Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.8e-188 661.4 342 100.0
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 2.9e-135 485.7 345 71.6
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.0e-132 475.7 337 69.7
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 8.6e-132 474.2 333 70.0
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.1e-131 473.8 345 69.6
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.1e-130 469.5 339 68.1
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 1.1e-129 467.2 339 71.7
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 1.4e-129 466.8 337 70.3
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 1.8e-129 466.5 340 70.0
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 6.9e-129 464.5 337 70.6
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 1.2e-128 463.8 343 68.2
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 1.2e-128 463.8 343 69.1
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.5e-128 463.4 342 67.5
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 4.4e-128 461.8 316 70.9
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 1.7e-127 459.9 317 70.7
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 4.9e-127 458.4 339 69.3
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 8.4e-127 457.6 339 68.1
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 1.9e-126 456.4 339 67.6
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 2.4e-126 456.1 343 67.6
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 2.4e-126 456.1 317 72.6
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 3.2e-126 455.7 336 66.1
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 4.2e-126 455.3 328 68.3
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 2.1e-125 453.0 343 67.1
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 7.8e-125 451.1 341 66.3
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 7.8e-125 451.1 343 67.3
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 7.8e-125 451.1 337 67.1
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.0e-124 450.7 339 65.2
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 3.0e-124 449.1 340 66.8
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 3.0e-124 449.1 343 67.6
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 3.0e-124 449.1 343 67.6
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 5.1e-124 448.4 345 66.4
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 1.9e-123 446.4 337 68.0
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 5.6e-123 444.9 341 67.2
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.6e-123 444.9 349 67.0
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 2.1e-122 443.0 342 65.2
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 4.8e-122 441.8 329 64.7
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 4.8e-122 441.8 342 67.0
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 6.2e-122 441.4 336 67.0
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 8.1e-122 441.0 348 64.4
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.8e-121 439.9 351 63.2
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.5e-120 436.8 312 67.9
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 2.0e-120 436.4 312 67.6
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 2.6e-120 436.0 332 63.9
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 3.4e-120 435.6 341 64.5
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 7.6e-120 434.5 313 67.1
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 2.9e-119 432.6 314 66.6
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 6.4e-119 431.4 314 68.5
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.4e-119 431.4 337 65.0
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 8.4e-119 431.0 337 64.4
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 8.4e-119 431.0 336 64.9
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 1.1e-118 430.6 335 63.6
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 3.2e-118 429.1 315 67.3
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 3.2e-118 429.1 336 64.0
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 7.1e-118 427.9 343 63.8
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 1.2e-117 427.2 321 65.1
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 2.1e-117 426.4 340 64.7
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 2.1e-117 426.4 340 64.7
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.7e-117 426.0 341 62.5
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 2.7e-117 426.0 334 64.1
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 4.6e-117 425.2 340 65.0
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 4.6e-117 425.2 340 65.0
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 7.9e-117 424.5 344 62.5
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 1.0e-116 424.1 340 64.7
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 1.3e-116 423.7 312 67.3
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 1.3e-116 423.7 312 67.3
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 1.3e-116 423.7 312 67.3
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.3e-116 423.7 336 66.1
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 1.8e-116 423.3 340 65.6
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 2.3e-116 422.9 341 63.0
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 5.1e-116 421.8 338 63.9
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 5.1e-116 421.8 337 62.9
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 6.7e-116 421.4 338 63.3
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 8.7e-116 421.0 317 67.2
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 1.9e-115 419.9 343 62.4
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 2.5e-115 419.5 345 60.6
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 3.3e-115 419.1 317 65.0
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 4.8e-114 415.2 333 62.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 1.8e-113 413.3 336 63.1
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 2.4e-113 412.9 336 61.0
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 2.9e-111 406.0 344 62.8
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 3.8e-111 405.6 333 62.5
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 3.8e-111 405.6 336 63.1
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 4.9e-111 405.2 342 60.2
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 2.4e-110 402.9 337 60.8
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 3.2e-110 402.5 337 60.8
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 5.5e-110 401.7 336 61.6
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 2.7e-109 399.4 337 60.5
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 2.7e-109 399.4 345 58.8
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 7.9e-109 397.9 320 63.4
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 1.0e-108 397.5 315 62.2
