Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g03943_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.7e-108 396.0 194 100.0
MBI18_g47010_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.6e-58 229.9 200 65.5
MBI16_g25874_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 5.7e-56 221.5 303 48.5
MBI18_g33166_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.2e-39 166.4 115 77.4
MBI18_g19470_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.4e-33 147.1 169 54.4
MBI13_g10206_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 4.4e-32 142.1 78 91.0
MBI18_g03939_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 9.8e-32 141.0 134 58.2
MBI05_g16127_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 4.6e-21 105.5 123 51.2
MBI18_g06981_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.6e-16 89.7 48 89.6
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 4.4e-16 89.0 126 42.9
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.7e-15 87.0 97 50.5
MBI07_g43659_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 2.2e-15 86.7 58 77.6
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 7.1e-14 81.6 50 70.0
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 7.1e-14 81.6 50 70.0
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 1.6e-13 80.5 116 44.0
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 2.1e-13 80.1 50 68.0
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 2.1e-13 80.1 58 69.0
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 2.1e-13 80.1 50 68.0
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 2.1e-13 80.1 52 67.3
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 2.1e-13 80.1 50 68.0
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 2.7e-13 79.7 50 68.0
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 3.5e-13 79.3 50 68.0
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 3.5e-13 79.3 50 68.0
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 3.5e-13 79.3 50 70.0
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 3.5e-13 79.3 50 70.0
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 4.6e-13 79.0 50 70.0
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 4.6e-13 79.0 50 70.0
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 4.6e-13 79.0 50 66.0
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 4.6e-13 79.0 62 61.3
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 6.0e-13 78.6 50 66.0
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 6.0e-13 78.6 50 66.0
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 6.0e-13 78.6 100 46.0
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 6.0e-13 78.6 72 55.6
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 6.0e-13 78.6 50 68.0
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 6.0e-13 78.6 50 68.0
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 7.8e-13 78.2 50 68.0
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 7.8e-13 78.2 50 68.0
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.0e-12 77.8 50 66.0
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 1.0e-12 77.8 50 66.0
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 1.0e-12 77.8 50 66.0
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 1.0e-12 77.8 124 41.1
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 1.3e-12 77.4 50 66.0
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 1.3e-12 77.4 50 66.0
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 1.3e-12 77.4 50 66.0
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 1.3e-12 77.4 50 66.0
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 1.3e-12 77.4 50 66.0
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 1.3e-12 77.4 62 59.7
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 1.7e-12 77.0 50 64.0
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 1.7e-12 77.0 50 68.0
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 2.3e-12 76.6 51 66.7
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 2.3e-12 76.6 50 68.0
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 2.3e-12 76.6 50 68.0
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 3.0e-12 76.3 50 66.0
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 3.9e-12 75.9 50 64.0
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 3.9e-12 75.9 72 51.4
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 5.1e-12 75.5 50 66.0
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 5.1e-12 75.5 50 64.0
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 5.1e-12 75.5 50 64.0
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 5.1e-12 75.5 50 66.0
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 5.1e-12 75.5 46 71.7
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 6.6e-12 75.1 97 43.3
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 6.6e-12 75.1 46 69.6
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 6.6e-12 75.1 46 73.9
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 8.7e-12 74.7 72 51.4
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 8.7e-12 74.7 50 64.0
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 8.7e-12 74.7 50 64.0
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 8.7e-12 74.7 50 68.0
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 8.7e-12 74.7 50 64.0
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 1.1e-11 74.3 101 42.6
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 1.5e-11 73.9 62 58.1
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 1.5e-11 73.9 50 64.0
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 1.9e-11 73.6 54 59.3
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 1.9e-11 73.6 103 42.7
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 1.9e-11 73.6 97 44.3
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 2.5e-11 73.2 100 44.0
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 2.5e-11 73.2 50 64.0
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 2.5e-11 73.2 50 64.0
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 2.5e-11 73.2 50 64.0
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 3.3e-11 72.8 50 64.0
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 3.3e-11 72.8 50 64.0
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 3.3e-11 72.8 103 42.7
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 3.3e-11 72.8 50 62.0
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 3.3e-11 72.8 50 64.0
CiPaw.05G114700 Carya illinoinensis HOM05D005075 ORTHO05D007097 4.3e-11 72.4 97 41.2
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 4.3e-11 72.4 50 62.0
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 4.3e-11 72.4 50 56.0
Actinidia08085 Actinidia chinensis HOM05D005075 ORTHO05D007097 5.6e-11 72.0 50 64.0
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 5.6e-11 72.0 50 62.0
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 5.6e-11 72.0 50 62.0
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 5.6e-11 72.0 50 64.0
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 5.6e-11 72.0 50 64.0
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 5.6e-11 72.0 62 59.7
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 7.3e-11 71.6 50 64.0
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 7.3e-11 71.6 109 40.4
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 9.6e-11 71.2 97 40.2
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 9.6e-11 71.2 111 40.5
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 9.6e-11 71.2 50 60.0
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 1.3e-10 70.9 72 48.6
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.8e-10 69.7 103 39.8
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 3.6e-10 69.3 58 62.1
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 3.6e-10 69.3 50 60.0
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 4.8e-10 68.9 50 60.0
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 6.2e-10 68.6 49 63.3
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 6.2e-10 68.6 103 39.8
Os01g0901700 Oryza sativa ssp. japonica HOM05D005075 ORTHO05D007097 6.2e-10 68.6 50 60.0
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 6.2e-10 68.6 72 50.0
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 1.8e-09 67.0 50 56.0
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 1.2e-08 64.3 50 52.0
HPP92_001244 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.3e-07 60.8 37 59.5
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 4.9e-07 58.9 146 29.5
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 2.4e-06 56.6 49 44.9


User provided reference genes

Program Settings