Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.7e-41 170.6 78 100.0
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.0e-32 141.4 71 81.7
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.0e-32 141.0 76 77.6
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 4.0e-32 141.0 74 81.1
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.5e-31 139.0 73 78.1
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 5.7e-31 137.1 74 78.4
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 7.5e-31 136.7 76 72.4
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 7.5e-31 136.7 75 76.0
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.3e-30 136.0 74 73.0
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.7e-30 135.6 71 80.3
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.7e-30 135.6 71 80.3
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.7e-30 135.6 70 82.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.7e-30 135.6 74 75.7
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 2.2e-30 135.2 75 74.7
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.8e-30 134.8 76 77.6
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 4.8e-30 134.0 70 82.9
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 4.8e-30 134.0 70 78.6
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 6.3e-30 133.7 71 78.9
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 6.3e-30 133.7 71 78.9
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 6.3e-30 133.7 71 78.9
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 6.3e-30 133.7 74 74.3
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 6.3e-30 133.7 77 76.6
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 6.3e-30 133.7 71 80.3
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 8.3e-30 133.3 71 78.9
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 8.3e-30 133.3 70 80.0
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.1e-29 132.9 71 80.3
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.4e-29 132.5 75 72.0
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.8e-29 132.1 72 75.0
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 2.4e-29 131.7 75 72.0
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 2.4e-29 131.7 75 72.0
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 2.4e-29 131.7 76 69.7
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 2.4e-29 131.7 78 70.5
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 3.1e-29 131.3 71 76.1
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.1e-29 131.3 76 73.7
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 3.1e-29 131.3 73 76.7
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 4.1e-29 131.0 70 77.1
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 4.1e-29 131.0 71 77.5
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 5.4e-29 130.6 70 77.1
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 7.0e-29 130.2 74 74.3
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 7.0e-29 130.2 70 77.1
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 7.0e-29 130.2 70 71.4
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 9.1e-29 129.8 71 77.5
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.6e-28 129.0 72 79.2
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 3.5e-28 127.9 75 77.3
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 3.5e-28 127.9 69 75.4
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 4.5e-28 127.5 70 75.7
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 7.7e-28 126.7 71 73.2
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 7.7e-28 126.7 70 77.1
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.0e-27 126.3 69 73.9
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.3e-27 125.9 70 72.9
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.2e-27 125.2 69 73.9
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 2.9e-27 124.8 72 73.6
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 5.0e-27 124.0 70 75.7
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 5.0e-27 124.0 71 73.2
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 5.0e-27 124.0 70 68.6
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 5.0e-27 124.0 70 68.6
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.1e-26 122.9 73 69.9
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.1e-26 122.9 70 70.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.9e-26 122.1 70 74.3
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.9e-26 122.1 75 65.3
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 2.5e-26 121.7 73 68.5
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.2e-26 121.3 70 71.4
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 4.2e-26 120.9 73 69.9
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 5.5e-26 120.6 75 65.3
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.1e-25 118.6 56 92.9
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 9.1e-21 103.2 111 47.7
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 1.6e-20 102.4 49 91.8
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 5.0e-19 97.4 51 74.5
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.0e-19 97.4 51 74.5
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.0e-19 97.4 51 74.5
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 3.0e-16 88.2 76 48.7
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.0e-16 88.2 75 50.7
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.2e-15 86.3 75 49.3
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.5e-15 85.9 55 61.8
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 9.8e-15 83.2 82 41.5
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 2.1e-09 65.5 71 47.9
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 2.1e-09 65.5 92 37.0
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.5e-07 59.3 144 29.2


User provided reference genes

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