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 3.0e-108 396.0 308 65.6
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 4.3e-107 392.1 333 61.0
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.3e-106 390.6 343 59.5
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.4e-105 387.1 340 59.7
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 1.8e-105 386.7 312 62.2
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.9e-103 379.4 334 59.0
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.5e-102 376.3 318 58.2
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.5e-102 376.3 318 58.2
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.2e-102 375.9 222 88.7
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.2e-102 375.6 326 58.3
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 3.5e-101 372.5 339 59.9
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 4.6e-101 372.1 334 55.7
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 4.6e-101 372.1 334 57.2
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 7.9e-101 371.3 334 55.7
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 3.9e-100 369.0 339 56.0
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.5e-99 366.3 324 59.6
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 3.3e-99 365.9 270 67.0
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.2e-98 363.2 340 55.0
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.8e-97 360.1 317 57.4
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 3.1e-97 359.4 254 68.5
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 6.9e-97 358.2 335 55.5
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 2.6e-96 356.3 316 56.3
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 3.4e-96 355.9 397 50.6
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 1.3e-95 354.0 347 54.8
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 1.1e-94 350.9 335 52.2
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 8.8e-92 341.3 190 92.6
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.1e-91 340.9 338 50.3
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 7.4e-91 338.2 316 54.1
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.2e-90 336.7 296 61.8
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.8e-90 336.3 329 53.5
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 4.8e-90 335.5 314 56.7
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 4.1e-89 332.4 338 50.6
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 4.1e-89 332.4 334 50.9
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 4.1e-89 332.4 305 56.7
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 6.9e-89 331.6 335 52.2
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 9.1e-89 331.3 316 53.2
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.2e-88 330.9 334 50.9
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 1.2e-88 330.9 323 53.6
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 1.2e-88 330.9 325 53.5
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 7.7e-88 328.2 315 52.1
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.3e-87 327.4 334 50.3
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 1.7e-87 327.0 315 52.1
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.1e-86 324.3 334 53.3
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.5e-86 323.2 334 49.7
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 5.5e-86 322.0 338 48.8
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 5.5e-86 322.0 265 60.8
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 2.1e-85 320.1 329 49.5
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 2.7e-85 319.7 326 53.4
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.9e-84 315.8 183 91.3
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 6.7e-84 315.1 317 50.2
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 6.7e-84 315.1 317 50.2
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 2.6e-83 313.2 343 47.5
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 6.3e-82 308.5 271 56.5
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 2.6e-80 303.1 343 48.7
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 1.7e-79 300.4 327 47.1
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 5.0e-79 298.9 259 59.8
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 9.4e-78 294.7 268 56.3
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.8e-76 290.4 179 75.4
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.3e-76 290.0 249 56.6
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.6e-75 286.6 189 72.5
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.6e-72 276.6 191 67.5
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 8.5e-71 271.6 189 67.2
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 3.6e-69 266.2 316 48.4
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.7e-64 248.4 189 60.8
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 5.7e-59 232.3 221 55.2
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 2.7e-56 223.4 190 55.8
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 4.5e-56 222.6 336 38.7
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 9.5e-54 214.9 184 54.9
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.4e-52 211.1 234 47.9
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 9.8e-51 204.9 228 52.2
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 1.0e-47 194.9 328 37.2
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 1.6e-45 187.6 160 61.9
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 2.3e-36 157.1 159 57.2
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 6.8e-36 155.6 172 45.9
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 1.2e-32 144.8 163 49.7
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 1.1e-30 138.3 104 65.4
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 5.6e-30 136.0 92 66.3
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-29 134.8 89 67.4
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 1.4e-28 131.3 334 30.5
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 1.5e-27 127.9 95 63.2
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 3.9e-23 113.2 77 68.8
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 5.8e-19 99.4 81 58.0
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 7.6e-19 99.0 80 60.0
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 2.9e-18 97.1 76 56.6
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 7.1e-17 92.4 75 64.0
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 2.1e-13 80.9 57 68.4
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 4.7e-13 79.7 57 64.9
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 1.1e-12 78.6 67 56.7
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 6.9e-12 75.9 54 66.7
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 4.4e-11 73.2 74 52.7
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.9e-10 70.5 76 48.7


User provided reference genes

Program Settings