Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI17_g33112_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 5.1e-41 170.6 86 100.0
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.6e-29 131.7 110 66.4
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 6.7e-25 117.1 78 66.7
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 7.0e-22 107.1 78 66.7
MBI04_g04804_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 9.1e-22 106.7 58 87.9
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 2.7e-21 105.1 68 69.1
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 1.0e-20 103.2 77 64.9
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 5.0e-20 100.9 85 61.2
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 5.0e-20 100.9 85 61.2
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 6.5e-20 100.5 68 67.6
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 1.1e-19 99.8 84 61.9
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 1.9e-19 99.0 78 64.1
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 3.2e-19 98.2 77 61.0
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 3.2e-19 98.2 74 62.2
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 3.2e-19 98.2 74 62.2
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 3.2e-19 98.2 77 61.0
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 4.2e-19 97.8 77 62.3
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 4.2e-19 97.8 74 58.1
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 4.2e-19 97.8 74 60.8
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 9.4e-19 96.7 77 59.7
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 1.6e-18 95.9 78 61.5
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 2.1e-18 95.5 88 55.7
SalBow4G1355 Salvia bowleyana HOM05D000087 ORTHO05D005735 2.7e-18 95.1 64 65.6
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 6.1e-18 94.0 73 58.9
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 6.1e-18 94.0 75 57.3
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 1.0e-17 93.2 75 57.3
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 1.0e-17 93.2 76 53.9
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 1.4e-17 92.8 77 57.1
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 1.4e-17 92.8 83 55.4
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 1.8e-17 92.4 60 71.7
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 3.0e-17 91.7 59 71.2
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 6.8e-17 90.5 60 70.0
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 8.8e-17 90.1 57 71.9
vmacro08520 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 1.2e-16 89.7 77 51.9
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 2.0e-16 89.0 63 61.9
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 2.6e-16 88.6 60 66.7
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 3.4e-16 88.2 76 52.6
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 4.4e-16 87.8 83 57.8
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 7.5e-16 87.0 74 54.1
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 3.7e-15 84.7 78 52.6
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 4.8e-15 84.3 83 51.8
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 4.8e-15 84.3 83 50.6
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 6.3e-15 84.0 86 52.3
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 6.3e-15 84.0 63 60.3
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 8.3e-15 83.6 83 50.6
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 8.3e-15 83.6 83 50.6
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 8.3e-15 83.6 57 66.7
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.4e-14 82.8 78 51.3
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 1.4e-14 82.8 75 52.0
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.8e-14 82.4 83 49.4
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 2.4e-14 82.0 80 51.2
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 2.4e-14 82.0 85 48.2
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 2.4e-14 82.0 75 52.0
SEGI_26806 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 2.4e-14 82.0 59 64.4
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 3.1e-14 81.6 75 53.3
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 5.4e-14 80.9 80 50.0
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 7.0e-14 80.5 80 50.0
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 1.2e-13 79.7 73 52.1
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 1.2e-13 79.7 58 62.1
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 1.6e-13 79.3 85 47.1
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 1.6e-13 79.3 74 52.7
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 2.0e-13 79.0 60 61.7
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 2.7e-13 78.6 63 54.0
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 2.7e-13 78.6 63 54.0
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 4.5e-13 77.8 63 57.1
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 4.5e-13 77.8 63 57.1
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 5.9e-13 77.4 59 62.7
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 1.7e-12 75.9 74 51.4
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 3.8e-12 74.7 58 58.6
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 8.6e-12 73.6 58 56.9
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 1.1e-11 73.2 75 45.3
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 1.1e-11 73.2 75 45.3
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 1.9e-11 72.4 60 55.0
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 2.5e-11 72.0 69 52.2
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 3.3e-11 71.6 72 50.0
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 3.3e-11 71.6 80 48.8
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 4.2e-11 71.2 57 57.9
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 4.2e-11 71.2 60 55.0
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 7.2e-11 70.5 58 56.9
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 9.5e-11 70.1 57 56.1
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 9.5e-11 70.1 60 53.3
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 9.5e-11 70.1 75 45.3
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 1.2e-10 69.7 57 54.4
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 1.2e-10 69.7 57 54.4
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 2.8e-10 68.6 60 53.3
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 4.7e-10 67.8 57 54.4
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 6.1e-10 67.4 58 53.4
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 1.0e-09 66.6 60 50.0
MBI03_g46173_MAGBIO Magnolia biondii HOM05D037080 ORTHO05D241714 1.4e-09 66.2 39 87.2
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 5.2e-09 64.3 68 47.1
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 6.8e-09 63.9 58 50.0
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 3.7e-07 58.2 45 53.3


User provided reference genes

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