Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 2.0e-153 545.8 286 100.0
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.9e-124 449.5 262 92.0
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 3.4e-65 252.7 238 62.2
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 1.6e-62 243.8 239 59.4
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 1.0e-61 241.1 235 58.3
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 5.3e-58 228.8 213 60.6
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 9.0e-58 228.0 237 56.1
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 1.5e-57 227.3 234 56.0
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 1.7e-56 223.8 223 57.8
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 2.2e-56 223.4 212 58.0
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 2.9e-56 223.0 263 52.1
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 5.0e-56 222.2 225 58.2
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 3.2e-55 219.5 233 57.5
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 3.2e-55 219.5 208 61.5
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 4.2e-55 219.2 236 55.5
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.2e-55 219.2 218 56.4
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 9.3e-55 218.0 230 54.3
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 1.2e-54 217.6 224 55.8
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 1.2e-54 217.6 213 57.7
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 3.6e-54 216.1 201 59.7
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 4.6e-54 215.7 221 57.5
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.6e-54 215.7 218 56.4
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 2.3e-53 213.4 270 53.3
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 3.0e-53 213.0 337 43.3
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 3.9e-53 212.6 230 53.9
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 5.1e-53 212.2 230 53.9
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 5.1e-53 212.2 237 54.0
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 1.1e-52 211.1 262 51.5
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 1.1e-52 211.1 220 57.3
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.5e-52 210.7 241 52.7
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.5e-52 209.9 237 55.3
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 3.3e-52 209.5 208 58.7
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 3.3e-52 209.5 218 54.1
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 7.4e-52 208.4 210 56.2
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 1.3e-51 207.6 235 55.3
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 8.2e-51 204.9 239 52.7
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 1.4e-50 204.1 226 56.2
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.4e-50 203.4 211 57.8
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 2.4e-50 203.4 257 51.0
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 4.1e-50 202.6 231 53.2
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 9.0e-50 201.4 243 51.0
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.5e-49 200.7 236 52.5
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 2.0e-49 200.3 229 52.4
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 2.6e-49 199.9 209 57.4
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 7.7e-49 198.4 258 48.4
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 1.3e-48 197.6 211 55.9
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 3.8e-48 196.1 234 50.4
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 6.5e-48 195.3 237 51.9
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 8.5e-48 194.9 242 50.0
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 1.4e-47 194.1 259 49.0
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 7.2e-47 191.8 209 55.5
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 9.4e-47 191.4 206 54.9
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 2.1e-46 190.3 227 51.1
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 6.1e-46 188.7 203 56.2
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 6.1e-46 188.7 263 47.5
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 7.9e-46 188.3 237 50.6
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 7.9e-46 188.3 223 52.0
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 1.4e-45 187.6 205 52.7
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 3.0e-45 186.4 235 48.5
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 3.9e-45 186.0 256 48.0
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 5.1e-45 185.7 267 46.1
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 5.1e-45 185.7 245 49.8
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 1.1e-44 184.5 213 50.2
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 2.0e-44 183.7 212 54.2
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 3.3e-44 183.0 215 53.5
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 3.3e-44 183.0 214 51.4
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 4.4e-44 182.6 231 48.1
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 9.7e-44 181.4 261 47.1
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 1.3e-43 181.0 234 47.9
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 8.2e-43 178.3 191 56.0
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 1.8e-42 177.2 207 52.2
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 2.4e-42 176.8 183 57.4
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 3.1e-42 176.4 305 42.0
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 6.9e-42 175.3 245 45.3
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 9.1e-42 174.9 188 55.3
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 2.0e-41 173.7 277 44.0
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 2.0e-41 173.7 259 46.3
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 4.5e-41 172.6 239 46.0
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 4.5e-41 172.6 209 49.8
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 7.7e-41 171.8 273 45.4
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 2.2e-40 170.2 250 45.2
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 5.0e-40 169.1 260 45.8
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 5.0e-40 169.1 252 45.6
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 5.0e-40 169.1 314 40.8
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 6.5e-40 168.7 149 62.4
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 8.5e-40 168.3 271 43.9
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 3.2e-39 166.4 215 46.0
