 236.5 192 67.7
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.8e-60 236.5 195 66.2
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 4.0e-60 235.3 195 63.6
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 6.8e-60 234.6 195 63.6
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.2e-59 233.8 201 66.7
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 2.0e-59 233.0 177 69.5
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 2.6e-59 232.6 163 74.2
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 3.4e-59 232.3 195 65.1
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.4e-59 232.3 201 65.2
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 5.8e-59 231.5 185 66.5
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 5.8e-59 231.5 194 63.9
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 5.8e-59 231.5 199 66.3
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 7.6e-59 231.1 199 67.8
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 7.6e-59 231.1 201 65.2
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.3e-58 230.3 199 66.3
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.3e-58 230.3 139 82.0
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.7e-58 229.9 144 80.6
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.7e-58 229.9 185 66.5
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.7e-58 229.9 200 63.5
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 2.2e-58 229.6 195 64.1
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 2.2e-58 229.6 197 64.0
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 3.8e-58 228.8 180 68.9
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 4.9e-58 228.4 193 63.7
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 1.1e-57 227.3 172 70.9
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 1.1e-57 227.3 195 61.5
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 2.4e-57 226.1 216 61.1
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 3.2e-57 225.7 199 65.8
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 4.2e-57 225.3 146 78.1
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 5.4e-57 224.9 205 62.4
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 5.4e-57 224.9 173 68.2
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 7.1e-57 224.6 138 81.9
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 9.3e-57 224.2 147 79.6
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 9.3e-57 224.2 184 67.9
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 1.2e-56 223.8 185 67.0
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.2e-56 223.8 152 75.0
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.2e-56 223.8 177 68.9
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 2.1e-56 223.0 199 65.3
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 7.8e-56 221.1 213 61.0
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 7.8e-56 221.1 150 75.3
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 2.3e-55 219.5 152 75.0
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 3.9e-55 218.8 158 72.2
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 5.1e-55 218.4 210 60.5
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 8.7e-55 217.6 147 74.1
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 9.6e-54 214.2 227 54.2
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.6e-53 213.4 227 54.2
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 2.1e-53 213.0 144 76.4
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 3.6e-53 212.2 193 62.7
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 3.6e-53 212.2 197 60.4
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 4.8e-53 211.8 163 69.3
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 4.8e-53 211.8 186 63.4
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.8e-53 211.8 190 65.3
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 8.1e-53 211.1 163 69.3
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 1.1e-52 210.7 192 62.0
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.4e-52 210.3 137 77.4
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.4e-52 210.3 159 72.3
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.8e-52 209.9 200 60.0
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 2.4e-52 209.5 191 61.3
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.4e-52 209.5 199 62.3
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 3.1e-52 209.1 156 69.2
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 4.0e-52 208.8 171 66.1
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 1.2e-51 207.2 202 58.9
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 1.5e-51 206.8 184 64.1
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 1.5e-51 206.8 184 64.1
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 2.0e-51 206.5 184 64.1
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 5.8e-51 204.9 200 58.5
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 2.9e-50 202.6 230 53.9
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 8.4e-50 201.1 131 77.9
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 2.4e-49 199.5 133 75.9
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 4.2e-49 198.7 151 68.9
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 2.1e-48 196.4 198 59.6
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 1.7e-47 193.4 150 69.3
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 8.7e-47 191.0 135 70.4
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 6.9e-44 181.4 206 50.5
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 7.6e-43 177.9 199 57.3
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.3e-42 177.2 106 84.9
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 1.4e-41 173.7 227 51.5
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 2.4e-41 172.9 122 68.9
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 1.0e-39 167.5 103 80.6
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.8e-39 166.8 103 83.5
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 8.7e-39 164.5 109 80.7
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.1e-38 164.1 97 85.6
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 3.3e-38 162.5 142 63.4
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 2.8e-37 159.5 102 78.4
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 8.1e-37 157.9 148 58.8
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 4.9e-34 148.7 218 45.4
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 8.7e-31 137.9 106 65.1
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 9.6e-30 134.4 124 55.6
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 4.8e-29 132.1 91 71.4
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 6.3e-29 131.7 196 43.9
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 8.2e-29 131.3 134 54.5
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 2.4e-28 129.8 124 52.4
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 4.1e-28 129.0 87 77.0
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 6.5e-26 121.7 71 90.1
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 6.5e-26 121.7 71 90.1
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 5.5e-25 118.6 95 64.2
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.3e-23 113.2 141 50.4
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 6.7e-23 111.7 63 87.3
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.4e-20 103.2 68 70.6
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.1e-20 102.4 73 69.9
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 6.1e-16 88.6 109 37.6
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 8.5e-10 68.2 39 76.9
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 8.5e-10 68.2 39 76.9


User provided reference genes

Program Settings