Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.6e-101 372.9 200 100.0
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 9.8e-35 151.0 117 65.8
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.1e-33 147.5 134 62.7
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.4e-33 147.1 134 61.9
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.2e-32 144.1 128 60.9
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.0e-31 141.0 128 59.4
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.0e-31 139.4 135 60.0
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 5.0e-31 138.7 136 59.6
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 8.6e-31 137.9 128 60.9
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 8.6e-31 137.9 133 59.4
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.9e-30 136.7 135 56.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 3.3e-30 136.0 135 57.8
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 3.3e-30 136.0 133 57.1
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 5.6e-30 135.2 117 65.0
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 5.6e-30 135.2 117 65.0
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 9.5e-30 134.4 117 64.1
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 3.6e-29 132.5 127 62.2
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 4.7e-29 132.1 129 57.4
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 4.7e-29 132.1 134 56.7
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 6.2e-29 131.7 131 57.3
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 8.0e-29 131.3 107 61.7
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.8e-28 130.2 126 57.1
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 1.8e-28 130.2 129 56.6
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 3.1e-28 129.4 132 56.8
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 4.0e-28 129.0 130 56.2
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 4.0e-28 129.0 121 59.5
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 4.0e-28 129.0 133 56.4
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 5.2e-28 128.6 120 62.5
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 6.8e-28 128.3 123 58.5
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 8.9e-28 127.9 123 61.0
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 8.9e-28 127.9 118 59.3
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 8.9e-28 127.9 118 61.0
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 1.2e-27 127.5 121 59.5
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.5e-27 127.1 139 56.8
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.5e-27 127.1 139 56.8
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.5e-27 127.1 134 54.5
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.6e-27 126.3 134 54.5
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 2.6e-27 126.3 99 64.6
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.6e-27 126.3 105 63.8
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 4.4e-27 125.6 119 59.7
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 5.8e-27 125.2 130 51.5
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 7.5e-27 124.8 126 60.3
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 7.5e-27 124.8 126 57.1
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 9.8e-27 124.4 133 51.1
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 1.3e-26 124.0 134 53.7
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.7e-26 123.6 125 55.2
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.7e-26 123.6 103 64.1
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.2e-26 123.2 141 54.6
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.9e-26 122.9 128 57.0
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.7e-26 122.5 137 53.3
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 3.7e-26 122.5 131 55.0
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 4.9e-26 122.1 133 54.1
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 4.9e-26 122.1 124 56.5
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 4.9e-26 122.1 120 54.2
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 6.4e-26 121.7 118 58.5
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 6.4e-26 121.7 124 55.6
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 6.4e-26 121.7 128 51.6
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.1e-25 120.9 128 50.0
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.1e-25 120.9 97 60.8
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 1.1e-25 120.9 110 60.9
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.9e-25 120.2 105 59.0
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.4e-25 119.8 131 55.7
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 3.2e-25 119.4 135 48.9
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 4.1e-25 119.0 121 52.9
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 4.1e-25 119.0 120 53.3
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 4.1e-25 119.0 118 53.4
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 5.4e-25 118.6 94 60.6
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 5.4e-25 118.6 94 60.6
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 5.4e-25 118.6 119 52.9
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 7.0e-25 118.2 111 55.9
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 9.2e-25 117.9 120 52.5
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 9.2e-25 117.9 120 52.5
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.2e-24 117.5 121 55.4
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.6e-24 117.1 134 52.2
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.6e-24 117.1 121 54.5
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.0e-24 116.7 121 52.9
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 2.0e-24 116.7 132 51.5
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 2.0e-24 116.7 133 50.4
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 2.0e-24 116.7 127 52.8
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-24 116.3 132 51.5
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 2.7e-24 116.3 132 51.5
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 2.7e-24 116.3 132 51.5
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 2.7e-24 116.3 120 53.3
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 3.5e-24 115.9 124 50.0
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.5e-24 115.9 134 51.5
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 4.6e-24 115.5 133 46.6
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 4.6e-24 115.5 131 52.7
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 6.0e-24 115.2 131 50.4
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 6.0e-24 115.2 133 48.9
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 6.0e-24 115.2 121 52.9
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.0e-24 115.2 134 50.7
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 6.0e-24 115.2 121 53.7
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 6.0e-24 115.2 121 53.7
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 7.8e-24 114.8 131 49.6
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.0e-23 114.4 121 53.7
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.3e-23 114.0 123 52.0
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-23 113.2 135 49.6
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 2.3e-23 113.2 130 50.0
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 3.9e-23 112.5 101 58.4
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 8.6e-23 111.3 132 47.7
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.1e-22 110.9 98 59.2
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.5e-22 109.8 104 53.8
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 7.3e-22 108.2 191 39.3
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 7.3e-22 108.2 130 48.5
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 9.5e-22 107.8 133 50.4
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.8e-21 106.3 119 52.9
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.6e-21 105.9 117 54.7
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 6.2e-21 105.1 136 48.5
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 6.2e-21 105.1 129 48.1
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 6.8e-20 101.7 135 44.4
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.2e-19 100.9 130 44.6
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 3.7e-18 95.9 143 42.0
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 4.9e-18 95.5 140 44.3
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 1.1e-17 94.4 115 48.7
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 9.2e-17 91.3 78 53.8
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.2e-16 90.9 101 47.5
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.3e-15 86.7 85 51.8
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 5.6e-14 82.0 75 58.7
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.2e-13 80.9 75 60.0
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 2.1e-13 80.1 120 43.3
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 2.8e-13 79.7 79 59.5
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.4e-12 77.4 88 53.4
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.7e-10 70.5 160 32.5
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 8.4e-10 68.2 114 38.6
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 2.1e-08 63.5 135 27.4
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 7.3e-06 55.1 45 53.3
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 7.3e-06 55.1 45 53.3


User provided reference genes

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