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 1.6e-38 164.1 153 62.7
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 1.4e-37 161.0 212 49.1
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 3.0e-37 159.8 276 42.8
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 8.8e-37 158.3 311 40.5
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 2.0e-36 157.1 279 43.0
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 2.0e-36 157.1 259 44.8
SEGI_38183 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 2.6e-36 156.8 236 43.2
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 4.4e-36 156.0 171 53.2
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 7.4e-36 155.2 149 57.7
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 9.7e-36 154.8 210 46.7
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 1.3e-35 154.5 259 45.2
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 1.7e-35 154.1 181 51.4
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 2.2e-35 153.7 246 41.9
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 2.2e-35 153.7 262 43.5
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 4.8e-35 152.5 229 44.5
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 6.3e-35 152.1 240 43.8
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 1.1e-34 151.4 196 47.4
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 1.1e-34 151.4 216 44.0
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 1.4e-34 151.0 183 49.7
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 1.4e-34 151.0 255 42.0
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 1.4e-34 151.0 183 49.7
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 5.3e-34 149.1 234 41.5
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 7.0e-34 148.7 191 47.6
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 4.5e-33 146.0 245 40.0
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 5.9e-33 145.6 259 41.3
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 7.7e-33 145.2 199 42.7
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.0e-32 144.8 221 44.3
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 2.2e-32 143.7 179 48.6
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 5.0e-32 142.5 210 43.3
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 1.5e-31 141.0 233 43.3
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 4.2e-31 139.4 172 49.4
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 2.7e-30 136.7 294 37.4
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 2.7e-30 136.7 294 37.4
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 2.7e-30 136.7 257 40.1
TAR629G2534 Trochodendron aralioides HOM05D003513 ORTHO05D004660 2.3e-29 133.7 116 68.1
Nitab4.5_0001477g0150 Nicotiana tabacum HOM05D003513 ORTHO05D004660 3.0e-29 133.3 241 39.4
Pp3c17_21630 Physcomitrium patens HOM05D003513 ORTHO05D004660 4.4e-28 129.4 249 39.4
Nitab4.5_0007763g0010 Nicotiana tabacum HOM05D003513 ORTHO05D004660 1.8e-26 124.0 169 47.3
Hund24144 Selenicereus undatus HOM05D003513 ORTHO05D004660 2.4e-26 123.6 181 45.9
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 7.7e-25 118.6 153 49.0
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 2.9e-24 116.7 201 40.8
Sc21g0000900 Simmondsia chinensis HOM05D003513 ORTHO05D004660 2.9e-24 116.7 153 45.8
CAN.G192.6 Capsicum annuum HOM05D003513 ORTHO05D004660 1.5e-23 114.4 198 44.9
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 8.0e-22 108.6 172 41.9
Migut.B00497 Erythranthe guttata HOM05D003513 ORTHO05D004660 8.8e-21 105.1 169 42.0
Zm00001eb303370 Zea mays HOM05D003513 ORTHO05D004660 8.8e-21 105.1 146 43.2
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 4.4e-20 102.8 183 40.4
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 4.4e-20 102.8 183 40.4
Eucgr.L02047 Eucalyptus grandis HOM05D003513 ORTHO05D004660 1.1e-18 98.2 147 46.9
Glyma.07G229300 Glycine max HOM05D003513 ORTHO05D004660 1.4e-18 97.8 106 51.9
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 4.1e-18 96.3 190 37.4
BcaB02g10961 Brassica carinata HOM05D003513 ORTHO05D004660 3.5e-17 93.2 86 58.1
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 2.2e-16 90.5 238 33.2
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 2.9e-16 90.1 172 39.0
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 8.5e-16 88.6 172 40.1
TPR.G22787 Trifolium pratense HOM05D003513 ORTHO05D004660 2.5e-15 87.0 146 43.8
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 9.5e-15 85.1 174 36.8
A08p11320 Brassica napus HOM05D003513 ORTHO05D004660 2.8e-14 83.6 58 70.7
A10p16400 Brassica napus HOM05D003513 ORTHO05D004660 2.8e-14 83.6 58 70.7
C06p15560 Brassica napus HOM05D003513 ORTHO05D004660 2.8e-14 83.6 58 70.7
C08p23080 Brassica napus HOM05D003513 ORTHO05D004660 2.8e-14 83.6 58 70.7
A09p33590 Brassica napus HOM05D003513 ORTHO05D004660 1.4e-13 81.3 56 71.4
C06p18710 Brassica napus HOM05D003513 ORTHO05D004660 1.4e-13 81.3 58 67.2
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 1.8e-13 80.9 172 36.6
A03p66860 Brassica napus HOM05D003513 ORTHO05D004660 2.3e-13 80.5 71 54.9
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 4.0e-13 79.7 61 67.2
BraA09t38150Z Brassica rapa HOM05D003513 ORTHO05D004660 4.0e-13 79.7 56 69.6
Phvul.006G197800 Phaseolus vulgaris HOM05D003513 ORTHO05D004660 5.2e-13 79.3 187 34.2
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 8.8e-13 78.6 176 36.9
Gohir.A01G179633 Gossypium hirsutum HOM05D003513 ORTHO05D004660 1.2e-12 78.2 73 54.8
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 4.9e-11 72.8 54 66.7
Gorai.002G212100 Gossypium raimondii HOM05D003513 ORTHO05D004660 6.3e-11 72.4 51 66.7
MCO09G316 Micromonas commoda HOM05D003513 ORTHO05D004660 6.3e-11 72.4 198 32.8
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 1.1e-10 71.6 174 35.1
TAR636G1841 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.4e-10 71.2 92 47.8
TWI59G0638 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 2.4e-10 70.5 126 45.2
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 1.2e-09 68.2 174 34.5
A05p23280 Brassica napus HOM05D003513 ORTHO05D004660 3.8e-08 63.2 46 65.2
BraA05t21192Z Brassica rapa HOM05D003513 ORTHO05D004660 3.8e-08 63.2 46 65.2
MBI12_g20398_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.9e-07 60.8 100 45.0
BcaC06g33105 Brassica carinata HOM05D005554 ORTHO05D021652 3.3e-07 60.1 39 66.7
CBR_g21766 Chara braunii HOM05D003513 ORTHO05D004660 5.6e-07 59.3 148 32.4
Atru.chr8.1462 Acer truncatum HOM05D002718 ORTHO05D003269 1.2e-06 58.2 46 63.0
Gohir.A10G119000 Gossypium hirsutum HOM05D001046 ORTHO05D005883 1.2e-06 58.2 63 52.4
BcaB05g23799 Brassica carinata HOM05D003513 ORTHO05D004660 2.1e-06 57.4 133 33.8


User provided reference genes

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