Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 2.1e-103 379.0 189 100.0
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 7.0e-75 284.3 189 74.1
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 2.8e-71 272.3 190 71.6
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 4.7e-71 271.6 190 70.5
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 3.1e-70 268.9 189 70.4
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 1.2e-69 266.9 190 70.0
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 1.5e-69 266.5 190 69.5
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 5.8e-69 264.6 190 67.9
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 4.9e-68 261.5 190 68.4
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 1.4e-67 260.0 198 68.2
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 7.0e-67 257.7 190 67.4
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 1.2e-66 256.9 189 67.2
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 1.6e-66 256.5 190 64.7
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 2.0e-66 256.1 190 67.9
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 1.7e-65 253.1 190 65.3
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 1.7e-65 253.1 190 66.8
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 1.7e-65 253.1 190 65.3
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 5.0e-65 251.5 190 64.2
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 5.0e-65 251.5 190 65.8
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 6.6e-65 251.1 190 64.2
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 6.6e-65 251.1 190 64.7
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 1.1e-64 250.4 190 65.8
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 1.9e-64 249.6 190 66.3
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 1.9e-64 249.6 190 64.2
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 1.9e-64 249.6 190 63.7
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 2.5e-64 249.2 190 63.7
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 7.3e-64 247.7 190 64.2
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 7.3e-64 247.7 190 64.7
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 3.6e-63 245.4 190 62.1
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 1.4e-62 243.4 190 62.6
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 1.4e-62 243.4 190 64.2
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 1.4e-62 243.4 190 64.7
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 1.8e-62 243.0 190 63.2
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 3.1e-62 242.3 190 63.7
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 4.0e-62 241.9 190 62.6
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 5.2e-62 241.5 190 62.6
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 2.6e-61 239.2 190 63.2
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 3.4e-61 238.8 190 64.2
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 4.4e-61 238.4 190 63.7
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 5.8e-61 238.0 190 63.7
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 3.7e-60 235.3 190 62.6
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 6.4e-60 234.6 190 60.5
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 8.3e-60 234.2 190 61.6
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 1.1e-59 233.8 189 62.4
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.1e-59 233.8 190 63.2
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 2.4e-59 232.6 191 61.3
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 2.4e-59 232.6 190 58.9
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 3.2e-59 232.3 186 62.9
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 4.1e-59 231.9 189 63.0
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 4.1e-59 231.9 190 62.1
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 1.2e-58 230.3 190 58.9
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 1.6e-58 229.9 190 58.9
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 2.1e-58 229.6 190 60.5
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 2.1e-58 229.6 191 60.7
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 2.1e-58 229.6 191 60.7
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 3.5e-58 228.8 190 60.5
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 6.0e-58 228.0 190 61.6
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 6.0e-58 228.0 190 61.6
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 6.0e-58 228.0 190 57.9
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 6.0e-58 228.0 190 62.1
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 7.8e-58 227.6 190 56.8
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 7.8e-58 227.6 190 56.8
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 2.3e-57 226.1 190 57.4
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 2.3e-57 226.1 190 57.4
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 5.1e-57 224.9 190 56.3
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 5.1e-57 224.9 191 59.7
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 5.1e-57 224.9 190 58.4
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 8.6e-57 224.2 190 58.9
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 1.1e-56 223.8 190 57.4
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 3.3e-56 222.2 190 56.8
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 4.3e-56 221.9 183 59.6
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 4.3e-56 221.9 165 65.5
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.1e-55 219.5 183 61.7
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 2.8e-55 219.2 152 73.7
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 1.4e-54 216.9 165 66.7
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 1.4e-54 216.9 190 57.4
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 1.4e-54 216.9 190 55.3
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 2.6e-53 212.6 191 58.1
Actinidia02025 Actinidia chinensis HOM05D006617 ORTHO05D008247 7.5e-53 211.1 182 61.5
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 9.9e-53 210.7 190 54.7
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 2.4e-51 206.1 160 63.8
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 9.2e-51 204.1 160 63.8
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 2.7e-50 202.6 160 62.5
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 6.0e-50 201.4 181 57.5
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.3e-49 199.5 161 64.6
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 3.9e-49 198.7 146 65.8
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 3.9e-49 198.7 186 53.2
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.5e-48 196.8 161 64.6
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 2.5e-48 196.1 190 53.7
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 3.3e-48 195.7 161 64.0
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 2.4e-46 189.5 161 61.5
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 1.5e-45 186.8 161 60.9
Aqoxy7G00382 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 6.0e-42 174.9 134 64.9
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 6.2e-39 164.9 123 65.0
CARHR126330 Cardamine hirsuta HOM05D006617 ORTHO05D008247 1.8e-38 163.3 134 58.2
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 1.0e-33 147.5 127 60.6
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 1.1e-32 144.1 186 39.8
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 1.9e-32 143.3 190 44.7
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 2.6e-29 132.9 186 38.2
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 1.9e-27 126.7 183 38.8
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 2.4e-27 126.3 125 56.8
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 6.2e-23 111.7 79 67.1
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 1.4e-19 100.5 179 32.4
Glyma.05G087800 Glycine max HOM05D006617 ORTHO05D008247 8.7e-17 91.3 73 60.3
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 3.7e-15 85.9 191 30.4
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 6.2e-15 85.1 56 67.9
Pp3c8_19270 Physcomitrium patens HOM05D006617 ORTHO05D008247 6.9e-14 81.6 186 27.4
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 3.4e-13 79.3 56 62.5
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 1.9e-11 73.6 158 29.7
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 2.1e-10 70.1 79 49.4
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 6.1e-10 68.6 78 50.0
PRCOL_00003136 Prasinoderma coloniale HOM05D006617 ORTHO05D008247 3.9e-09 65.9 188 27.1
MD14G1098400 Malus domestica HOM05D006617 ORTHO05D008247 3.7e-07 59.3 69 47.8


User provided reference genes

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